RNA–Protein interactions for RNA: ENST00000578922.1

SMG8-203, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

BASIC

Gene SMG8, Length 2,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-203ENST00000578922 LGALS9BQ3B8N2 356 aa15.22■□□□□ 0.03
SMG8-203ENST00000578922 LGALS9CQ6DKI2 356 aa15.22■□□□□ 0.03
SMG8-203ENST00000578922 DEFB125Q8N687 156 aa15.22■□□□□ 0.03
SMG8-203ENST00000578922 F6UB75 175 aa15.21■□□□□ 0.03
SMG8-203ENST00000578922 OR9G4Q8NGQ1 327 aa15.21■□□□□ 0.03
SMG8-203ENST00000578922 TIMM8BQ9Y5J9 83 aaPredicted RBP15.21■□□□□ 0.03
SMG8-203ENST00000578922 TSSC4Q9Y5U2 329 aaPredicted RBP15.21■□□□□ 0.03
SMG8-203ENST00000578922 PROK1P58294 105 aa15.21■□□□□ 0.02
SMG8-203ENST00000578922 TMEM78Q5T7P6 136 aa15.21■□□□□ 0.02
SMG8-203ENST00000578922 DCANP1Q8TF63 244 aa15.21■□□□□ 0.02
SMG8-203ENST00000578922 RBAKDNA6NC62 111 aa15.2■□□□□ 0.02
SMG8-203ENST00000578922 MCRIP2Q9BUT9 160 aaKnown RBP15.2■□□□□ 0.02
SMG8-203ENST00000578922 CNFNQ9BYD5 112 aa15.2■□□□□ 0.02
SMG8-203ENST00000578922 FABP5P3A8MUU1 101 aa15.19■□□□□ 0.02
SMG8-203ENST00000578922 CCL24O00175 119 aa15.19■□□□□ 0.02
SMG8-203ENST00000578922 HBDP02042 147 aa15.19■□□□□ 0.02
SMG8-203ENST00000578922 PPBPP02775 128 aa15.19■□□□□ 0.02
SMG8-203ENST00000578922 ZNF80P51504 273 aaPredicted RBP15.19■□□□□ 0.02
SMG8-203ENST00000578922 NIPBLQ6KC79 2804 aaeCLIP15.19■□□□□ 0.02
SMG8-203ENST00000578922 LOC389332A0A1B0GUA5 103 aa15.19■□□□□ 0.02
SMG8-203ENST00000578922 CYSRT1A8MQ03 144 aa15.19■□□□□ 0.02
SMG8-203ENST00000578922 CKS2P33552 79 aa15.19■□□□□ 0.02
SMG8-203ENST00000578922 TWIST1Q15672 202 aa15.19■□□□□ 0.02
SMG8-203ENST00000578922 PEMTQ9UBM1 199 aa15.19■□□□□ 0.02
SMG8-203ENST00000578922 TAX1BP3O14907 124 aa15.18■□□□□ 0.02
SMG8-203ENST00000578922 Q6ZVH6 145 aa15.18■□□□□ 0.02
SMG8-203ENST00000578922 NCR2O95944 276 aa15.18■□□□□ 0.02
SMG8-203ENST00000578922 ZNF688P0C7X2 276 aa15.18■□□□□ 0.02
SMG8-203ENST00000578922 NSUN5P1Q3KNT7 163 aa15.18■□□□□ 0.02
SMG8-203ENST00000578922 TP73-AS1Q9UF72 201 aa15.18■□□□□ 0.02
SMG8-203ENST00000578922 K7EP13 123 aa15.17■□□□□ 0.02
SMG8-203ENST00000578922 ID1P41134 155 aa15.17■□□□□ 0.02
SMG8-203ENST00000578922 OR8A1Q8NGG7 326 aa15.17■□□□□ 0.02
SMG8-203ENST00000578922 WFDC12Q8WWY7 111 aa15.17■□□□□ 0.02
SMG8-203ENST00000578922 JMJD1CQ15652 2540 aa15.17■□□□□ 0.02
SMG8-203ENST00000578922 J3KRW8 73 aa15.17■□□□□ 0.02
SMG8-203ENST00000578922 C9orf47Q6ZRZ4 202 aa15.17■□□□□ 0.02
SMG8-203ENST00000578922 OR10J6PQ8NGY7 276 aa15.17■□□□□ 0.02
SMG8-203ENST00000578922 MUC21A0A0G2JKD1 596 aa15.16■□□□□ 0.02
SMG8-203ENST00000578922 MUC21A0A140T8X8 626 aa15.16■□□□□ 0.02
SMG8-203ENST00000578922 KRTAP10-3P60369 221 aa15.16■□□□□ 0.02
SMG8-203ENST00000578922 VAMP3Q15836 100 aa15.16■□□□□ 0.02
SMG8-203ENST00000578922 LINC01559Q495D7 138 aa15.16■□□□□ 0.02
SMG8-203ENST00000578922 PSMG4Q5JS54 123 aa15.16■□□□□ 0.02
SMG8-203ENST00000578922 MUC21Q5SSG8 566 aa15.16■□□□□ 0.02
SMG8-203ENST00000578922 LINC01546A6NGU7 62 aa15.15■□□□□ 0.02
SMG8-203ENST00000578922 OVOL1O14753 267 aa15.15■□□□□ 0.02
SMG8-203ENST00000578922 ORM1P02763 201 aa15.15■□□□□ 0.02
SMG8-203ENST00000578922 FHL3Q13643 280 aa15.15■□□□□ 0.02
SMG8-203ENST00000578922 ZNF575Q86XF7 245 aa15.15■□□□□ 0.02
SMG8-203ENST00000578922 SORL1Q92673 2214 aa15.15■□□□□ 0.02
SMG8-203ENST00000578922 DYNLRB2Q8TF09 96 aa15.15■□□□□ 0.02
SMG8-203ENST00000578922 NPYP01303 97 aa15.14■□□□□ 0.01
SMG8-203ENST00000578922 C2orf91Q6ZV80 131 aa15.14■□□□□ 0.01
SMG8-203ENST00000578922 OR4C5Q8NGB2 326 aa15.14■□□□□ 0.01
SMG8-203ENST00000578922 IFI27L1Q96BM0 104 aa15.14■□□□□ 0.01
SMG8-203ENST00000578922 MAP1LC3AQ9H492 121 aa15.14■□□□□ 0.01
SMG8-203ENST00000578922 K7EQG2 157 aa15.14■□□□□ 0.01
SMG8-203ENST00000578922 SEC11AP67812 179 aa15.14■□□□□ 0.01
SMG8-203ENST00000578922 SNRPD3P62318 126 aaKnown RBP15.12■□□□□ 0.01
SMG8-203ENST00000578922 Q6ZQT7 251 aa15.12■□□□□ 0.01
SMG8-203ENST00000578922 TMEM61Q8N0U2 210 aa15.12■□□□□ 0.01
SMG8-203ENST00000578922 RNF185Q96GF1 192 aa15.12■□□□□ 0.01
SMG8-203ENST00000578922 ADARB2-AS1A8MUL3 147 aa15.12■□□□□ 0.01
SMG8-203ENST00000578922 SIVA1O15304 175 aa15.12■□□□□ 0.01
SMG8-203ENST00000578922 FGF6P10767 208 aa15.12■□□□□ 0.01
SMG8-203ENST00000578922 SAMD13Q5VXD3 122 aa15.12■□□□□ 0.01
SMG8-203ENST00000578922 NXT2Q9NPJ8 142 aaKnown RBP15.12■□□□□ 0.01
SMG8-203ENST00000578922 TEP1Q99973 2627 aaKnown RBP15.12■□□□□ 0.01
SMG8-203ENST00000578922 CACNG7P62955 275 aa15.11■□□□□ 0.01
SMG8-203ENST00000578922 PRR9Q5T870 116 aa15.11■□□□□ 0.01
SMG8-203ENST00000578922 BOD1L2Q8IYS8 172 aa15.11■□□□□ 0.01
SMG8-203ENST00000578922 ANKRD39Q53RE8 183 aa15.11■□□□□ 0.01
SMG8-203ENST00000578922 TMEM97Q5BJF2 176 aa15.11■□□□□ 0.01
SMG8-203ENST00000578922 LINC00477Q96M19 166 aa15.11■□□□□ 0.01
SMG8-203ENST00000578922 SMKR1H3BMG3 65 aa15.09■□□□□ 0.01
SMG8-203ENST00000578922 IGKV3-20P01619 116 aa15.09■□□□□ 0.01
SMG8-203ENST00000578922 DEFB114Q30KQ6 69 aa15.09■□□□□ 0.01
SMG8-203ENST00000578922 CD300EQ496F6 205 aaPredicted RBP15.09■□□□□ 0.01
SMG8-203ENST00000578922 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.09■□□□□ 0.01
SMG8-203ENST00000578922 FCER1GP30273 86 aa15.08■□□□□ 0.01
SMG8-203ENST00000578922 KIR3DS1Q14943 382 aa15.08■□□□□ 0.01
SMG8-203ENST00000578922 MSRB1Q9NZV6 116 aa15.08■□□□□ 0
SMG8-203ENST00000578922 ZFAND2AQ8N6M9 145 aa15.07■□□□□ 0
SMG8-203ENST00000578922 C11orf21Q9P2W6 132 aa15.07■□□□□ 0
SMG8-203ENST00000578922 TNFRSF6BO95407 300 aa15.07■□□□□ 0
SMG8-203ENST00000578922 AGRNO00468 2067 aa15.06■□□□□ 0
SMG8-203ENST00000578922 TENM1Q9UKZ4 2725 aa15.06■□□□□ 0
SMG8-203ENST00000578922 A6NDN8 102 aa15.06■□□□□ 0
SMG8-203ENST00000578922 CBY3A6NI87 242 aa15.06■□□□□ 0
SMG8-203ENST00000578922 RNASE8Q8TDE3 154 aaKnown RBP15.05■□□□□ 0
SMG8-203ENST00000578922 LENEPQ9Y5L5 61 aa15.05■□□□□ 0
SMG8-203ENST00000578922 IGKV3D-20A0A0C4DH25 116 aa15.05■□□□□ -0
SMG8-203ENST00000578922 C7orf71A4D174 169 aa15.05■□□□□ -0
SMG8-203ENST00000578922 RNASE4P34096 147 aaKnown RBP15.05■□□□□ -0
SMG8-203ENST00000578922 DEFB131AP59861 70 aa15.05■□□□□ -0
SMG8-203ENST00000578922 HSD52Q0P140 79 aa15.05■□□□□ -0
SMG8-203ENST00000578922 SMIM15Q7Z3B0 74 aa15.05■□□□□ -0
SMG8-203ENST00000578922 A0A0J9YX75 114 aa15.04■□□□□ -0
SMG8-203ENST00000578922 FXYD7P58549 80 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 120.7 ms