RNA–Protein interactions for RNA: ENST00000578525.5

CDK5RAP3-208, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 564 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-208ENST00000578525 C9orf85Q96MD7 179 aa6.97□□□□□ -1.29
CDK5RAP3-208ENST00000578525 Q96MF0 132 aa6.97□□□□□ -1.29
CDK5RAP3-208ENST00000578525 HHLA3Q9XRX5 114 aa6.97□□□□□ -1.29
CDK5RAP3-208ENST00000578525 IGHV3-16A0A0C4DH30 117 aa6.96□□□□□ -1.3
CDK5RAP3-208ENST00000578525 CBY3A6NI87 242 aa6.96□□□□□ -1.3
CDK5RAP3-208ENST00000578525 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.96□□□□□ -1.3
CDK5RAP3-208ENST00000578525 PTTG1IPP53801 180 aa6.96□□□□□ -1.3
CDK5RAP3-208ENST00000578525 TCTAP57738 103 aa6.96□□□□□ -1.3
CDK5RAP3-208ENST00000578525 FOXI2Q6ZQN5 318 aa6.96□□□□□ -1.3
CDK5RAP3-208ENST00000578525 SYT8Q8NBV8 401 aa6.96□□□□□ -1.3
CDK5RAP3-208ENST00000578525 WFDC12Q8WWY7 111 aa6.96□□□□□ -1.3
CDK5RAP3-208ENST00000578525 SCGB3A1Q96QR1 104 aa6.96□□□□□ -1.3
CDK5RAP3-208ENST00000578525 MRPL35Q9NZE8 188 aaKnown RBP6.96□□□□□ -1.3
CDK5RAP3-208ENST00000578525 HIGD1BQ9P298 99 aa6.96□□□□□ -1.3
CDK5RAP3-208ENST00000578525 CR1P17927 2039 aa6.95□□□□□ -1.3
CDK5RAP3-208ENST00000578525 IGHV1OR15-1A0A075B7D0 117 aa6.95□□□□□ -1.3
CDK5RAP3-208ENST00000578525 TRAV2A0A0B4J234 112 aa6.95□□□□□ -1.3
CDK5RAP3-208ENST00000578525 A6NDN8 102 aa6.95□□□□□ -1.3
CDK5RAP3-208ENST00000578525 H7C1H1 209 aa6.95□□□□□ -1.3
CDK5RAP3-208ENST00000578525 CCL25O15444 150 aa6.95□□□□□ -1.3
CDK5RAP3-208ENST00000578525 PLNP26678 52 aa6.95□□□□□ -1.3
CDK5RAP3-208ENST00000578525 CDKN1BP46527 198 aa6.95□□□□□ -1.3
CDK5RAP3-208ENST00000578525 VAMP3Q15836 100 aa6.95□□□□□ -1.3
CDK5RAP3-208ENST00000578525 ZC2HC1BQ5TFG8 222 aa6.95□□□□□ -1.3
CDK5RAP3-208ENST00000578525 SUMO4Q6EEV6 95 aa6.95□□□□□ -1.3
CDK5RAP3-208ENST00000578525 ADAMTSL5Q6ZMM2 481 aa6.95□□□□□ -1.3
CDK5RAP3-208ENST00000578525 GTSCR1Q86UQ5 136 aa6.95□□□□□ -1.3
CDK5RAP3-208ENST00000578525 CSTL1Q9H114 145 aa6.95□□□□□ -1.3
CDK5RAP3-208ENST00000578525 TMEM160Q9NX00 188 aa6.95□□□□□ -1.3
CDK5RAP3-208ENST00000578525 PKD1L2Q7Z442 2459 aa6.95□□□□□ -1.3
CDK5RAP3-208ENST00000578525 TRGV11A0A075B6L2 103 aa6.94□□□□□ -1.3
CDK5RAP3-208ENST00000578525 IGKV2D-26A0A0A0MRZ7 120 aa6.94□□□□□ -1.3
CDK5RAP3-208ENST00000578525 LINC01549A6NIU2 74 aa6.94□□□□□ -1.3
CDK5RAP3-208ENST00000578525 F8VRH5 84 aa6.94□□□□□ -1.3
CDK5RAP3-208ENST00000578525 LINC01619G3V211 115 aa6.94□□□□□ -1.3
CDK5RAP3-208ENST00000578525 H3BRM9 83 aa6.94□□□□□ -1.3
CDK5RAP3-208ENST00000578525 IGKV3-20P01619 116 aa6.94□□□□□ -1.3
CDK5RAP3-208ENST00000578525 SLURP1P55000 103 aa6.94□□□□□ -1.3
CDK5RAP3-208ENST00000578525 TCTEX1D4Q5JR98 221 aa6.94□□□□□ -1.3
CDK5RAP3-208ENST00000578525 AMTNQ6UX39 209 aa6.94□□□□□ -1.3
CDK5RAP3-208ENST00000578525 C2orf66Q6UXQ4 117 aa6.94□□□□□ -1.3
CDK5RAP3-208ENST00000578525 KRTAP1-3Q8IUG1 177 aa6.94□□□□□ -1.3
CDK5RAP3-208ENST00000578525 TMEM86BQ8N661 226 aa6.94□□□□□ -1.3
CDK5RAP3-208ENST00000578525 TEX29Q8N6K0 151 aa6.94□□□□□ -1.3
CDK5RAP3-208ENST00000578525 NEXN-AS1Q8NBZ9 246 aa6.94□□□□□ -1.3
CDK5RAP3-208ENST00000578525 DUX5Q96PT3 197 aa6.94□□□□□ -1.3
CDK5RAP3-208ENST00000578525 CHTOPQ9Y3Y2 248 aaKnown RBP6.94□□□□□ -1.3
CDK5RAP3-208ENST00000578525 CACNA1AO00555 2505 aa6.93□□□□□ -1.3
CDK5RAP3-208ENST00000578525 TRAV12-2A0A075B6T6 113 aa6.93□□□□□ -1.3
CDK5RAP3-208ENST00000578525 TRBV6-5A0A0K0K1A5 114 aa6.93□□□□□ -1.3
CDK5RAP3-208ENST00000578525 A8MTW9 85 aa6.93□□□□□ -1.3
CDK5RAP3-208ENST00000578525 POLR2KP53803 58 aaKnown RBP6.93□□□□□ -1.3
CDK5RAP3-208ENST00000578525 SPINK13Q1W4C9 94 aa6.93□□□□□ -1.3
CDK5RAP3-208ENST00000578525 C4orf3Q8WVX3 66 aa6.93□□□□□ -1.3
CDK5RAP3-208ENST00000578525 JPT2Q9H910 190 aa6.93□□□□□ -1.3
CDK5RAP3-208ENST00000578525 PEMTQ9UBM1 199 aa6.93□□□□□ -1.3
CDK5RAP3-208ENST00000578525 CYSLTR1Q9Y271 337 aa6.93□□□□□ -1.3
CDK5RAP3-208ENST00000578525 DOPEY1Q5JWR5 2465 aa6.92□□□□□ -1.3
CDK5RAP3-208ENST00000578525 AKAP6Q13023 2319 aa6.92□□□□□ -1.3
CDK5RAP3-208ENST00000578525 A0A087WWL8 130 aa6.92□□□□□ -1.3
CDK5RAP3-208ENST00000578525 F5H697 171 aa6.92□□□□□ -1.3
CDK5RAP3-208ENST00000578525 VCYO14598 125 aa6.92□□□□□ -1.3
CDK5RAP3-208ENST00000578525 C18orf65Q6ZTR6 163 aa6.92□□□□□ -1.3
CDK5RAP3-208ENST00000578525 ERASQ7Z444 233 aa6.92□□□□□ -1.3
CDK5RAP3-208ENST00000578525 Q8N1Y9 231 aa6.92□□□□□ -1.3
CDK5RAP3-208ENST00000578525 BAALCQ8WXS3 180 aa6.92□□□□□ -1.3
CDK5RAP3-208ENST00000578525 CHAC1Q9BUX1 264 aa6.92□□□□□ -1.3
CDK5RAP3-208ENST00000578525 MDFICQ9P1T7 246 aa6.92□□□□□ -1.3
CDK5RAP3-208ENST00000578525 CACNA1BQ00975 2339 aa6.92□□□□□ -1.3
CDK5RAP3-208ENST00000578525 ITPR1Q14643 2758 aa6.91□□□□□ -1.3
CDK5RAP3-208ENST00000578525 CHD8Q9HCK8 2581 aa6.91□□□□□ -1.3
CDK5RAP3-208ENST00000578525 C9orf118A6NHY6 69 aa6.91□□□□□ -1.3
CDK5RAP3-208ENST00000578525 KNCNA6PVL3 124 aa6.91□□□□□ -1.3
CDK5RAP3-208ENST00000578525 RIPPLY3P57055 190 aa6.91□□□□□ -1.3
CDK5RAP3-208ENST00000578525 DEFB131AP59861 70 aa6.91□□□□□ -1.3
CDK5RAP3-208ENST00000578525 DEFB136Q30KP8 78 aa6.91□□□□□ -1.3
CDK5RAP3-208ENST00000578525 ZFP2Q6ZN57 461 aa6.91□□□□□ -1.3
CDK5RAP3-208ENST00000578525 NEGR1Q7Z3B1 354 aa6.91□□□□□ -1.3
CDK5RAP3-208ENST00000578525 OR4C5Q8NGB2 326 aa6.91□□□□□ -1.3
CDK5RAP3-208ENST00000578525 JMJD8Q96S16 334 aa6.91□□□□□ -1.3
CDK5RAP3-208ENST00000578525 TTTY13Q9BZ97 58 aa6.91□□□□□ -1.3
CDK5RAP3-208ENST00000578525 ZNF256Q9Y2P7 627 aaPredicted RBP6.91□□□□□ -1.3
CDK5RAP3-208ENST00000578525 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.91□□□□□ -1.34e-7■■□□□ 13.8
CDK5RAP3-208ENST00000578525 PRRC2AP48634 2157 aaKnown RBP6.91□□□□□ -1.3
CDK5RAP3-208ENST00000578525 TRBV25-1A0A075B6N4 114 aa6.9□□□□□ -1.3
CDK5RAP3-208ENST00000578525 TRAV8-6A0A0B4J262 113 aa6.9□□□□□ -1.3
CDK5RAP3-208ENST00000578525 SDHAF1A6NFY7 115 aa6.9□□□□□ -1.3
CDK5RAP3-208ENST00000578525 CRYGDP07320 174 aa6.9□□□□□ -1.3
CDK5RAP3-208ENST00000578525 ZNF56Q15929 161 aa6.9□□□□□ -1.3
CDK5RAP3-208ENST00000578525 TAL2Q16559 108 aa6.9□□□□□ -1.3
CDK5RAP3-208ENST00000578525 AMMECR1LQ6DCA0 310 aa6.9□□□□□ -1.3
CDK5RAP3-208ENST00000578525 TRPT1Q86TN4 253 aaKnown RBP6.9□□□□□ -1.3
CDK5RAP3-208ENST00000578525 OR11H1Q8NG94 326 aa6.9□□□□□ -1.3
CDK5RAP3-208ENST00000578525 DYNLRB2Q8TF09 96 aa6.9□□□□□ -1.3
CDK5RAP3-208ENST00000578525 TMEM141Q96I45 108 aa6.9□□□□□ -1.3
CDK5RAP3-208ENST00000578525 KIR2DL4Q99706 377 aa6.9□□□□□ -1.3
CDK5RAP3-208ENST00000578525 TP53TG1Q9Y2A0 90 aa6.9□□□□□ -1.3
CDK5RAP3-208ENST00000578525 TRBV27A0A0K0K1C4 114 aa6.89□□□□□ -1.31
CDK5RAP3-208ENST00000578525 RBMY1BA6NDE4 496 aaKnown RBP6.89□□□□□ -1.31
CDK5RAP3-208ENST00000578525 RBMY1EA6NEQ0 496 aaKnown RBP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms