RNA–Protein interactions for RNA: ENST00000641570.1

PHGDH-220, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,036 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-220ENST00000641570 DEFB130BP0DP73 79 aa9.34□□□□□ -0.91
PHGDH-220ENST00000641570 DEFB130AP0DP74 79 aa9.34□□□□□ -0.91
PHGDH-220ENST00000641570 GZMBP10144 247 aa9.34□□□□□ -0.91
PHGDH-220ENST00000641570 SSTP61278 116 aa9.34□□□□□ -0.91
PHGDH-220ENST00000641570 C10orf91Q5T1B1 145 aa9.34□□□□□ -0.91
PHGDH-220ENST00000641570 Q8NAQ8 132 aa9.34□□□□□ -0.91
PHGDH-220ENST00000641570 MDFICQ9P1T7 246 aa9.34□□□□□ -0.91
PHGDH-220ENST00000641570 HIGD1CA8MV81 97 aa9.33□□□□□ -0.92
PHGDH-220ENST00000641570 PRM2P04554 102 aa9.33□□□□□ -0.92
PHGDH-220ENST00000641570 S100A8P05109 93 aa9.33□□□□□ -0.92
PHGDH-220ENST00000641570 TRGC1P0CF51 173 aa9.33□□□□□ -0.92
PHGDH-220ENST00000641570 S100A1P23297 94 aa9.33□□□□□ -0.92
PHGDH-220ENST00000641570 DAZ2Q13117 558 aaKnown RBP9.33□□□□□ -0.92
PHGDH-220ENST00000641570 RIGQ13278 110 aa9.33□□□□□ -0.92
PHGDH-220ENST00000641570 LGALS9BQ3B8N2 356 aa9.33□□□□□ -0.92
PHGDH-220ENST00000641570 ZNF876PQ49A33 203 aa9.33□□□□□ -0.92
PHGDH-220ENST00000641570 FAM222AQ5U5X8 452 aa9.33□□□□□ -0.92
PHGDH-220ENST00000641570 C11orf45Q8TAV5 145 aa9.33□□□□□ -0.92
PHGDH-220ENST00000641570 PGLYRP4Q96LB8 373 aa9.33□□□□□ -0.92
PHGDH-220ENST00000641570 MRPL16Q9NX20 251 aaKnown RBP9.33□□□□□ -0.92
PHGDH-220ENST00000641570 V9GYV3 84 aa9.33□□□□□ -0.92
PHGDH-220ENST00000641570 GAGE12BA1L429 117 aa9.32□□□□□ -0.92
PHGDH-220ENST00000641570 C7orf77A4D0Y5 90 aa9.32□□□□□ -0.92
PHGDH-220ENST00000641570 GAGE7O76087 117 aa9.32□□□□□ -0.92
PHGDH-220ENST00000641570 OR5AL1P0C617 328 aa9.32□□□□□ -0.92
PHGDH-220ENST00000641570 GAGE12FP0CL80 117 aa9.32□□□□□ -0.92
PHGDH-220ENST00000641570 GAGE12GP0CL81 117 aa9.32□□□□□ -0.92
PHGDH-220ENST00000641570 GAGE12IP0CL82 117 aa9.32□□□□□ -0.92
PHGDH-220ENST00000641570 TWIST1Q15672 202 aa9.32□□□□□ -0.92
PHGDH-220ENST00000641570 DNLZQ5SXM8 178 aa9.32□□□□□ -0.92
PHGDH-220ENST00000641570 LYZL1Q6UWQ5 148 aa9.32□□□□□ -0.92
PHGDH-220ENST00000641570 IL17DQ8TAD2 202 aa9.32□□□□□ -0.92
PHGDH-220ENST00000641570 BTF3L4Q96K17 158 aa9.32□□□□□ -0.92
PHGDH-220ENST00000641570 AP1S3Q96PC3 154 aa9.32□□□□□ -0.92
PHGDH-220ENST00000641570 NDUFAF3Q9BU61 184 aa9.32□□□□□ -0.92
PHGDH-220ENST00000641570 A0A087WWC5 75 aa9.31□□□□□ -0.92
PHGDH-220ENST00000641570 C11orf72Q8NBR9 251 aa9.31□□□□□ -0.92
PHGDH-220ENST00000641570 OR4C5Q8NGB2 326 aa9.31□□□□□ -0.92
PHGDH-220ENST00000641570 C9orf85Q96MD7 179 aa9.31□□□□□ -0.92
PHGDH-220ENST00000641570 MUC21A0A0G2JKD1 596 aa9.3□□□□□ -0.92
PHGDH-220ENST00000641570 MUC21A0A140T8X8 626 aa9.3□□□□□ -0.92
PHGDH-220ENST00000641570 A0A1B0GUT8 65 aa9.3□□□□□ -0.92
PHGDH-220ENST00000641570 A8MWV9 139 aa9.3□□□□□ -0.92
PHGDH-220ENST00000641570 SNAI2O43623 268 aa9.3□□□□□ -0.92
PHGDH-220ENST00000641570 SPINK4O60575 86 aa9.3□□□□□ -0.92
PHGDH-220ENST00000641570 RNASE3P12724 160 aaKnown RBP9.3□□□□□ -0.92
PHGDH-220ENST00000641570 IMMP2LQ96T52 175 aa9.3□□□□□ -0.92
PHGDH-220ENST00000641570 DKK2Q9UBU2 259 aa9.3□□□□□ -0.92
PHGDH-220ENST00000641570 A0A1B0GW15 77 aa9.29□□□□□ -0.92
PHGDH-220ENST00000641570 SMIM27A0A1W2PRY6 76 aa9.29□□□□□ -0.92
PHGDH-220ENST00000641570 RHODO00212 210 aa9.29□□□□□ -0.92
PHGDH-220ENST00000641570 ATP6V1G1O75348 118 aa9.29□□□□□ -0.92
PHGDH-220ENST00000641570 IGLC6P0CF74 106 aa9.29□□□□□ -0.92
PHGDH-220ENST00000641570 HTN3P15516 51 aa9.29□□□□□ -0.92
PHGDH-220ENST00000641570 CTRLP40313 264 aa9.29□□□□□ -0.92
PHGDH-220ENST00000641570 FAM74A4Q5TZK3 123 aa9.29□□□□□ -0.92
PHGDH-220ENST00000641570 OR10AG1Q8NH19 301 aa9.29□□□□□ -0.92
PHGDH-220ENST00000641570 TMEM242Q9NWH2 141 aa9.29□□□□□ -0.92
PHGDH-220ENST00000641570 TRGV4A0A0C4DH28 118 aa9.28□□□□□ -0.92
PHGDH-220ENST00000641570 CIDEAO60543 219 aa9.28□□□□□ -0.92
PHGDH-220ENST00000641570 ATP5G1P05496 136 aa9.28□□□□□ -0.92
PHGDH-220ENST00000641570 RAB4BP61018 213 aa9.28□□□□□ -0.92
PHGDH-220ENST00000641570 PIK3CD-AS1Q5SR53 167 aa9.28□□□□□ -0.92
PHGDH-220ENST00000641570 WDR73Q6P4I2 378 aa9.28□□□□□ -0.92
PHGDH-220ENST00000641570 Q6ZTI0 123 aa9.28□□□□□ -0.92
PHGDH-220ENST00000641570 NUP35Q8NFH5 326 aa9.28□□□□□ -0.92
PHGDH-220ENST00000641570 PTH2Q96A98 100 aa9.28□□□□□ -0.92
PHGDH-220ENST00000641570 URGCP-MRPS24S4R325 110 aa9.28□□□□□ -0.92
PHGDH-220ENST00000641570 TRAV9-1A0A075B6T8 112 aa9.27□□□□□ -0.93
PHGDH-220ENST00000641570 TRAV4A0A0B4J268 109 aa9.27□□□□□ -0.93
PHGDH-220ENST00000641570 F5H697 171 aa9.27□□□□□ -0.93
PHGDH-220ENST00000641570 IGHV3-53P01767 116 aa9.27□□□□□ -0.93
PHGDH-220ENST00000641570 MGPP08493 103 aa9.27□□□□□ -0.93
PHGDH-220ENST00000641570 HBBP68871 147 aa9.27□□□□□ -0.93
PHGDH-220ENST00000641570 ZNF56Q15929 161 aa9.27□□□□□ -0.93
PHGDH-220ENST00000641570 MRPL54Q6P161 138 aaKnown RBP9.27□□□□□ -0.93
PHGDH-220ENST00000641570 ATP5L2Q7Z4Y8 100 aa9.27□□□□□ -0.93
PHGDH-220ENST00000641570 GTSF1Q8WW33 167 aa9.27□□□□□ -0.93
PHGDH-220ENST00000641570 RASL10AQ92737 203 aa9.27□□□□□ -0.93
PHGDH-220ENST00000641570 SSBP4Q9BWG4 385 aaPredicted RBP9.27□□□□□ -0.93
PHGDH-220ENST00000641570 SCRT2Q9NQ03 307 aa9.27□□□□□ -0.93
PHGDH-220ENST00000641570 SMCO4Q9NRQ5 59 aa9.27□□□□□ -0.93
PHGDH-220ENST00000641570 NTF3P20783 257 aa9.26□□□□□ -0.93
PHGDH-220ENST00000641570 CAMPP49913 170 aa9.26□□□□□ -0.93
PHGDH-220ENST00000641570 FAM3BP58499 235 aaPredicted RBP9.26□□□□□ -0.93
PHGDH-220ENST00000641570 NANOS2P60321 138 aaKnown RBP9.26□□□□□ -0.93
PHGDH-220ENST00000641570 SLAQ13239 276 aa9.26□□□□□ -0.93
PHGDH-220ENST00000641570 DMRTA1Q5VZB9 504 aa9.26□□□□□ -0.93
PHGDH-220ENST00000641570 CELA1Q9UNI1 258 aa9.26□□□□□ -0.93
PHGDH-220ENST00000641570 TRAV10A0A0B4J240 114 aa9.25□□□□□ -0.93
PHGDH-220ENST00000641570 PLAC8L1A1L4L8 177 aa9.25□□□□□ -0.93
PHGDH-220ENST00000641570 F5H768 121 aa9.25□□□□□ -0.93
PHGDH-220ENST00000641570 FOXA3P55318 350 aaPredicted RBP9.25□□□□□ -0.93
PHGDH-220ENST00000641570 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.25□□□□□ -0.93
PHGDH-220ENST00000641570 DPH3P1Q9H4G8 78 aa9.25□□□□□ -0.93
PHGDH-220ENST00000641570 A0A087WWL8 130 aa9.24□□□□□ -0.93
PHGDH-220ENST00000641570 IGHV3-73A0A0B4J1V6 119 aa9.24□□□□□ -0.93
PHGDH-220ENST00000641570 H7C1H1 209 aa9.24□□□□□ -0.93
PHGDH-220ENST00000641570 COX19Q49B96 90 aa9.24□□□□□ -0.93
PHGDH-220ENST00000641570 C14orf178Q8N769 122 aaPredicted RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 126.6 ms