RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 KCPQ6ZWJ8 1503 aa2.9□□□□□ -1.95
LINC00397-202ENST00000606785 C5P01031 1676 aa2.9□□□□□ -1.95
LINC00397-202ENST00000606785 MYOM1P52179 1685 aa2.9□□□□□ -1.95
LINC00397-202ENST00000606785 IGKV1OR2-108A0A075B7D4 117 aa2.9□□□□□ -1.95
LINC00397-202ENST00000606785 IGKV1D-43A0A0B4J1Z2 117 aa2.9□□□□□ -1.95
LINC00397-202ENST00000606785 TRAV17A0A0B4J275 112 aa2.9□□□□□ -1.95
LINC00397-202ENST00000606785 hADV29S1A0JD25 119 aa2.9□□□□□ -1.95
LINC00397-202ENST00000606785 A8MWP4 228 aa2.9□□□□□ -1.95
LINC00397-202ENST00000606785 NUPR1O60356 82 aa2.9□□□□□ -1.95
LINC00397-202ENST00000606785 HBDP02042 147 aa2.9□□□□□ -1.95
LINC00397-202ENST00000606785 PIPP12273 146 aaPredicted RBP2.9□□□□□ -1.95
LINC00397-202ENST00000606785 UBE2BP63146 152 aa2.9□□□□□ -1.95
LINC00397-202ENST00000606785 PSMG4Q5JS54 123 aa2.9□□□□□ -1.95
LINC00397-202ENST00000606785 MIC13Q5XKP0 118 aa2.9□□□□□ -1.95
LINC00397-202ENST00000606785 FP248Q71RG6 208 aaPredicted RBP2.9□□□□□ -1.95
LINC00397-202ENST00000606785 BAGE3Q86Y29 109 aa2.9□□□□□ -1.95
LINC00397-202ENST00000606785 BAGE2Q86Y30 109 aa2.9□□□□□ -1.95
LINC00397-202ENST00000606785 TSKUQ8WUA8 353 aa2.9□□□□□ -1.95
LINC00397-202ENST00000606785 FGF13Q92913 245 aa2.9□□□□□ -1.95
LINC00397-202ENST00000606785 OR8B2Q96RD0 313 aa2.9□□□□□ -1.95
LINC00397-202ENST00000606785 B9D2Q9BPU9 175 aa2.9□□□□□ -1.95
LINC00397-202ENST00000606785 ZNF286AQ9HBT8 521 aa2.9□□□□□ -1.95
LINC00397-202ENST00000606785 ZNF492Q9P255 531 aa2.9□□□□□ -1.95
LINC00397-202ENST00000606785 TP73-AS1Q9UF72 201 aa2.9□□□□□ -1.95
LINC00397-202ENST00000606785 LINC00588Q9Y4M8 146 aa2.9□□□□□ -1.95
LINC00397-202ENST00000606785 ICOSQ9Y6W8 199 aa2.9□□□□□ -1.95
LINC00397-202ENST00000606785 PIK3C2AO00443 1686 aa2.89□□□□□ -1.95
LINC00397-202ENST00000606785 ALS2Q96Q42 1657 aa2.89□□□□□ -1.95
LINC00397-202ENST00000606785 IGKV1D-33P01593 117 aa2.89□□□□□ -1.95
LINC00397-202ENST00000606785 IGKV1-33P01594 117 aa2.89□□□□□ -1.95
LINC00397-202ENST00000606785 IGLV3-27P01718 113 aa2.89□□□□□ -1.95
LINC00397-202ENST00000606785 INAFM2P0DMQ5 153 aa2.89□□□□□ -1.95
LINC00397-202ENST00000606785 DAPP51397 102 aa2.89□□□□□ -1.95
LINC00397-202ENST00000606785 DYNLT3P51808 116 aa2.89□□□□□ -1.95
LINC00397-202ENST00000606785 SNRPFP62306 86 aaKnown RBP2.89□□□□□ -1.95
LINC00397-202ENST00000606785 CEP170Q5SW79 1584 aa2.89□□□□□ -1.95
LINC00397-202ENST00000606785 LCE3AQ5TA76 89 aa2.89□□□□□ -1.95
LINC00397-202ENST00000606785 EBLN2Q6P2I7 272 aa2.89□□□□□ -1.95
LINC00397-202ENST00000606785 C2orf91Q6ZV80 131 aa2.89□□□□□ -1.95
LINC00397-202ENST00000606785 UBR1Q8IWV7 1749 aa2.89□□□□□ -1.95
LINC00397-202ENST00000606785 Q8N2B8 174 aa2.89□□□□□ -1.95
LINC00397-202ENST00000606785 SERP2Q8N6R1 65 aa2.89□□□□□ -1.95
LINC00397-202ENST00000606785 SMIM4Q8WVI0 70 aa2.89□□□□□ -1.95
LINC00397-202ENST00000606785 RMI2Q96E14 147 aa2.89□□□□□ -1.95
LINC00397-202ENST00000606785 LINC01600Q96MT4 127 aa2.89□□□□□ -1.95
LINC00397-202ENST00000606785 UPK3BQ9BT76 320 aa2.89□□□□□ -1.95
LINC00397-202ENST00000606785 EPDR1Q9UM22 224 aa2.89□□□□□ -1.95
LINC00397-202ENST00000606785 ANAPC1Q9H1A4 1944 aa2.89□□□□□ -1.95
LINC00397-202ENST00000606785 MRC1P22897 1456 aa2.89□□□□□ -1.95
LINC00397-202ENST00000606785 MCM3APO60318 1980 aa2.89□□□□□ -1.95
LINC00397-202ENST00000606785 CASP8AP2Q9UKL3 1982 aa2.89□□□□□ -1.95
LINC00397-202ENST00000606785 CPS1P31327 1500 aa2.88□□□□□ -1.95
LINC00397-202ENST00000606785 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.88□□□□□ -1.95
LINC00397-202ENST00000606785 IGHV3OR15-7A0A075B7D8 119 aa2.88□□□□□ -1.95
LINC00397-202ENST00000606785 K7ERJ3 54 aa2.88□□□□□ -1.95
LINC00397-202ENST00000606785 TIMM17BO60830 172 aa2.88□□□□□ -1.95
LINC00397-202ENST00000606785 IGKV1-5P01602 117 aa2.88□□□□□ -1.95
LINC00397-202ENST00000606785 ACYP1P07311 99 aa2.88□□□□□ -1.95
LINC00397-202ENST00000606785 ASAH2BP0C7U1 165 aa2.88□□□□□ -1.95
LINC00397-202ENST00000606785 S100A4P26447 101 aaKnown RBP2.88□□□□□ -1.95
LINC00397-202ENST00000606785 LY6EQ16553 131 aa2.88□□□□□ -1.95
LINC00397-202ENST00000606785 C12orf73Q69YU5 71 aa2.88□□□□□ -1.95
LINC00397-202ENST00000606785 RPL7L1Q6DKI1 246 aaKnown RBP2.88□□□□□ -1.95
LINC00397-202ENST00000606785 C5orf38Q86SI9 138 aa2.88□□□□□ -1.95
LINC00397-202ENST00000606785 RPRMLQ8N4K4 120 aa2.88□□□□□ -1.95
LINC00397-202ENST00000606785 ODF3Q96PU9 254 aa2.88□□□□□ -1.95
LINC00397-202ENST00000606785 TRGV9Q99603 122 aa2.88□□□□□ -1.95
LINC00397-202ENST00000606785 NXT2Q9NPJ8 142 aaKnown RBP2.88□□□□□ -1.95
LINC00397-202ENST00000606785 EXPH5Q8NEV8 1989 aa2.88□□□□□ -1.95
LINC00397-202ENST00000606785 COL1A1P02452 1464 aaPredicted RBP2.88□□□□□ -1.95
LINC00397-202ENST00000606785 ARFGEF1Q9Y6D6 1849 aa2.88□□□□□ -1.95
LINC00397-202ENST00000606785 TJP1Q07157 1748 aa2.88□□□□□ -1.95
LINC00397-202ENST00000606785 COL14A1Q05707 1796 aaKnown RBP2.87□□□□□ -1.95
LINC00397-202ENST00000606785 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.87□□□□□ -1.95
LINC00397-202ENST00000606785 ZNF736B4DX44 427 aaPredicted RBP2.87□□□□□ -1.95
LINC00397-202ENST00000606785 H3BQ85 93 aa2.87□□□□□ -1.95
LINC00397-202ENST00000606785 CCL16O15467 120 aa2.87□□□□□ -1.95
LINC00397-202ENST00000606785 PRB2P02812 416 aaPredicted RBP2.87□□□□□ -1.95
LINC00397-202ENST00000606785 HIST1H4AP62805 103 aaKnown RBP2.87□□□□□ -1.95
LINC00397-202ENST00000606785 ZNF791Q3KP31 576 aaPredicted RBP2.87□□□□□ -1.95
LINC00397-202ENST00000606785 C7orf65Q6ZTY9 151 aa2.87□□□□□ -1.95
LINC00397-202ENST00000606785 ADM2Q7Z4H4 148 aa2.87□□□□□ -1.95
LINC00397-202ENST00000606785 PPP1R1CQ8WVI7 109 aa2.87□□□□□ -1.95
LINC00397-202ENST00000606785 HIGD1BQ9P298 99 aa2.87□□□□□ -1.95
LINC00397-202ENST00000606785 ARL2-SNX15V9GYD0 113 aa2.87□□□□□ -1.95
LINC00397-202ENST00000606785 QSER1Q2KHR3 1735 aa2.87□□□□□ -1.95
LINC00397-202ENST00000606785 PHRF1Q9P1Y6 1649 aaKnown RBP2.86□□□□□ -1.95
LINC00397-202ENST00000606785 PTPRDP23468 1912 aa2.86□□□□□ -1.95
LINC00397-202ENST00000606785 PKD1L3Q7Z443 1732 aa2.86□□□□□ -1.95
LINC00397-202ENST00000606785 F2Z2F3 143 aa2.86□□□□□ -1.95
LINC00397-202ENST00000606785 H3BMM0 161 aa2.86□□□□□ -1.95
LINC00397-202ENST00000606785 BUB1B-PAK6H3BSN5 160 aa2.86□□□□□ -1.95
LINC00397-202ENST00000606785 C1QAP02745 245 aa2.86□□□□□ -1.95
LINC00397-202ENST00000606785 PCBD1P61457 104 aa2.86□□□□□ -1.95
LINC00397-202ENST00000606785 CCL20P78556 96 aa2.86□□□□□ -1.95
LINC00397-202ENST00000606785 SS18Q15532 418 aa2.86□□□□□ -1.95
LINC00397-202ENST00000606785 KRTAP13-2Q52LG2 175 aa2.86□□□□□ -1.95
LINC00397-202ENST00000606785 LINC01554Q52M75 96 aa2.86□□□□□ -1.95
LINC00397-202ENST00000606785 TMEM170BQ5T4T1 132 aa2.86□□□□□ -1.95
LINC00397-202ENST00000606785 CYP2G1PQ6ZSU1 146 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms