RNA–Protein interactions for RNA: ENST00000588074.1

LINC01538-201, Transcript of long intergenic non-protein coding RNA 1538, humanhuman

TSL 1 (best) BASIC

Gene LINC01538, Length 2,408 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01538-201ENST00000588074 SPTBP11277 2137 aa4.2□□□□□ -1.74
LINC01538-201ENST00000588074 RHOHQ15669 191 aa4.2□□□□□ -1.74
LINC01538-201ENST00000588074 PIGYQ3MUY2 71 aa4.2□□□□□ -1.74
LINC01538-201ENST00000588074 KRTAP5-3Q6L8H2 238 aa4.2□□□□□ -1.74
LINC01538-201ENST00000588074 FAM223AQ8IWN6 122 aa4.2□□□□□ -1.74
LINC01538-201ENST00000588074 Q9Y3F1 56 aa4.2□□□□□ -1.74
LINC01538-201ENST00000588074 KIAA0100Q14667 2235 aaKnown RBP4.19□□□□□ -1.74
LINC01538-201ENST00000588074 LRP4O75096 1905 aa4.19□□□□□ -1.74
LINC01538-201ENST00000588074 SZT2Q5T011 3432 aa4.19□□□□□ -1.74
LINC01538-201ENST00000588074 LST1O00453 97 aa4.19□□□□□ -1.74
LINC01538-201ENST00000588074 IGKV1D-16P01601 117 aa4.19□□□□□ -1.74
LINC01538-201ENST00000588074 IGLV2-14P01704 120 aa4.19□□□□□ -1.74
LINC01538-201ENST00000588074 ARMS2P0C7Q2 107 aa4.19□□□□□ -1.74
LINC01538-201ENST00000588074 INAFM2P0DMQ5 153 aa4.19□□□□□ -1.74
LINC01538-201ENST00000588074 SLC25A29Q8N8R3 303 aa4.19□□□□□ -1.74
LINC01538-201ENST00000588074 LYZL4Q96KX0 146 aa4.19□□□□□ -1.74
LINC01538-201ENST00000588074 TIMM21Q9BVV7 248 aa4.19□□□□□ -1.74
LINC01538-201ENST00000588074 SHANK1Q9Y566 2161 aa4.19□□□□□ -1.74
LINC01538-201ENST00000588074 IGHV4-61A0A0C4DH41 118 aa4.19□□□□□ -1.74
LINC01538-201ENST00000588074 IBA57-AS1B1ANH7 110 aa4.19□□□□□ -1.74
LINC01538-201ENST00000588074 IGHV4-59P01825 116 aa4.19□□□□□ -1.74
LINC01538-201ENST00000588074 DAD1P61803 113 aa4.19□□□□□ -1.74
LINC01538-201ENST00000588074 KLKP1Q107X0 134 aa4.19□□□□□ -1.74
LINC01538-201ENST00000588074 Q1RN00 199 aa4.19□□□□□ -1.74
LINC01538-201ENST00000588074 WDR86Q86TI4 376 aa4.19□□□□□ -1.74
LINC01538-201ENST00000588074 ZNF491Q8N8L2 437 aa4.19□□□□□ -1.74
LINC01538-201ENST00000588074 TRAV3A0A0B4J244 114 aa4.18□□□□□ -1.74
LINC01538-201ENST00000588074 TMEM223A0PJW6 202 aa4.18□□□□□ -1.74
LINC01538-201ENST00000588074 FAM223BA6NKX1 122 aa4.18□□□□□ -1.74
LINC01538-201ENST00000588074 K7EMT4 169 aa4.18□□□□□ -1.74
LINC01538-201ENST00000588074 NDUFS5O43920 106 aa4.18□□□□□ -1.74
LINC01538-201ENST00000588074 MRPL51Q4U2R6 128 aaKnown RBP4.18□□□□□ -1.74
LINC01538-201ENST00000588074 LYPD5Q6UWN5 251 aa4.18□□□□□ -1.74
LINC01538-201ENST00000588074 LINC00322Q6ZN03 302 aaPredicted RBP4.18□□□□□ -1.74
LINC01538-201ENST00000588074 TMEM75Q8N9X5 138 aa4.18□□□□□ -1.74
LINC01538-201ENST00000588074 EEF1AKMT3Q96AZ1 226 aa4.18□□□□□ -1.74
LINC01538-201ENST00000588074 HEATR1Q9H583 2144 aaKnown RBP4.18□□□□□ -1.74
LINC01538-201ENST00000588074 TRGV8A0A0C4DH27 118 aa4.17□□□□□ -1.74
LINC01538-201ENST00000588074 NDUFA3O95167 84 aa4.17□□□□□ -1.74
LINC01538-201ENST00000588074 IGHV4-38-2P0DP08 117 aa4.17□□□□□ -1.74
LINC01538-201ENST00000588074 CD52P31358 61 aa4.17□□□□□ -1.74
LINC01538-201ENST00000588074 CKS2P33552 79 aa4.17□□□□□ -1.74
LINC01538-201ENST00000588074 SUB1P53999 127 aaKnown RBP eCLIP4.17□□□□□ -1.74
LINC01538-201ENST00000588074 Q8N2B8 174 aa4.17□□□□□ -1.74
LINC01538-201ENST00000588074 Q9H3A6 140 aa4.17□□□□□ -1.74
LINC01538-201ENST00000588074 ZNF71Q9NQZ8 489 aaPredicted RBP4.17□□□□□ -1.74
LINC01538-201ENST00000588074 EYSQ5T1H1 3165 aa4.17□□□□□ -1.74
LINC01538-201ENST00000588074 COL5A1P20908 1838 aaPredicted RBP4.17□□□□□ -1.74
LINC01538-201ENST00000588074 IGKV1-12A0A0C4DH73 117 aa4.17□□□□□ -1.74
LINC01538-201ENST00000588074 TRBV27A0A0K0K1C4 114 aa4.17□□□□□ -1.74
LINC01538-201ENST00000588074 LYRM9A8MSI8 78 aa4.17□□□□□ -1.74
LINC01538-201ENST00000588074 IGKV1D-12P01611 117 aa4.17□□□□□ -1.74
LINC01538-201ENST00000588074 FXYD7P58549 80 aa4.17□□□□□ -1.74
LINC01538-201ENST00000588074 RBM3P98179 157 aaKnown RBP4.17□□□□□ -1.74
LINC01538-201ENST00000588074 C6orf223Q8N319 242 aa4.17□□□□□ -1.74
LINC01538-201ENST00000588074 FAM167A-AS1Q96KT0 104 aa4.17□□□□□ -1.74
LINC01538-201ENST00000588074 DEFB127Q9H1M4 99 aa4.17□□□□□ -1.74
LINC01538-201ENST00000588074 LINC00474Q9P2X8 69 aa4.17□□□□□ -1.74
LINC01538-201ENST00000588074 IGKV1-8A0A0C4DH67 115 aa4.16□□□□□ -1.74
LINC01538-201ENST00000588074 C8orf87E5RJ46 101 aa4.16□□□□□ -1.74
LINC01538-201ENST00000588074 IGHV3-13P01766 116 aa4.16□□□□□ -1.74
LINC01538-201ENST00000588074 DYNAPQ8N1N2 210 aa4.16□□□□□ -1.74
LINC01538-201ENST00000588074 C20orf197Q8N268 126 aa4.16□□□□□ -1.74
LINC01538-201ENST00000588074 WFDC5Q8TCV5 224 aa4.16□□□□□ -1.74
LINC01538-201ENST00000588074 ICOSQ9Y6W8 199 aa4.16□□□□□ -1.74
LINC01538-201ENST00000588074 CACNA1CQ13936 2221 aa4.16□□□□□ -1.74
LINC01538-201ENST00000588074 XIRP2A4UGR9 3374 aa4.16□□□□□ -1.74
LINC01538-201ENST00000588074 IGKV1-27A0A075B6S5 117 aa4.16□□□□□ -1.74
LINC01538-201ENST00000588074 TRAV13-2A0A0B4J235 113 aa4.16□□□□□ -1.74
LINC01538-201ENST00000588074 PLGLAQ15195 96 aa4.16□□□□□ -1.74
LINC01538-201ENST00000588074 FAM222AQ5U5X8 452 aa4.16□□□□□ -1.74
LINC01538-201ENST00000588074 ATP5EP2Q5VTU8 51 aa4.16□□□□□ -1.74
LINC01538-201ENST00000588074 C11orf68Q9H3H3 251 aaKnown RBP4.16□□□□□ -1.74
LINC01538-201ENST00000588074 UBE2D4Q9Y2X8 147 aa4.16□□□□□ -1.74
LINC01538-201ENST00000588074 ADAMTS9Q9P2N4 1935 aa4.15□□□□□ -1.74
LINC01538-201ENST00000588074 IGKV1D-43A0A0B4J1Z2 117 aa4.15□□□□□ -1.74
LINC01538-201ENST00000588074 IGHV1OR15-9A0A0B4J2B8 117 aa4.15□□□□□ -1.74
LINC01538-201ENST00000588074 SMKR1H3BMG3 65 aa4.15□□□□□ -1.74
LINC01538-201ENST00000588074 NXPH4O95158 308 aa4.15□□□□□ -1.74
LINC01538-201ENST00000588074 ECSCRQ19T08 205 aa4.15□□□□□ -1.74
LINC01538-201ENST00000588074 RUSC1-AS1Q66K80 236 aa4.15□□□□□ -1.74
LINC01538-201ENST00000588074 UNQ9165/PRO28630Q6UXU0 137 aa4.15□□□□□ -1.74
LINC01538-201ENST00000588074 C16orf47Q6ZP98 133 aaPredicted RBP4.15□□□□□ -1.74
LINC01538-201ENST00000588074 ZNF524Q96C55 264 aa4.15□□□□□ -1.74
LINC01538-201ENST00000588074 MYOFQ9NZM1 2061 aa4.15□□□□□ -1.74
LINC01538-201ENST00000588074 TMEM30CPA0ZSE6 113 aa4.15□□□□□ -1.75
LINC01538-201ENST00000588074 EIF4EBP1Q13541 118 aaPredicted RBP4.15□□□□□ -1.75
LINC01538-201ENST00000588074 Q86TA4 180 aa4.15□□□□□ -1.75
LINC01538-201ENST00000588074 FAM216BQ8N7L0 139 aa4.15□□□□□ -1.75
LINC01538-201ENST00000588074 UBALD1Q8TB05 177 aa4.15□□□□□ -1.75
LINC01538-201ENST00000588074 PRAC1Q96KF2 57 aa4.15□□□□□ -1.75
LINC01538-201ENST00000588074 TRAV7A0A075B6U4 112 aa4.14□□□□□ -1.75
LINC01538-201ENST00000588074 DEFB103AP81534 67 aa4.14□□□□□ -1.75
LINC01538-201ENST00000588074 CIRBPQ14011 172 aaKnown RBP4.14□□□□□ -1.75
LINC01538-201ENST00000588074 TET1Q8NFU7 2136 aa4.14□□□□□ -1.75
LINC01538-201ENST00000588074 LTBP2Q14767 1821 aa4.14□□□□□ -1.75
LINC01538-201ENST00000588074 M0R378 163 aa4.14□□□□□ -1.75
LINC01538-201ENST00000588074 COX7A2P2O60397 106 aa4.14□□□□□ -1.75
LINC01538-201ENST00000588074 PRSS2P07478 247 aa4.14□□□□□ -1.75
LINC01538-201ENST00000588074 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms