RNA–Protein interactions for RNA: ENST00000585448.1

SMAD4-203, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-203ENST00000585448 PRNTQ86SH4 94 aa4.56□□□□□ -1.68
SMAD4-203ENST00000585448 LYPD1Q8N2G4 141 aa4.56□□□□□ -1.68
SMAD4-203ENST00000585448 FAM216BQ8N7L0 139 aa4.56□□□□□ -1.68
SMAD4-203ENST00000585448 THAP8Q8NA92 274 aa4.56□□□□□ -1.68
SMAD4-203ENST00000585448 Q9H3A6 140 aa4.56□□□□□ -1.68
SMAD4-203ENST00000585448 TMEM14BQ9NUH8 114 aa4.56□□□□□ -1.68
SMAD4-203ENST00000585448 TMEM14CQ9P0S9 112 aa4.56□□□□□ -1.68
SMAD4-203ENST00000585448 Q9Y3F1 56 aa4.56□□□□□ -1.68
SMAD4-203ENST00000585448 COL4A5P29400 1685 aa4.55□□□□□ -1.68
SMAD4-203ENST00000585448 TRAV3A0A0B4J244 114 aa4.55□□□□□ -1.68
SMAD4-203ENST00000585448 SDHAF1A6NFY7 115 aa4.55□□□□□ -1.68
SMAD4-203ENST00000585448 FSTL3O95633 263 aa4.55□□□□□ -1.68
SMAD4-203ENST00000585448 RNASE2P10153 161 aaKnown RBP4.55□□□□□ -1.68
SMAD4-203ENST00000585448 GATA1P15976 413 aaPredicted RBP4.55□□□□□ -1.68
SMAD4-203ENST00000585448 PRCDQ00LT1 54 aa4.55□□□□□ -1.68
SMAD4-203ENST00000585448 CD164L2Q6UWJ8 174 aa4.55□□□□□ -1.68
SMAD4-203ENST00000585448 ZCCHC24Q8N2G6 241 aaKnown RBP4.55□□□□□ -1.68
SMAD4-203ENST00000585448 TOMM6Q96B49 74 aa4.55□□□□□ -1.68
SMAD4-203ENST00000585448 RNF185Q96GF1 192 aa4.55□□□□□ -1.68
SMAD4-203ENST00000585448 SCGB3A1Q96QR1 104 aa4.55□□□□□ -1.68
SMAD4-203ENST00000585448 CNFNQ9BYD5 112 aa4.55□□□□□ -1.68
SMAD4-203ENST00000585448 KRTAP1-5Q9BYS1 174 aa4.55□□□□□ -1.68
SMAD4-203ENST00000585448 ZNF71Q9NQZ8 489 aaPredicted RBP4.55□□□□□ -1.68
SMAD4-203ENST00000585448 MYO9BQ13459 2157 aa4.54□□□□□ -1.68
SMAD4-203ENST00000585448 IGHV1-58A0A0C4DH39 117 aa4.54□□□□□ -1.68
SMAD4-203ENST00000585448 C11orf86A6NJI1 115 aa4.54□□□□□ -1.68
SMAD4-203ENST00000585448 J3QT63 122 aa4.54□□□□□ -1.68
SMAD4-203ENST00000585448 IGLV2-11P01706 119 aa4.54□□□□□ -1.68
SMAD4-203ENST00000585448 IGKV3-11P04433 115 aa4.54□□□□□ -1.68
SMAD4-203ENST00000585448 LGALS3P17931 250 aaKnown RBP4.54□□□□□ -1.68
SMAD4-203ENST00000585448 CD52P31358 61 aa4.54□□□□□ -1.68
SMAD4-203ENST00000585448 XCL1P47992 114 aa4.54□□□□□ -1.68
SMAD4-203ENST00000585448 DAZ2Q13117 558 aaKnown RBP4.54□□□□□ -1.68
SMAD4-203ENST00000585448 PMS2CLQ68D20 193 aa4.54□□□□□ -1.68
SMAD4-203ENST00000585448 PATE2Q6UY27 113 aa4.54□□□□□ -1.68
SMAD4-203ENST00000585448 DAZ4Q86SG3 579 aaKnown RBP4.54□□□□□ -1.68
SMAD4-203ENST00000585448 VKORC1L1Q8N0U8 176 aa4.54□□□□□ -1.68
SMAD4-203ENST00000585448 C17orf77Q96MU5 243 aa4.54□□□□□ -1.68
SMAD4-203ENST00000585448 DAZ3Q9NR90 486 aaKnown RBP4.54□□□□□ -1.68
SMAD4-203ENST00000585448 XCL2Q9UBD3 114 aa4.54□□□□□ -1.68
SMAD4-203ENST00000585448 IGKV1OR2-108A0A075B7D4 117 aa4.53□□□□□ -1.68
SMAD4-203ENST00000585448 IGLV3-32A0A0A0MS00 114 aa4.53□□□□□ -1.68
SMAD4-203ENST00000585448 IGHV1-69DA0A0B4J2H0 117 aa4.53□□□□□ -1.68
SMAD4-203ENST00000585448 TRBV10-3A0A0K0K1G6 114 aa4.53□□□□□ -1.68
SMAD4-203ENST00000585448 SMKR1H3BMG3 65 aa4.53□□□□□ -1.68
SMAD4-203ENST00000585448 M0R1B8 84 aa4.53□□□□□ -1.68
SMAD4-203ENST00000585448 NDUFB3O43676 98 aa4.53□□□□□ -1.68
SMAD4-203ENST00000585448 TIMM17BO60830 172 aa4.53□□□□□ -1.68
SMAD4-203ENST00000585448 CCKP06307 115 aa4.53□□□□□ -1.68
SMAD4-203ENST00000585448 GP9P14770 177 aa4.53□□□□□ -1.68
SMAD4-203ENST00000585448 ERHP84090 104 aaKnown RBP4.53□□□□□ -1.68
SMAD4-203ENST00000585448 KLKP1Q107X0 134 aa4.53□□□□□ -1.68
SMAD4-203ENST00000585448 NSUN5P1Q3KNT7 163 aa4.53□□□□□ -1.68
SMAD4-203ENST00000585448 FAM53AQ6NSI3 398 aaPredicted RBP4.53□□□□□ -1.68
SMAD4-203ENST00000585448 C16orf47Q6ZP98 133 aaPredicted RBP4.53□□□□□ -1.68
SMAD4-203ENST00000585448 DYNAPQ8N1N2 210 aa4.53□□□□□ -1.68
SMAD4-203ENST00000585448 PROK2Q9HC23 129 aa4.53□□□□□ -1.68
SMAD4-203ENST00000585448 COL4A6Q14031 1691 aa4.53□□□□□ -1.68
SMAD4-203ENST00000585448 AGRNO00468 2067 aa4.53□□□□□ -1.68
SMAD4-203ENST00000585448 TRAV7A0A075B6U4 112 aa4.52□□□□□ -1.69
SMAD4-203ENST00000585448 KRTAP29-1A8MX34 341 aaPredicted RBP4.52□□□□□ -1.69
SMAD4-203ENST00000585448 C12orf77C9JDV5 145 aa4.52□□□□□ -1.69
SMAD4-203ENST00000585448 H7BZZ5 65 aa4.52□□□□□ -1.69
SMAD4-203ENST00000585448 H7C2G1 150 aa4.52□□□□□ -1.69
SMAD4-203ENST00000585448 M0R3E3 92 aa4.52□□□□□ -1.69
SMAD4-203ENST00000585448 LEPROTO15243 131 aa4.52□□□□□ -1.69
SMAD4-203ENST00000585448 NXPH4O95158 308 aa4.52□□□□□ -1.69
SMAD4-203ENST00000585448 SAA4P35542 130 aa4.52□□□□□ -1.69
SMAD4-203ENST00000585448 SNRPD3P62318 126 aaKnown RBP4.52□□□□□ -1.69
SMAD4-203ENST00000585448 GFRALQ6UXV0 394 aa4.52□□□□□ -1.69
SMAD4-203ENST00000585448 MUSTN1Q8IVN3 82 aa4.52□□□□□ -1.69
SMAD4-203ENST00000585448 EEF1AKMT3Q96AZ1 226 aa4.52□□□□□ -1.69
SMAD4-203ENST00000585448 UBE2D4Q9Y2X8 147 aa4.52□□□□□ -1.69
SMAD4-203ENST00000585448 TANC2Q9HCD6 1990 aa4.52□□□□□ -1.69
SMAD4-203ENST00000585448 GOLGA4Q13439 2230 aaKnown RBP4.52□□□□□ -1.69
SMAD4-203ENST00000585448 LRP4O75096 1905 aa4.51□□□□□ -1.69
SMAD4-203ENST00000585448 IGHV1-45A0A0A0MS14 117 aa4.51□□□□□ -1.69
SMAD4-203ENST00000585448 FAM223BA6NKX1 122 aa4.51□□□□□ -1.69
SMAD4-203ENST00000585448 LYRM9A8MSI8 78 aa4.51□□□□□ -1.69
SMAD4-203ENST00000585448 IBA57-AS1B1ANH7 110 aa4.51□□□□□ -1.69
SMAD4-203ENST00000585448 SH2D1AO60880 128 aa4.51□□□□□ -1.69
SMAD4-203ENST00000585448 PPP1R17O96001 155 aa4.51□□□□□ -1.69
SMAD4-203ENST00000585448 PRSS2P07478 247 aa4.51□□□□□ -1.69
SMAD4-203ENST00000585448 ZNF32P17041 273 aa4.51□□□□□ -1.69
SMAD4-203ENST00000585448 RBM3P98179 157 aaKnown RBP4.51□□□□□ -1.69
SMAD4-203ENST00000585448 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.51□□□□□ -1.69
SMAD4-203ENST00000585448 ZNF826PQ6ZT77 177 aa4.51□□□□□ -1.69
SMAD4-203ENST00000585448 FAM223AQ8IWN6 122 aa4.51□□□□□ -1.69
SMAD4-203ENST00000585448 TMEM141Q96I45 108 aa4.51□□□□□ -1.69
SMAD4-203ENST00000585448 DEFB118Q96PH6 123 aa4.51□□□□□ -1.69
SMAD4-203ENST00000585448 FGF23Q9GZV9 251 aaPredicted RBP4.51□□□□□ -1.69
SMAD4-203ENST00000585448 Q9UF83 564 aa4.51□□□□□ -1.69
SMAD4-203ENST00000585448 ZNF580Q9UK33 172 aa4.51□□□□□ -1.69
SMAD4-203ENST00000585448 MOB4Q9Y3A3 225 aa4.51□□□□□ -1.69
SMAD4-203ENST00000585448 IGLV5-52A0A0A0MRZ9 124 aa4.5□□□□□ -1.69
SMAD4-203ENST00000585448 TRAV8-3A0A0A6YYJ7 113 aa4.5□□□□□ -1.69
SMAD4-203ENST00000585448 TRAV13-2A0A0B4J235 113 aa4.5□□□□□ -1.69
SMAD4-203ENST00000585448 DNAL4O96015 105 aa4.5□□□□□ -1.69
SMAD4-203ENST00000585448 MAGEA5P43359 124 aa4.5□□□□□ -1.69
SMAD4-203ENST00000585448 CRIP1P50238 77 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms