RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 TRBV7-3A0A075B6L6 115 aa14.61□□□□□ -0.07
SMPD3-201ENST00000219334 TMEM61Q8N0U2 210 aa14.61□□□□□ -0.07
SMPD3-201ENST00000219334 C9orf118A6NHY6 69 aa14.61□□□□□ -0.07
SMPD3-201ENST00000219334 NDUFA1O15239 70 aa14.61□□□□□ -0.07
SMPD3-201ENST00000219334 IGHV4-4A0A075B6R2 117 aa14.61□□□□□ -0.07
SMPD3-201ENST00000219334 TRAV12-1A0A0B4J245 112 aa14.61□□□□□ -0.07
SMPD3-201ENST00000219334 PATE2Q6UY27 113 aa14.61□□□□□ -0.07
SMPD3-201ENST00000219334 PPDPFLQ8WWR9 84 aa14.6□□□□□ -0.07
SMPD3-201ENST00000219334 WISP2O76076 250 aa14.6□□□□□ -0.07
SMPD3-201ENST00000219334 WNK1Q9H4A3 2382 aa14.6□□□□□ -0.07
SMPD3-201ENST00000219334 NDUFA11Q86Y39 141 aa14.59□□□□□ -0.07
SMPD3-201ENST00000219334 C9orf47Q6ZRZ4 202 aa14.59□□□□□ -0.07
SMPD3-201ENST00000219334 TIMM17AQ99595 171 aa14.59□□□□□ -0.07
SMPD3-201ENST00000219334 UBE2AP49459 152 aa14.59□□□□□ -0.07
SMPD3-201ENST00000219334 ZFP2Q6ZN57 461 aa14.59□□□□□ -0.07
SMPD3-201ENST00000219334 ZNF747Q9BV97 191 aa14.59□□□□□ -0.07
SMPD3-201ENST00000219334 C19orf84I3L1E1 186 aa14.58□□□□□ -0.07
SMPD3-201ENST00000219334 ORMDL1Q9P0S3 153 aa14.58□□□□□ -0.07
SMPD3-201ENST00000219334 PRSS47A8MTI9 375 aa14.58□□□□□ -0.08
SMPD3-201ENST00000219334 FUSP35637 526 aaKnown RBP eCLIP14.58□□□□□ -0.08
SMPD3-201ENST00000219334 LMO4P61968 165 aa14.58□□□□□ -0.08
SMPD3-201ENST00000219334 C4orf48Q5BLP8 95 aa14.58□□□□□ -0.08
SMPD3-201ENST00000219334 WFDC11Q8NEX6 87 aa14.57□□□□□ -0.08
SMPD3-201ENST00000219334 PRAC2D3DTV9 90 aa14.57□□□□□ -0.08
SMPD3-201ENST00000219334 FANCD2OSQ96PS1 177 aa14.57□□□□□ -0.08
SMPD3-201ENST00000219334 KLK12Q9UKR0 248 aa14.56□□□□□ -0.08
SMPD3-201ENST00000219334 MSMPQ1L6U9 139 aa14.56□□□□□ -0.08
SMPD3-201ENST00000219334 COX7B2Q8TF08 81 aa14.56□□□□□ -0.08
SMPD3-201ENST00000219334 VSIG2Q96IQ7 327 aa14.56□□□□□ -0.08
SMPD3-201ENST00000219334 PRO0255Q9UI72 69 aa14.56□□□□□ -0.08
SMPD3-201ENST00000219334 A0A0J9YXV3 536 aa14.56□□□□□ -0.08
SMPD3-201ENST00000219334 SIVA1O15304 175 aa14.56□□□□□ -0.08
SMPD3-201ENST00000219334 DEFB125Q8N687 156 aa14.56□□□□□ -0.08
SMPD3-201ENST00000219334 C11orf45Q8TAV5 145 aa14.56□□□□□ -0.08
SMPD3-201ENST00000219334 MSRB1Q9NZV6 116 aa14.55□□□□□ -0.08
SMPD3-201ENST00000219334 TMEM263Q8WUH6 116 aaKnown RBP14.55□□□□□ -0.08
SMPD3-201ENST00000219334 CFC1BP0CG36 223 aa14.55□□□□□ -0.08
SMPD3-201ENST00000219334 CFC1P0CG37 223 aa14.55□□□□□ -0.08
SMPD3-201ENST00000219334 IFITM1P13164 125 aa14.55□□□□□ -0.08
SMPD3-201ENST00000219334 INAFM1C9JVW0 142 aa14.55□□□□□ -0.08
SMPD3-201ENST00000219334 SND1-IT1Q9HBX3 110 aa14.55□□□□□ -0.08
SMPD3-201ENST00000219334 IGHV4-31P0DP07 118 aa14.55□□□□□ -0.08
SMPD3-201ENST00000219334 F8W1H4 67 aa14.54□□□□□ -0.08
SMPD3-201ENST00000219334 ETDBQ3ZM63 59 aa14.54□□□□□ -0.08
SMPD3-201ENST00000219334 ODF3L1Q8IXM7 274 aa14.54□□□□□ -0.08
SMPD3-201ENST00000219334 UNQ9165/PRO28630Q6UXU0 137 aa14.53□□□□□ -0.08
SMPD3-201ENST00000219334 MYO18BQ8IUG5 2567 aa14.53□□□□□ -0.08
SMPD3-201ENST00000219334 TRBV12-3P01733 135 aa14.53□□□□□ -0.08
SMPD3-201ENST00000219334 A0A0J9YX75 114 aa14.52□□□□□ -0.08
SMPD3-201ENST00000219334 MED14OSP0DP75 135 aa14.52□□□□□ -0.08
SMPD3-201ENST00000219334 C10orf91Q5T1B1 145 aa14.52□□□□□ -0.08
SMPD3-201ENST00000219334 MAP6D1Q9H9H5 199 aa14.52□□□□□ -0.09
SMPD3-201ENST00000219334 NACAE9PAV3 2078 aa14.52□□□□□ -0.09
SMPD3-201ENST00000219334 BAALC-AS2P0C853 105 aa14.52□□□□□ -0.09
SMPD3-201ENST00000219334 SPAG11BQ08648 103 aa14.52□□□□□ -0.09
SMPD3-201ENST00000219334 C9orf153Q5TBE3 101 aa14.52□□□□□ -0.09
SMPD3-201ENST00000219334 CXCL5P42830 114 aa14.51□□□□□ -0.09
SMPD3-201ENST00000219334 Q6YL49 198 aa14.51□□□□□ -0.09
SMPD3-201ENST00000219334 NDUFB1O75438 58 aa14.51□□□□□ -0.09
SMPD3-201ENST00000219334 C12orf74Q32Q52 190 aa14.51□□□□□ -0.09
SMPD3-201ENST00000219334 SHISA2Q6UWI4 295 aa14.51□□□□□ -0.09
SMPD3-201ENST00000219334 ZNF843Q8N446 348 aa14.51□□□□□ -0.09
SMPD3-201ENST00000219334 OPRPNQ99935 248 aaPredicted RBP14.51□□□□□ -0.09
SMPD3-201ENST00000219334 K7ERJ3 54 aa14.5□□□□□ -0.09
SMPD3-201ENST00000219334 C15orf53Q8NAA6 179 aa14.5□□□□□ -0.09
SMPD3-201ENST00000219334 NCKAP5O14513 1909 aa14.5□□□□□ -0.09
SMPD3-201ENST00000219334 DEFB1P60022 68 aa14.5□□□□□ -0.09
SMPD3-201ENST00000219334 H0YGX0 51 aa14.5□□□□□ -0.09
SMPD3-201ENST00000219334 RNF183Q96D59 192 aa14.5□□□□□ -0.09
SMPD3-201ENST00000219334 FAM167A-AS1Q96KT0 104 aa14.5□□□□□ -0.09
SMPD3-201ENST00000219334 SPANXDQ9BXN6 97 aa14.5□□□□□ -0.09
SMPD3-201ENST00000219334 LINC01545Q5VT33 79 aa14.49□□□□□ -0.09
SMPD3-201ENST00000219334 A0A1W2PPM0 123 aa14.49□□□□□ -0.09
SMPD3-201ENST00000219334 K7EP34 96 aa14.49□□□□□ -0.09
SMPD3-201ENST00000219334 ZNF124Q15973 351 aa14.49□□□□□ -0.09
SMPD3-201ENST00000219334 E7EUB6 86 aa14.48□□□□□ -0.09
SMPD3-201ENST00000219334 C14orf177Q52M58 125 aa14.48□□□□□ -0.09
SMPD3-201ENST00000219334 PRO3102Q9H379 93 aa14.48□□□□□ -0.09
SMPD3-201ENST00000219334 TRACP01848 142 aa14.48□□□□□ -0.09
SMPD3-201ENST00000219334 ODF3BA8MYP8 253 aa14.47□□□□□ -0.09
SMPD3-201ENST00000219334 H3BMG7 143 aa14.46□□□□□ -0.09
SMPD3-201ENST00000219334 HILS1P60008 231 aa14.46□□□□□ -0.09
SMPD3-201ENST00000219334 LYPD6BQ8NI32 183 aa14.46□□□□□ -0.09
SMPD3-201ENST00000219334 RPL39P62891 51 aaKnown RBP14.46□□□□□ -0.09
SMPD3-201ENST00000219334 Q6ZVH6 145 aa14.46□□□□□ -0.09
SMPD3-201ENST00000219334 TRBV10-1A0A0K0K1A3 114 aa14.46□□□□□ -0.09
SMPD3-201ENST00000219334 PROP1O75360 226 aa14.46□□□□□ -0.1
SMPD3-201ENST00000219334 NTN5Q8WTR8 489 aaPredicted RBP14.46□□□□□ -0.1
SMPD3-201ENST00000219334 LYPD6Q86Y78 171 aa14.45□□□□□ -0.1
SMPD3-201ENST00000219334 PCP2Q8IVA1 136 aa14.45□□□□□ -0.1
SMPD3-201ENST00000219334 MDFICQ9P1T7 246 aa14.45□□□□□ -0.1
SMPD3-201ENST00000219334 IGHV4-28A0A0C4DH34 117 aa14.45□□□□□ -0.1
SMPD3-201ENST00000219334 CCL25O15444 150 aa14.45□□□□□ -0.1
SMPD3-201ENST00000219334 PIEZO1Q92508 2521 aa14.45□□□□□ -0.1
SMPD3-201ENST00000219334 ANKRD29Q8N6D5 301 aa14.45□□□□□ -0.1
SMPD3-201ENST00000219334 SPATA25Q9BR10 227 aa14.44□□□□□ -0.1
SMPD3-201ENST00000219334 DENND4CQ5VZ89 1909 aa14.43□□□□□ -0.1
SMPD3-201ENST00000219334 NCR3O14931 201 aa14.43□□□□□ -0.1
SMPD3-201ENST00000219334 CRYBA4P53673 196 aa14.43□□□□□ -0.1
SMPD3-201ENST00000219334 CCDC140Q96MF4 163 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 1672.7 ms