RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 PHLDA3Q9Y5J5 127 aa8.35□□□□□ -1.07
SMAD4-205ENST00000588745 TIMM8BQ9Y5J9 83 aaPredicted RBP8.35□□□□□ -1.07
SMAD4-205ENST00000588745 UBE2CO00762 179 aa8.35□□□□□ -1.07
SMAD4-205ENST00000588745 NXPH4O95158 308 aa8.35□□□□□ -1.07
SMAD4-205ENST00000588745 COA6Q5JTJ3 125 aaKnown RBP8.35□□□□□ -1.07
SMAD4-205ENST00000588745 FAM104BQ5XKR9 115 aa8.35□□□□□ -1.07
SMAD4-205ENST00000588745 MORN3Q6PF18 240 aaPredicted RBP8.35□□□□□ -1.07
SMAD4-205ENST00000588745 DEFB125Q8N687 156 aa8.35□□□□□ -1.07
SMAD4-205ENST00000588745 C9orf85Q96MD7 179 aa8.35□□□□□ -1.07
SMAD4-205ENST00000588745 LINC00467Q9BRT7 94 aa8.35□□□□□ -1.07
SMAD4-205ENST00000588745 XCL2Q9UBD3 114 aa8.35□□□□□ -1.07
SMAD4-205ENST00000588745 TRRAPQ9Y4A5 3859 aa8.34□□□□□ -1.07
SMAD4-205ENST00000588745 CBY3A6NI87 242 aa8.34□□□□□ -1.07
SMAD4-205ENST00000588745 M0R381 172 aa8.34□□□□□ -1.07
SMAD4-205ENST00000588745 OR10J3Q5JRS4 329 aa8.34□□□□□ -1.07
SMAD4-205ENST00000588745 DMRTA1Q5VZB9 504 aa8.34□□□□□ -1.07
SMAD4-205ENST00000588745 AMN1Q8IY45 258 aa8.34□□□□□ -1.07
SMAD4-205ENST00000588745 ALKBH7Q9BT30 221 aaPredicted RBP8.34□□□□□ -1.07
SMAD4-205ENST00000588745 RPL35AP18077 110 aaKnown RBP8.33□□□□□ -1.08
SMAD4-205ENST00000588745 HOXA5P20719 270 aa8.33□□□□□ -1.08
SMAD4-205ENST00000588745 Q0VG73 95 aa8.33□□□□□ -1.08
SMAD4-205ENST00000588745 SMIM15Q7Z3B0 74 aa8.33□□□□□ -1.08
SMAD4-205ENST00000588745 TMEM256Q8N2U0 113 aa8.33□□□□□ -1.08
SMAD4-205ENST00000588745 LINC01587Q99440 93 aa8.33□□□□□ -1.08
SMAD4-205ENST00000588745 C1QTNF4Q9BXJ3 329 aa8.33□□□□□ -1.08
SMAD4-205ENST00000588745 MDFICQ9P1T7 246 aa8.33□□□□□ -1.08
SMAD4-205ENST00000588745 ANK2Q01484 3957 aa8.32□□□□□ -1.08
SMAD4-205ENST00000588745 SPRY2O43597 315 aa8.32□□□□□ -1.08
SMAD4-205ENST00000588745 GIG44P09565 113 aaPredicted RBP8.32□□□□□ -1.08
SMAD4-205ENST00000588745 C1orf158Q8N1D5 194 aa8.32□□□□□ -1.08
SMAD4-205ENST00000588745 HIST3H2BBQ8N257 126 aa8.32□□□□□ -1.08
SMAD4-205ENST00000588745 C18orf32Q8TCD1 76 aa8.32□□□□□ -1.08
SMAD4-205ENST00000588745 RNF185Q96GF1 192 aa8.32□□□□□ -1.08
SMAD4-205ENST00000588745 AP1S3Q96PC3 154 aa8.32□□□□□ -1.08
SMAD4-205ENST00000588745 TMEM208Q9BTX3 173 aa8.32□□□□□ -1.08
SMAD4-205ENST00000588745 STAB1Q9NY15 2570 aa8.31□□□□□ -1.08
SMAD4-205ENST00000588745 CMYA5Q8N3K9 4069 aa8.31□□□□□ -1.08
SMAD4-205ENST00000588745 D6R8Y8 96 aa8.31□□□□□ -1.08
SMAD4-205ENST00000588745 RAB4AP20338 218 aa8.31□□□□□ -1.08
SMAD4-205ENST00000588745 EVI2AP22794 236 aa8.31□□□□□ -1.08
SMAD4-205ENST00000588745 ZNF415Q09FC8 603 aa8.31□□□□□ -1.08
SMAD4-205ENST00000588745 MRPL51Q4U2R6 128 aaKnown RBP8.31□□□□□ -1.08
SMAD4-205ENST00000588745 BAGE3Q86Y29 109 aa8.31□□□□□ -1.08
SMAD4-205ENST00000588745 SYT8Q8NBV8 401 aa8.31□□□□□ -1.08
SMAD4-205ENST00000588745 U3KQK5 164 aa8.31□□□□□ -1.08
SMAD4-205ENST00000588745 NOTCH3Q9UM47 2321 aa8.3□□□□□ -1.08
SMAD4-205ENST00000588745 HTN1P15515 57 aa8.3□□□□□ -1.08
SMAD4-205ENST00000588745 LINC00310P59036 64 aa8.3□□□□□ -1.08
SMAD4-205ENST00000588745 IQCJQ1A5X6 159 aa8.3□□□□□ -1.08
SMAD4-205ENST00000588745 ORMDL3Q8N138 153 aa8.3□□□□□ -1.08
SMAD4-205ENST00000588745 DPH3P1Q9H4G8 78 aa8.3□□□□□ -1.08
SMAD4-205ENST00000588745 GOLT1BQ9Y3E0 138 aa8.3□□□□□ -1.08
SMAD4-205ENST00000588745 MUC4Q99102 2169 aa8.29□□□□□ -1.08
SMAD4-205ENST00000588745 IGHV3OR16-12A0A075B7B8 117 aa8.29□□□□□ -1.08
SMAD4-205ENST00000588745 SERF1AO75920 110 aa8.29□□□□□ -1.08
SMAD4-205ENST00000588745 ESDP10768 282 aa8.29□□□□□ -1.08
SMAD4-205ENST00000588745 CKS2P33552 79 aa8.29□□□□□ -1.08
SMAD4-205ENST00000588745 PDZD11Q5EBL8 140 aa8.29□□□□□ -1.08
SMAD4-205ENST00000588745 C11orf72Q8NBR9 251 aa8.29□□□□□ -1.08
SMAD4-205ENST00000588745 CSNK1G2-AS1Q8NCQ2 148 aa8.29□□□□□ -1.08
SMAD4-205ENST00000588745 PRELID3AQ96N28 172 aa8.29□□□□□ -1.08
SMAD4-205ENST00000588745 IFITM10A6NMD0 228 aa8.28□□□□□ -1.08
SMAD4-205ENST00000588745 SMKR1H3BMG3 65 aa8.28□□□□□ -1.08
SMAD4-205ENST00000588745 NCR2O95944 276 aa8.28□□□□□ -1.08
SMAD4-205ENST00000588745 PPBPP02775 128 aa8.28□□□□□ -1.08
SMAD4-205ENST00000588745 PRM2P04554 102 aa8.28□□□□□ -1.08
SMAD4-205ENST00000588745 S100A2P29034 98 aa8.28□□□□□ -1.08
SMAD4-205ENST00000588745 OXLD1Q5BKU9 147 aa8.28□□□□□ -1.08
SMAD4-205ENST00000588745 C14orf178Q8N769 122 aaPredicted RBP8.28□□□□□ -1.08
SMAD4-205ENST00000588745 RCHY1Q96PM5 261 aa8.28□□□□□ -1.08
SMAD4-205ENST00000588745 CSTL1Q9H114 145 aa8.28□□□□□ -1.08
SMAD4-205ENST00000588745 COL6A5A8TX70 2615 aa8.28□□□□□ -1.08
SMAD4-205ENST00000588745 NUPR1O60356 82 aa8.27□□□□□ -1.09
SMAD4-205ENST00000588745 EGFEM1PQ0D2K5 195 aa8.27□□□□□ -1.09
SMAD4-205ENST00000588745 ZNF876PQ49A33 203 aa8.27□□□□□ -1.09
SMAD4-205ENST00000588745 ZNF705AQ6ZN79 300 aaPredicted RBP8.27□□□□□ -1.09
SMAD4-205ENST00000588745 IL17DQ8TAD2 202 aa8.27□□□□□ -1.09
SMAD4-205ENST00000588745 TMEM263Q8WUH6 116 aaKnown RBP8.27□□□□□ -1.09
SMAD4-205ENST00000588745 PTH2Q96A98 100 aa8.27□□□□□ -1.09
SMAD4-205ENST00000588745 SPXQ9BT56 116 aa8.27□□□□□ -1.09
SMAD4-205ENST00000588745 GSN-AS1Q9NRJ2 163 aa8.27□□□□□ -1.09
SMAD4-205ENST00000588745 LAMTOR2Q9Y2Q5 125 aa8.27□□□□□ -1.09
SMAD4-205ENST00000588745 KIF25-AS1Q9Y6Z4 181 aa8.27□□□□□ -1.09
SMAD4-205ENST00000588745 M0R2P5 195 aa8.26□□□□□ -1.09
SMAD4-205ENST00000588745 NPYP01303 97 aa8.26□□□□□ -1.09
SMAD4-205ENST00000588745 MGPP08493 103 aa8.26□□□□□ -1.09
SMAD4-205ENST00000588745 SMIM17P0DL12 118 aa8.26□□□□□ -1.09
SMAD4-205ENST00000588745 AZU1P20160 251 aa8.26□□□□□ -1.09
SMAD4-205ENST00000588745 AKR1D1P51857 326 aa8.26□□□□□ -1.09
SMAD4-205ENST00000588745 POM121L12Q8N7R1 296 aa8.26□□□□□ -1.09
SMAD4-205ENST00000588745 RNASE8Q8TDE3 154 aaKnown RBP8.26□□□□□ -1.09
SMAD4-205ENST00000588745 MRAP2Q96G30 205 aa8.26□□□□□ -1.09
SMAD4-205ENST00000588745 HIST1H2BLQ99880 126 aa8.26□□□□□ -1.09
SMAD4-205ENST00000588745 JPT2Q9H910 190 aa8.26□□□□□ -1.09
SMAD4-205ENST00000588745 KIR2DL5BA0A0G2JN68 375 aa8.25□□□□□ -1.09
SMAD4-205ENST00000588745 KIR2DL5BA0A0G2JPC4 375 aa8.25□□□□□ -1.09
SMAD4-205ENST00000588745 FABP4P15090 132 aa8.25□□□□□ -1.09
SMAD4-205ENST00000588745 APOC4P55056 127 aa8.25□□□□□ -1.09
SMAD4-205ENST00000588745 LINC00315P59091 139 aa8.25□□□□□ -1.09
SMAD4-205ENST00000588745 KRTAP10-11P60412 298 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms