RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 UBE2CO00762 179 aa8.29□□□□□ -1.08
SLIRP-212ENST00000613856 OR5AL1P0C617 328 aa8.29□□□□□ -1.08
SLIRP-212ENST00000613856 FAM3BP58499 235 aaPredicted RBP8.29□□□□□ -1.08
SLIRP-212ENST00000613856 ZNF705AQ6ZN79 300 aaPredicted RBP8.29□□□□□ -1.08
SLIRP-212ENST00000613856 ATP5L2Q7Z4Y8 100 aa8.29□□□□□ -1.08
SLIRP-212ENST00000613856 SSBP4Q9BWG4 385 aaPredicted RBP8.29□□□□□ -1.08
SLIRP-212ENST00000613856 IGHV3-16A0A0C4DH30 117 aa8.28□□□□□ -1.08
SLIRP-212ENST00000613856 COLCA2A8K830 154 aa8.28□□□□□ -1.08
SLIRP-212ENST00000613856 F2Z2F3 143 aa8.28□□□□□ -1.08
SLIRP-212ENST00000613856 WDR73Q6P4I2 378 aa8.28□□□□□ -1.08
SLIRP-212ENST00000613856 PGLYRP4Q96LB8 373 aa8.28□□□□□ -1.08
SLIRP-212ENST00000613856 LINC01587Q99440 93 aa8.28□□□□□ -1.08
SLIRP-212ENST00000613856 TMEM208Q9BTX3 173 aa8.28□□□□□ -1.08
SLIRP-212ENST00000613856 SCRT2Q9NQ03 307 aa8.28□□□□□ -1.08
SLIRP-212ENST00000613856 TP53TG3Q9ULZ0 132 aa8.28□□□□□ -1.08
SLIRP-212ENST00000613856 TGIF2-C20orf24A0A0A6YYL0 155 aa8.27□□□□□ -1.09
SLIRP-212ENST00000613856 A0A1B0GUT8 65 aa8.27□□□□□ -1.09
SLIRP-212ENST00000613856 A0A1B0GW15 77 aa8.27□□□□□ -1.09
SLIRP-212ENST00000613856 A0A1B0GXF2 115 aa8.27□□□□□ -1.09
SLIRP-212ENST00000613856 CBY3A6NI87 242 aa8.27□□□□□ -1.09
SLIRP-212ENST00000613856 H3BVH4 76 aa8.27□□□□□ -1.09
SLIRP-212ENST00000613856 GNRH2O43555 120 aa8.27□□□□□ -1.09
SLIRP-212ENST00000613856 RNASE3P12724 160 aaKnown RBP8.27□□□□□ -1.09
SLIRP-212ENST00000613856 S100A4P26447 101 aaKnown RBP8.27□□□□□ -1.09
SLIRP-212ENST00000613856 RASL11AQ6T310 242 aa8.27□□□□□ -1.09
SLIRP-212ENST00000613856 LYZL1Q6UWQ5 148 aa8.27□□□□□ -1.09
SLIRP-212ENST00000613856 BORCS7Q96B45 105 aa8.27□□□□□ -1.09
SLIRP-212ENST00000613856 C9orf85Q96MD7 179 aa8.27□□□□□ -1.09
SLIRP-212ENST00000613856 MUC4Q99102 2169 aa8.27□□□□□ -1.09
SLIRP-212ENST00000613856 IGHV4-4A0A075B6R2 117 aa8.26□□□□□ -1.09
SLIRP-212ENST00000613856 NXPH4O95158 308 aa8.26□□□□□ -1.09
SLIRP-212ENST00000613856 ARMS2P0C7Q2 107 aa8.26□□□□□ -1.09
SLIRP-212ENST00000613856 CACNG7P62955 275 aa8.26□□□□□ -1.09
SLIRP-212ENST00000613856 ZNF415Q09FC8 603 aa8.26□□□□□ -1.09
SLIRP-212ENST00000613856 RIGQ13278 110 aa8.26□□□□□ -1.09
SLIRP-212ENST00000613856 COX19Q49B96 90 aa8.26□□□□□ -1.09
SLIRP-212ENST00000613856 Q6ZWC4 215 aa8.26□□□□□ -1.09
SLIRP-212ENST00000613856 FAM210BQ96KR6 192 aa8.26□□□□□ -1.09
SLIRP-212ENST00000613856 FRAS1Q86XX4 4008 aa8.25□□□□□ -1.09
SLIRP-212ENST00000613856 S100A8P05109 93 aa8.25□□□□□ -1.09
SLIRP-212ENST00000613856 FRMD6-AS1P0C7T7 363 aa8.25□□□□□ -1.09
SLIRP-212ENST00000613856 HBBP68871 147 aa8.25□□□□□ -1.09
SLIRP-212ENST00000613856 MRPL54Q6P161 138 aaKnown RBP8.25□□□□□ -1.09
SLIRP-212ENST00000613856 ZNF493Q6ZR52 646 aa8.25□□□□□ -1.09
SLIRP-212ENST00000613856 GATD1Q8NB37 220 aa8.25□□□□□ -1.09
SLIRP-212ENST00000613856 C11orf72Q8NBR9 251 aa8.25□□□□□ -1.09
SLIRP-212ENST00000613856 IL17DQ8TAD2 202 aa8.25□□□□□ -1.09
SLIRP-212ENST00000613856 RNASE8Q8TDE3 154 aaKnown RBP8.25□□□□□ -1.09
SLIRP-212ENST00000613856 TMEM263Q8WUH6 116 aaKnown RBP8.25□□□□□ -1.09
SLIRP-212ENST00000613856 TPPP3Q9BW30 176 aa8.25□□□□□ -1.09
SLIRP-212ENST00000613856 MDFICQ9P1T7 246 aa8.25□□□□□ -1.09
SLIRP-212ENST00000613856 IGHV3OR16-12A0A075B7B8 117 aa8.24□□□□□ -1.09
SLIRP-212ENST00000613856 SMIM9A6NGZ8 99 aa8.24□□□□□ -1.09
SLIRP-212ENST00000613856 RAB5AP20339 215 aa8.24□□□□□ -1.09
SLIRP-212ENST00000613856 ZFP82Q8N141 532 aa8.24□□□□□ -1.09
SLIRP-212ENST00000613856 OR10AG1Q8NH19 301 aa8.24□□□□□ -1.09
SLIRP-212ENST00000613856 PTH2Q96A98 100 aa8.24□□□□□ -1.09
SLIRP-212ENST00000613856 C16orf74Q96GX8 76 aa8.24□□□□□ -1.09
SLIRP-212ENST00000613856 TP53TG1Q9Y2A0 90 aa8.24□□□□□ -1.09
SLIRP-212ENST00000613856 PHLDA3Q9Y5J5 127 aa8.24□□□□□ -1.09
SLIRP-212ENST00000613856 HERC2O95714 4834 aa8.24□□□□□ -1.09
SLIRP-212ENST00000613856 SPINK4O60575 86 aa8.23□□□□□ -1.09
SLIRP-212ENST00000613856 MT-ND6P03923 174 aa8.23□□□□□ -1.09
SLIRP-212ENST00000613856 RRN3P1Q2M238 152 aa8.23□□□□□ -1.09
SLIRP-212ENST00000613856 DEFB135Q30KP9 77 aa8.23□□□□□ -1.09
SLIRP-212ENST00000613856 PIK3CD-AS1Q5SR53 167 aa8.23□□□□□ -1.09
SLIRP-212ENST00000613856 RNF183Q96D59 192 aa8.23□□□□□ -1.09
SLIRP-212ENST00000613856 SPXQ9BT56 116 aa8.23□□□□□ -1.09
SLIRP-212ENST00000613856 NDUFAF3Q9BU61 184 aa8.23□□□□□ -1.09
SLIRP-212ENST00000613856 GNB1LQ9BYB4 327 aa8.23□□□□□ -1.09
SLIRP-212ENST00000613856 X6R8D5 127 aa8.23□□□□□ -1.09
SLIRP-212ENST00000613856 PLECQ15149 4684 aaKnown RBP8.23□□□□□ -1.09
SLIRP-212ENST00000613856 PCLOQ9Y6V0 5065 aa8.22□□□□□ -1.09
SLIRP-212ENST00000613856 SPRY2O43597 315 aa8.22□□□□□ -1.09
SLIRP-212ENST00000613856 HLA-DQA1P01909 254 aa8.22□□□□□ -1.09
SLIRP-212ENST00000613856 HTN1P15515 57 aa8.22□□□□□ -1.09
SLIRP-212ENST00000613856 AZU1P20160 251 aa8.22□□□□□ -1.09
SLIRP-212ENST00000613856 NTF3P20783 257 aa8.22□□□□□ -1.09
SLIRP-212ENST00000613856 SPANXN1Q5VSR9 72 aa8.22□□□□□ -1.09
SLIRP-212ENST00000613856 TMEM136Q6ZRR5 245 aa8.22□□□□□ -1.09
SLIRP-212ENST00000613856 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.22□□□□□ -1.09
SLIRP-212ENST00000613856 SYT8Q8NBV8 401 aa8.22□□□□□ -1.09
SLIRP-212ENST00000613856 EDA2RQ9HAV5 297 aa8.22□□□□□ -1.09
SLIRP-212ENST00000613856 TIMM8BQ9Y5J9 83 aaPredicted RBP8.22□□□□□ -1.09
SLIRP-212ENST00000613856 MUC21A0A0G2JKD1 596 aa8.21□□□□□ -1.1
SLIRP-212ENST00000613856 MUC21A0A140T8X8 626 aa8.21□□□□□ -1.1
SLIRP-212ENST00000613856 PLAC8L1A1L4L8 177 aa8.21□□□□□ -1.1
SLIRP-212ENST00000613856 SNURFLB1AK76 121 aa8.21□□□□□ -1.1
SLIRP-212ENST00000613856 M0R2P5 195 aa8.21□□□□□ -1.1
SLIRP-212ENST00000613856 PRM2P04554 102 aa8.21□□□□□ -1.1
SLIRP-212ENST00000613856 CAMPP49913 170 aa8.21□□□□□ -1.1
SLIRP-212ENST00000613856 DAZ2Q13117 558 aaKnown RBP8.21□□□□□ -1.1
SLIRP-212ENST00000613856 TWIST1Q15672 202 aa8.21□□□□□ -1.1
SLIRP-212ENST00000613856 GSN-AS1Q9NRJ2 163 aa8.21□□□□□ -1.1
SLIRP-212ENST00000613856 M0R381 172 aa8.2□□□□□ -1.1
SLIRP-212ENST00000613856 TRGC1P0CF51 173 aa8.2□□□□□ -1.1
SLIRP-212ENST00000613856 MIFP14174 115 aa8.2□□□□□ -1.1
SLIRP-212ENST00000613856 RPS10P46783 165 aaKnown RBP8.2□□□□□ -1.1
SLIRP-212ENST00000613856 DMRTA1Q5VZB9 504 aa8.2□□□□□ -1.1
SLIRP-212ENST00000613856 OR11H2Q8NH07 326 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms