RNA–Protein interactions for RNA: ENST00000611625.4

CDH1-212, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 4,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-212ENST00000611625 Q8NA96 180 aa9.64□□□□□ -0.87
CDH1-212ENST00000611625 SPINK8P0C7L1 97 aa9.64□□□□□ -0.87
CDH1-212ENST00000611625 TTTY13Q9BZ97 58 aa9.64□□□□□ -0.87
CDH1-212ENST00000611625 J3QQQ9 107 aa9.63□□□□□ -0.87
CDH1-212ENST00000611625 LINC00158P58513 81 aa9.63□□□□□ -0.87
CDH1-212ENST00000611625 TCTEX1D4Q5JR98 221 aa9.63□□□□□ -0.87
CDH1-212ENST00000611625 MAPK1IP1LQ8NDC0 245 aa9.63□□□□□ -0.87
CDH1-212ENST00000611625 BOD1L2Q8IYS8 172 aa9.63□□□□□ -0.87
CDH1-212ENST00000611625 RPL39LQ96EH5 51 aaKnown RBP9.63□□□□□ -0.87
CDH1-212ENST00000611625 COL5A1P20908 1838 aaPredicted RBP9.63□□□□□ -0.87
CDH1-212ENST00000611625 SAP30O75446 220 aa9.63□□□□□ -0.87
CDH1-212ENST00000611625 PRIMA1Q86XR5 153 aa9.62□□□□□ -0.87
CDH1-212ENST00000611625 TLN1Q9Y490 2541 aaKnown RBP9.62□□□□□ -0.87
CDH1-212ENST00000611625 CMC4P56277 68 aaPredicted RBP9.62□□□□□ -0.87
CDH1-212ENST00000611625 C16orf54Q6UWD8 224 aa9.62□□□□□ -0.87
CDH1-212ENST00000611625 RNF223E7ERA6 249 aa9.62□□□□□ -0.87
CDH1-212ENST00000611625 LOXL1Q08397 574 aaPredicted RBP9.62□□□□□ -0.87
CDH1-212ENST00000611625 SPATA12Q7Z6I5 190 aa9.62□□□□□ -0.87
CDH1-212ENST00000611625 PPDPFLQ8WWR9 84 aa9.62□□□□□ -0.87
CDH1-212ENST00000611625 PRO1854Q9UHT4 67 aa9.62□□□□□ -0.87
CDH1-212ENST00000611625 UTRNP46939 3433 aa9.62□□□□□ -0.87
CDH1-212ENST00000611625 ADORA2A-AS1P86434 159 aa9.62□□□□□ -0.87
CDH1-212ENST00000611625 ZFP36P26651 326 aaKnown RBP9.61□□□□□ -0.87
CDH1-212ENST00000611625 FXYD2P54710 66 aa9.61□□□□□ -0.87
CDH1-212ENST00000611625 XCL2Q9UBD3 114 aa9.61□□□□□ -0.87
CDH1-212ENST00000611625 CRPP02741 224 aa9.61□□□□□ -0.87
CDH1-212ENST00000611625 TANC2Q9HCD6 1990 aa9.61□□□□□ -0.87
CDH1-212ENST00000611625 IGHV3-16A0A0C4DH30 117 aa9.61□□□□□ -0.87
CDH1-212ENST00000611625 HTN3P15516 51 aa9.6□□□□□ -0.87
CDH1-212ENST00000611625 MYCNOSP40205 109 aa9.6□□□□□ -0.87
CDH1-212ENST00000611625 FBXL19-AS1Q494R0 122 aa9.6□□□□□ -0.87
CDH1-212ENST00000611625 C5orf56Q8N8D9 126 aa9.6□□□□□ -0.87
CDH1-212ENST00000611625 ZNF625Q96I27 306 aaPredicted RBP9.6□□□□□ -0.87
CDH1-212ENST00000611625 TRAV8-3A0A0A6YYJ7 113 aa9.6□□□□□ -0.87
CDH1-212ENST00000611625 C9orf47Q6ZRZ4 202 aa9.6□□□□□ -0.87
CDH1-212ENST00000611625 IGHV4-61A0A0C4DH41 118 aa9.6□□□□□ -0.87
CDH1-212ENST00000611625 SRSF2Q01130 221 aaKnown RBP9.6□□□□□ -0.87
CDH1-212ENST00000611625 ATP6V0BQ99437 205 aa9.6□□□□□ -0.87
CDH1-212ENST00000611625 HIGD1BQ9P298 99 aa9.6□□□□□ -0.87
CDH1-212ENST00000611625 NDUFA12Q9UI09 145 aa9.6□□□□□ -0.87
CDH1-212ENST00000611625 CRYGBP07316 175 aa9.6□□□□□ -0.87
CDH1-212ENST00000611625 FGF6P10767 208 aa9.6□□□□□ -0.87
CDH1-212ENST00000611625 ODF1Q14990 250 aa9.6□□□□□ -0.87
CDH1-212ENST00000611625 GAGE12HA6NDE8 117 aa9.59□□□□□ -0.87
CDH1-212ENST00000611625 IGLL5B9A064 214 aa9.59□□□□□ -0.87
CDH1-212ENST00000611625 ZNF80P51504 273 aaPredicted RBP9.59□□□□□ -0.87
CDH1-212ENST00000611625 TMEM86BQ8N661 226 aa9.59□□□□□ -0.87
CDH1-212ENST00000611625 LINC01619G3V211 115 aa9.59□□□□□ -0.87
CDH1-212ENST00000611625 RPL35AP18077 110 aaKnown RBP9.59□□□□□ -0.87
CDH1-212ENST00000611625 RNF114Q9Y508 228 aa9.59□□□□□ -0.87
CDH1-212ENST00000611625 MALP21145 153 aa9.59□□□□□ -0.87
CDH1-212ENST00000611625 NSUN5P1Q3KNT7 163 aa9.59□□□□□ -0.87
CDH1-212ENST00000611625 BLCAPP62952 87 aa9.59□□□□□ -0.87
CDH1-212ENST00000611625 RHOHQ15669 191 aa9.59□□□□□ -0.87
CDH1-212ENST00000611625 AJUBAQ96IF1 538 aa9.59□□□□□ -0.87
CDH1-212ENST00000611625 ELANEP08246 267 aa9.58□□□□□ -0.88
CDH1-212ENST00000611625 WNK1Q9H4A3 2382 aa9.58□□□□□ -0.88
CDH1-212ENST00000611625 TEX48A0A1B0GUV7 120 aa9.58□□□□□ -0.88
CDH1-212ENST00000611625 PAX4O43316 350 aa9.58□□□□□ -0.88
CDH1-212ENST00000611625 SIRPDQ9H106 197 aa9.58□□□□□ -0.88
CDH1-212ENST00000611625 TP73-AS1Q9UF72 201 aa9.58□□□□□ -0.88
CDH1-212ENST00000611625 EXPH5Q8NEV8 1989 aa9.58□□□□□ -0.88
CDH1-212ENST00000611625 IGHV3-38A0A0C4DH36 116 aa9.58□□□□□ -0.88
CDH1-212ENST00000611625 IGHV4-38-2P0DP08 117 aa9.58□□□□□ -0.88
CDH1-212ENST00000611625 C1QTNF4Q9BXJ3 329 aa9.57□□□□□ -0.88
CDH1-212ENST00000611625 LEPROTO15243 131 aa9.57□□□□□ -0.88
CDH1-212ENST00000611625 IGHV4-59P01825 116 aa9.57□□□□□ -0.88
CDH1-212ENST00000611625 ODF3BA8MYP8 253 aa9.57□□□□□ -0.88
CDH1-212ENST00000611625 SUMO4Q6EEV6 95 aa9.57□□□□□ -0.88
CDH1-212ENST00000611625 ATRXP46100 2492 aa9.57□□□□□ -0.88
CDH1-212ENST00000611625 J3QLI3 93 aa9.56□□□□□ -0.88
CDH1-212ENST00000611625 DEFB112Q30KQ8 113 aa9.56□□□□□ -0.88
CDH1-212ENST00000611625 FOXI2Q6ZQN5 318 aa9.56□□□□□ -0.88
CDH1-212ENST00000611625 IGF2RP11717 2491 aa9.56□□□□□ -0.88
CDH1-212ENST00000611625 GAGE12JA6NER3 117 aa9.56□□□□□ -0.88
CDH1-212ENST00000611625 LINC00310P59036 64 aa9.56□□□□□ -0.88
CDH1-212ENST00000611625 GAGE4Q13068 117 aa9.56□□□□□ -0.88
CDH1-212ENST00000611625 GAGE5Q13069 117 aa9.56□□□□□ -0.88
CDH1-212ENST00000611625 GATD1Q8NB37 220 aa9.56□□□□□ -0.88
CDH1-212ENST00000611625 C11orf68Q9H3H3 251 aaKnown RBP9.56□□□□□ -0.88
CDH1-212ENST00000611625 PCNTO95613 3336 aa9.56□□□□□ -0.88
CDH1-212ENST00000611625 TRAV12-1A0A0B4J245 112 aa9.56□□□□□ -0.88
CDH1-212ENST00000611625 IGLC6P0CF74 106 aa9.56□□□□□ -0.88
CDH1-212ENST00000611625 ZNRF2Q8NHG8 242 aa9.56□□□□□ -0.88
CDH1-212ENST00000611625 H3BMM0 161 aa9.56□□□□□ -0.88
CDH1-212ENST00000611625 DEFB1P60022 68 aa9.56□□□□□ -0.88
CDH1-212ENST00000611625 ZFP2Q6ZN57 461 aa9.56□□□□□ -0.88
CDH1-212ENST00000611625 UBE2WQ96B02 151 aa9.56□□□□□ -0.88
CDH1-212ENST00000611625 AZU1P20160 251 aa9.55□□□□□ -0.88
CDH1-212ENST00000611625 RNASE13Q5GAN3 156 aaKnown RBP9.55□□□□□ -0.88
CDH1-212ENST00000611625 SH2D6Q7Z4S9 175 aa9.55□□□□□ -0.88
CDH1-212ENST00000611625 SLC25A20O43772 301 aa9.55□□□□□ -0.88
CDH1-212ENST00000611625 HOXD3P31249 432 aaPredicted RBP9.55□□□□□ -0.88
CDH1-212ENST00000611625 C6orf226Q5I0X4 101 aa9.54□□□□□ -0.88
CDH1-212ENST00000611625 CRIP1P50238 77 aa9.54□□□□□ -0.88
CDH1-212ENST00000611625 CCDC140Q96MF4 163 aa9.54□□□□□ -0.88
CDH1-212ENST00000611625 SP5Q6BEB4 398 aaPredicted RBP9.54□□□□□ -0.88
CDH1-212ENST00000611625 IGHV4-30-2A0A087WSY4 118 aa9.53□□□□□ -0.88
CDH1-212ENST00000611625 LGALS1P09382 135 aaKnown RBP9.53□□□□□ -0.88
CDH1-212ENST00000611625 UNQ9165/PRO28630Q6UXU0 137 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms