RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 MUC21A0A0G2JKD1 596 aa6.57□□□□□ -1.36
CCDC47-207ENST00000612558 MUC21A0A140T8X8 626 aa6.57□□□□□ -1.36
CCDC47-207ENST00000612558 H3BS24 57 aa6.57□□□□□ -1.36
CCDC47-207ENST00000612558 S100A4P26447 101 aaKnown RBP6.57□□□□□ -1.36
CCDC47-207ENST00000612558 ASIPP42127 132 aa6.57□□□□□ -1.36
CCDC47-207ENST00000612558 INSL3P51460 131 aa6.57□□□□□ -1.36
CCDC47-207ENST00000612558 LINC00310P59036 64 aa6.57□□□□□ -1.36
CCDC47-207ENST00000612558 CACNG7P62955 275 aa6.57□□□□□ -1.36
CCDC47-207ENST00000612558 TDRG1Q3Y452 100 aa6.57□□□□□ -1.36
CCDC47-207ENST00000612558 OR10J3Q5JRS4 329 aa6.57□□□□□ -1.36
CCDC47-207ENST00000612558 HIST3H2BBQ8N257 126 aa6.57□□□□□ -1.36
CCDC47-207ENST00000612558 IGHV4-4A0A075B6R2 117 aa6.57□□□□□ -1.36
CCDC47-207ENST00000612558 LOC102724200A0A096LPH7 203 aaPredicted RBP6.57□□□□□ -1.36
CCDC47-207ENST00000612558 H3BVH4 76 aa6.57□□□□□ -1.36
CCDC47-207ENST00000612558 GNRH2O43555 120 aa6.57□□□□□ -1.36
CCDC47-207ENST00000612558 S100A2P29034 98 aa6.57□□□□□ -1.36
CCDC47-207ENST00000612558 BEAN1Q3B7T3 259 aa6.57□□□□□ -1.36
CCDC47-207ENST00000612558 ALKBH7Q9BT30 221 aaPredicted RBP6.57□□□□□ -1.36
CCDC47-207ENST00000612558 TMEM191AQ9H0A3 160 aa6.57□□□□□ -1.36
CCDC47-207ENST00000612558 RBMY1BA6NDE4 496 aaKnown RBP6.56□□□□□ -1.36
CCDC47-207ENST00000612558 RBMY1EA6NEQ0 496 aaKnown RBP6.56□□□□□ -1.36
CCDC47-207ENST00000612558 CRXO43186 299 aaPredicted RBP6.56□□□□□ -1.36
CCDC47-207ENST00000612558 RBMY1DP0C7P1 496 aaKnown RBP6.56□□□□□ -1.36
CCDC47-207ENST00000612558 AKR1D1P51857 326 aa6.56□□□□□ -1.36
CCDC47-207ENST00000612558 KRTAP24-1Q3LI83 254 aa6.56□□□□□ -1.36
CCDC47-207ENST00000612558 C9orf66Q5T8R8 295 aa6.56□□□□□ -1.36
CCDC47-207ENST00000612558 SPANXN1Q5VSR9 72 aa6.56□□□□□ -1.36
CCDC47-207ENST00000612558 FAM104BQ5XKR9 115 aa6.56□□□□□ -1.36
CCDC47-207ENST00000612558 BAGE3Q86Y29 109 aa6.56□□□□□ -1.36
CCDC47-207ENST00000612558 STHQ8IWL8 128 aa6.56□□□□□ -1.36
CCDC47-207ENST00000612558 TMEM256Q8N2U0 113 aa6.56□□□□□ -1.36
CCDC47-207ENST00000612558 OR10AG1Q8NH19 301 aa6.56□□□□□ -1.36
CCDC47-207ENST00000612558 SCRT2Q9NQ03 307 aa6.56□□□□□ -1.36
CCDC47-207ENST00000612558 MSRB1Q9NZV6 116 aa6.56□□□□□ -1.36
CCDC47-207ENST00000612558 TENM1Q9UKZ4 2725 aa6.56□□□□□ -1.36
CCDC47-207ENST00000612558 IGHV1OR15-1A0A075B7D0 117 aa6.55□□□□□ -1.36
CCDC47-207ENST00000612558 IFITM10A6NMD0 228 aa6.55□□□□□ -1.36
CCDC47-207ENST00000612558 CD7P09564 240 aa6.55□□□□□ -1.36
CCDC47-207ENST00000612558 RNASE3P12724 160 aaKnown RBP6.55□□□□□ -1.36
CCDC47-207ENST00000612558 FXYD7P58549 80 aa6.55□□□□□ -1.36
CCDC47-207ENST00000612558 PDZD11Q5EBL8 140 aa6.55□□□□□ -1.36
CCDC47-207ENST00000612558 PRR31Q5SQ13 230 aa6.55□□□□□ -1.36
CCDC47-207ENST00000612558 SMIM15Q7Z3B0 74 aa6.55□□□□□ -1.36
CCDC47-207ENST00000612558 TRPT1Q86TN4 253 aaKnown RBP6.55□□□□□ -1.36
CCDC47-207ENST00000612558 C18orf32Q8TCD1 76 aa6.55□□□□□ -1.36
CCDC47-207ENST00000612558 TP53TG3Q9ULZ0 132 aa6.55□□□□□ -1.36
CCDC47-207ENST00000612558 PHLDA3Q9Y5J5 127 aa6.55□□□□□ -1.36
CCDC47-207ENST00000612558 TIMM8BQ9Y5J9 83 aaPredicted RBP6.55□□□□□ -1.36
CCDC47-207ENST00000612558 IGHV3-16A0A0C4DH30 117 aa6.54□□□□□ -1.36
CCDC47-207ENST00000612558 AMBPP02760 352 aa6.54□□□□□ -1.36
CCDC47-207ENST00000612558 ESDP10768 282 aa6.54□□□□□ -1.36
CCDC47-207ENST00000612558 NUTF2P61970 127 aaKnown RBP6.54□□□□□ -1.36
CCDC47-207ENST00000612558 AMN1Q8IY45 258 aa6.54□□□□□ -1.36
CCDC47-207ENST00000612558 C20orf144Q9BQM9 153 aa6.54□□□□□ -1.36
CCDC47-207ENST00000612558 MCRIP2Q9BUT9 160 aaKnown RBP6.54□□□□□ -1.36
CCDC47-207ENST00000612558 ZNF747Q9BV97 191 aa6.54□□□□□ -1.36
CCDC47-207ENST00000612558 MAST4O15021 2626 aa6.54□□□□□ -1.36
CCDC47-207ENST00000612558 TRGV11A0A075B6L2 103 aa6.53□□□□□ -1.36
CCDC47-207ENST00000612558 NUPR1O60356 82 aa6.53□□□□□ -1.36
CCDC47-207ENST00000612558 SERF1AO75920 110 aa6.53□□□□□ -1.36
CCDC47-207ENST00000612558 FABP4P15090 132 aa6.53□□□□□ -1.36
CCDC47-207ENST00000612558 RAB4AP20338 218 aa6.53□□□□□ -1.36
CCDC47-207ENST00000612558 MRPL51Q4U2R6 128 aaKnown RBP6.53□□□□□ -1.36
CCDC47-207ENST00000612558 Q8N1Y9 231 aa6.53□□□□□ -1.36
CCDC47-207ENST00000612558 WFDC9Q8NEX5 89 aa6.53□□□□□ -1.36
CCDC47-207ENST00000612558 TMEM18Q96B42 140 aa6.53□□□□□ -1.36
CCDC47-207ENST00000612558 HIST1H2BLQ99880 126 aa6.53□□□□□ -1.36
CCDC47-207ENST00000612558 U3KQK5 164 aa6.53□□□□□ -1.36
CCDC47-207ENST00000612558 MUC4Q99102 2169 aa6.53□□□□□ -1.36
CCDC47-207ENST00000612558 CBY3A6NI87 242 aa6.52□□□□□ -1.36
CCDC47-207ENST00000612558 M0R381 172 aa6.52□□□□□ -1.36
CCDC47-207ENST00000612558 INSP01308 110 aa6.52□□□□□ -1.36
CCDC47-207ENST00000612558 PPBPP02775 128 aa6.52□□□□□ -1.36
CCDC47-207ENST00000612558 RBMY1A1P0DJD3 496 aaKnown RBP6.52□□□□□ -1.36
CCDC47-207ENST00000612558 RBMY1CP0DJD4 496 aa6.52□□□□□ -1.36
CCDC47-207ENST00000612558 EVI2AP22794 236 aa6.52□□□□□ -1.36
CCDC47-207ENST00000612558 RBMY1FQ15415 496 aaKnown RBP6.52□□□□□ -1.36
CCDC47-207ENST00000612558 IQCJQ1A5X6 159 aa6.52□□□□□ -1.36
CCDC47-207ENST00000612558 PRIMA1Q86XR5 153 aa6.52□□□□□ -1.36
CCDC47-207ENST00000612558 ORMDL3Q8N138 153 aa6.52□□□□□ -1.36
CCDC47-207ENST00000612558 RNF185Q96GF1 192 aa6.52□□□□□ -1.36
CCDC47-207ENST00000612558 C9orf85Q96MD7 179 aa6.52□□□□□ -1.36
CCDC47-207ENST00000612558 LINC00467Q9BRT7 94 aa6.52□□□□□ -1.36
CCDC47-207ENST00000612558 MDFICQ9P1T7 246 aa6.52□□□□□ -1.36
CCDC47-207ENST00000612558 D6R8Y8 96 aa6.52□□□□□ -1.37
CCDC47-207ENST00000612558 NXPH4O95158 308 aa6.52□□□□□ -1.37
CCDC47-207ENST00000612558 CKS2P33552 79 aa6.52□□□□□ -1.37
CCDC47-207ENST00000612558 C3orf56Q8N813 242 aa6.52□□□□□ -1.37
CCDC47-207ENST00000612558 OR10D4PQ8NGN7 298 aa6.52□□□□□ -1.37
CCDC47-207ENST00000612558 SPATA3Q8NHX4 192 aa6.52□□□□□ -1.37
CCDC47-207ENST00000612558 PRELID3AQ96N28 172 aa6.52□□□□□ -1.37
CCDC47-207ENST00000612558 RCHY1Q96PM5 261 aa6.52□□□□□ -1.37
CCDC47-207ENST00000612558 LINC01587Q99440 93 aa6.52□□□□□ -1.37
CCDC47-207ENST00000612558 XCL2Q9UBD3 114 aa6.52□□□□□ -1.37
CCDC47-207ENST00000612558 TRRAPQ9Y4A5 3859 aa6.52□□□□□ -1.37
CCDC47-207ENST00000612558 VWFP04275 2813 aa6.51□□□□□ -1.37
CCDC47-207ENST00000612558 SPRY2O43597 315 aa6.51□□□□□ -1.37
CCDC47-207ENST00000612558 GTSCR1Q86UQ5 136 aa6.51□□□□□ -1.37
CCDC47-207ENST00000612558 NIT1Q86X76 327 aa6.51□□□□□ -1.37
CCDC47-207ENST00000612558 SYT8Q8NBV8 401 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 112.4 ms