RNA–Protein interactions for RNA: ENST00000615513.4

CDKN1A-208, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDKN1A, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-208ENST00000615513 FAM208BQ5VWN6 2430 aa11.06□□□□□ -0.64
CDKN1A-208ENST00000615513 USP9YO00507 2555 aaPredicted RBP11.06□□□□□ -0.64
CDKN1A-208ENST00000615513 FBN2P35556 2912 aa11.06□□□□□ -0.64
CDKN1A-208ENST00000615513 TRAV8-6A0A0B4J262 113 aa11.06□□□□□ -0.64
CDKN1A-208ENST00000615513 K7EMI3 77 aa11.06□□□□□ -0.64
CDKN1A-208ENST00000615513 GNRH2O43555 120 aa11.06□□□□□ -0.64
CDKN1A-208ENST00000615513 SNRPD3P62318 126 aaKnown RBP11.06□□□□□ -0.64
CDKN1A-208ENST00000615513 Q5PR19 223 aa11.06□□□□□ -0.64
CDKN1A-208ENST00000615513 WFDC3Q8IUB2 231 aa11.06□□□□□ -0.64
CDKN1A-208ENST00000615513 BOD1L2Q8IYS8 172 aa11.06□□□□□ -0.64
CDKN1A-208ENST00000615513 AP1S3Q96PC3 154 aa11.06□□□□□ -0.64
CDKN1A-208ENST00000615513 MAP1AP78559 2803 aaPredicted RBP11.06□□□□□ -0.64
CDKN1A-208ENST00000615513 ZFYVE26Q68DK2 2539 aa11.06□□□□□ -0.64
CDKN1A-208ENST00000615513 C7orf71A4D174 169 aa11.05□□□□□ -0.64
CDKN1A-208ENST00000615513 K7EQG2 157 aa11.05□□□□□ -0.64
CDKN1A-208ENST00000615513 OCIAD2Q56VL3 154 aa11.05□□□□□ -0.64
CDKN1A-208ENST00000615513 FAM159AQ6UWV7 190 aa11.05□□□□□ -0.64
CDKN1A-208ENST00000615513 DKK2Q9UBU2 259 aa11.05□□□□□ -0.64
CDKN1A-208ENST00000615513 UTP20O75691 2785 aaKnown RBP11.05□□□□□ -0.64
CDKN1A-208ENST00000615513 HOXA3O43365 443 aaPredicted RBP11.05□□□□□ -0.64
CDKN1A-208ENST00000615513 PPP1R17O96001 155 aa11.05□□□□□ -0.64
CDKN1A-208ENST00000615513 PRSS1P07477 247 aa11.05□□□□□ -0.64
CDKN1A-208ENST00000615513 C14orf178Q8N769 122 aaPredicted RBP11.05□□□□□ -0.64
CDKN1A-208ENST00000615513 POM121L12Q8N7R1 296 aa11.05□□□□□ -0.64
CDKN1A-208ENST00000615513 SELENOKQ9Y6D0 94 aa11.05□□□□□ -0.64
CDKN1A-208ENST00000615513 LRRK2Q5S007 2527 aa11.04□□□□□ -0.64
CDKN1A-208ENST00000615513 SIVA1O15304 175 aa11.04□□□□□ -0.64
CDKN1A-208ENST00000615513 SUMO2P61956 95 aaKnown RBP11.04□□□□□ -0.64
CDKN1A-208ENST00000615513 OR9G4Q8NGQ1 327 aa11.04□□□□□ -0.64
CDKN1A-208ENST00000615513 RASL10AQ92737 203 aa11.04□□□□□ -0.64
CDKN1A-208ENST00000615513 IGHV4OR15-8A0A075B7B6 117 aa11.03□□□□□ -0.64
CDKN1A-208ENST00000615513 A0A087WW49 117 aa11.03□□□□□ -0.64
CDKN1A-208ENST00000615513 A0A0J9YX75 114 aa11.03□□□□□ -0.64
CDKN1A-208ENST00000615513 ZNF688P0C7X2 276 aa11.03□□□□□ -0.64
CDKN1A-208ENST00000615513 SYNJ2BPP57105 145 aa11.03□□□□□ -0.64
CDKN1A-208ENST00000615513 ORMDL2Q53FV1 153 aa11.03□□□□□ -0.64
CDKN1A-208ENST00000615513 Q8N2B8 174 aa11.03□□□□□ -0.64
CDKN1A-208ENST00000615513 COTL1Q14019 142 aa11.03□□□□□ -0.64
CDKN1A-208ENST00000615513 PRRC2AP48634 2157 aaKnown RBP11.02□□□□□ -0.64
CDKN1A-208ENST00000615513 A6NDN8 102 aa11.02□□□□□ -0.64
CDKN1A-208ENST00000615513 IGKCP01834 107 aa11.02□□□□□ -0.64
CDKN1A-208ENST00000615513 HOXD3P31249 432 aaPredicted RBP11.02□□□□□ -0.64
CDKN1A-208ENST00000615513 FOXC2Q99958 501 aa11.02□□□□□ -0.64
CDKN1A-208ENST00000615513 CSMD2Q7Z408 3487 aa11.02□□□□□ -0.65
CDKN1A-208ENST00000615513 GAGE12BA1L429 117 aa11.02□□□□□ -0.65
CDKN1A-208ENST00000615513 H3BRM9 83 aa11.02□□□□□ -0.65
CDKN1A-208ENST00000615513 SPRY2O43597 315 aa11.02□□□□□ -0.65
CDKN1A-208ENST00000615513 VPS25Q9BRG1 176 aa11.02□□□□□ -0.65
CDKN1A-208ENST00000615513 HHLA3Q9XRX5 114 aa11.02□□□□□ -0.65
CDKN1A-208ENST00000615513 CR1P17927 2039 aa11.01□□□□□ -0.65
CDKN1A-208ENST00000615513 GAGE10A6NGK3 116 aa11.01□□□□□ -0.65
CDKN1A-208ENST00000615513 DPM2O94777 84 aa11.01□□□□□ -0.65
CDKN1A-208ENST00000615513 Q96MF0 132 aa11.01□□□□□ -0.65
CDKN1A-208ENST00000615513 KIF25-AS1Q9Y6Z4 181 aa11.01□□□□□ -0.65
CDKN1A-208ENST00000615513 TRAV12-3A0A0B4J271 114 aa11□□□□□ -0.65
CDKN1A-208ENST00000615513 DUSP14O95147 198 aaKnown RBP11□□□□□ -0.65
CDKN1A-208ENST00000615513 MGPP08493 103 aa11□□□□□ -0.65
CDKN1A-208ENST00000615513 HSD52Q0P140 79 aa11□□□□□ -0.65
CDKN1A-208ENST00000615513 PTPN13Q12923 2485 aa11□□□□□ -0.65
CDKN1A-208ENST00000615513 POLQO75417 2590 aa11□□□□□ -0.65
CDKN1A-208ENST00000615513 C9orf118A6NHY6 69 aa11□□□□□ -0.65
CDKN1A-208ENST00000615513 CD7P09564 240 aa11□□□□□ -0.65
CDKN1A-208ENST00000615513 RPL32P62910 135 aaKnown RBP11□□□□□ -0.65
CDKN1A-208ENST00000615513 RPL39LQ96EH5 51 aaKnown RBP11□□□□□ -0.65
CDKN1A-208ENST00000615513 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.99□□□□□ -0.65
CDKN1A-208ENST00000615513 LINC00315P59091 139 aa10.99□□□□□ -0.65
CDKN1A-208ENST00000615513 GTF2H5Q6ZYL4 71 aa10.99□□□□□ -0.65
CDKN1A-208ENST00000615513 TOMM6Q96B49 74 aa10.99□□□□□ -0.65
CDKN1A-208ENST00000615513 A0A087WX48 190 aa10.99□□□□□ -0.65
CDKN1A-208ENST00000615513 TRAV12-1A0A0B4J245 112 aa10.99□□□□□ -0.65
CDKN1A-208ENST00000615513 K7ERU9 68 aa10.99□□□□□ -0.65
CDKN1A-208ENST00000615513 NMUP48645 174 aa10.99□□□□□ -0.65
CDKN1A-208ENST00000615513 FOXI2Q6ZQN5 318 aa10.99□□□□□ -0.65
CDKN1A-208ENST00000615513 KRTAP1-3Q8IUG1 177 aa10.99□□□□□ -0.65
CDKN1A-208ENST00000615513 NAV2Q8IVL1 2488 aa10.99□□□□□ -0.65
CDKN1A-208ENST00000615513 HLA-DRB4P13762 266 aa10.98□□□□□ -0.65
CDKN1A-208ENST00000615513 C9orf85Q96MD7 179 aa10.98□□□□□ -0.65
CDKN1A-208ENST00000615513 HLA-DRB4X5D2U9 266 aa10.98□□□□□ -0.65
CDKN1A-208ENST00000615513 IGHV3-16A0A0C4DH30 117 aa10.97□□□□□ -0.65
CDKN1A-208ENST00000615513 TCTAP57738 103 aa10.97□□□□□ -0.65
CDKN1A-208ENST00000615513 TCTEX1D4Q5JR98 221 aa10.97□□□□□ -0.65
CDKN1A-208ENST00000615513 UFSP1Q6NVU6 142 aa10.97□□□□□ -0.65
CDKN1A-208ENST00000615513 PCP2Q8IVA1 136 aa10.97□□□□□ -0.65
CDKN1A-208ENST00000615513 TEX29Q8N6K0 151 aa10.97□□□□□ -0.65
CDKN1A-208ENST00000615513 WFDC12Q8WWY7 111 aa10.97□□□□□ -0.65
CDKN1A-208ENST00000615513 MRPL35Q9NZE8 188 aaKnown RBP10.97□□□□□ -0.65
CDKN1A-208ENST00000615513 PLNP26678 52 aa10.97□□□□□ -0.65
CDKN1A-208ENST00000615513 ADAMTSL5Q6ZMM2 481 aa10.97□□□□□ -0.65
CDKN1A-208ENST00000615513 TMEM86BQ8N661 226 aa10.97□□□□□ -0.65
CDKN1A-208ENST00000615513 DUX5Q96PT3 197 aa10.97□□□□□ -0.65
CDKN1A-208ENST00000615513 LINC01549A6NIU2 74 aa10.96□□□□□ -0.65
CDKN1A-208ENST00000615513 H3BUT2 72 aa10.96□□□□□ -0.65
CDKN1A-208ENST00000615513 ZC2HC1BQ5TFG8 222 aa10.96□□□□□ -0.65
CDKN1A-208ENST00000615513 SCGB3A1Q96QR1 104 aa10.96□□□□□ -0.65
CDKN1A-208ENST00000615513 ZANQ9Y493 2812 aa10.96□□□□□ -0.65
CDKN1A-208ENST00000615513 CREBBPQ92793 2442 aa10.96□□□□□ -0.66
CDKN1A-208ENST00000615513 IGHV1OR15-1A0A075B7D0 117 aa10.96□□□□□ -0.66
CDKN1A-208ENST00000615513 TRAV2A0A0B4J234 112 aa10.96□□□□□ -0.66
CDKN1A-208ENST00000615513 LINC01619G3V211 115 aa10.96□□□□□ -0.66
CDKN1A-208ENST00000615513 SYT8Q8NBV8 401 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms