RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 PRR27Q6MZM9 219 aa10.56□□□□□ -0.72
SMG6-220ENST00000576218 Q6ZR54 194 aa10.56□□□□□ -0.72
SMG6-220ENST00000576218 PRADC1Q9BSG0 188 aa10.56□□□□□ -0.72
SMG6-220ENST00000576218 TRAV1-1A0A0B4J248 108 aa10.55□□□□□ -0.72
SMG6-220ENST00000576218 PGPEP1LA6NFU8 196 aa10.55□□□□□ -0.72
SMG6-220ENST00000576218 K7EQD1 137 aa10.55□□□□□ -0.72
SMG6-220ENST00000576218 CIDEAO60543 219 aa10.55□□□□□ -0.72
SMG6-220ENST00000576218 RNASE3P12724 160 aaKnown RBP10.55□□□□□ -0.72
SMG6-220ENST00000576218 CCL20P78556 96 aa10.55□□□□□ -0.72
SMG6-220ENST00000576218 CFAP126Q5VTH2 177 aa10.55□□□□□ -0.72
SMG6-220ENST00000576218 C9orf62Q8N4C0 152 aa10.55□□□□□ -0.72
SMG6-220ENST00000576218 UPK3BQ9BT76 320 aa10.55□□□□□ -0.72
SMG6-220ENST00000576218 PHLDA3Q9Y5J5 127 aa10.55□□□□□ -0.72
SMG6-220ENST00000576218 VPS13DQ5THJ4 4388 aa10.55□□□□□ -0.72
SMG6-220ENST00000576218 KRBOX1C9JBD0 128 aa10.54□□□□□ -0.72
SMG6-220ENST00000576218 RS1O15537 224 aa10.54□□□□□ -0.72
SMG6-220ENST00000576218 NXPH4O95158 308 aa10.54□□□□□ -0.72
SMG6-220ENST00000576218 ZNF674Q2M3X9 581 aa10.54□□□□□ -0.72
SMG6-220ENST00000576218 COX8CQ7Z4L0 72 aa10.54□□□□□ -0.72
SMG6-220ENST00000576218 C6orf223Q8N319 242 aa10.54□□□□□ -0.72
SMG6-220ENST00000576218 IL36BQ9NZH7 164 aa10.54□□□□□ -0.72
SMG6-220ENST00000576218 A8MWV9 139 aa10.53□□□□□ -0.72
SMG6-220ENST00000576218 RTL8CO15255 209 aa10.53□□□□□ -0.72
SMG6-220ENST00000576218 SIVA1O15304 175 aa10.53□□□□□ -0.72
SMG6-220ENST00000576218 ARMS2P0C7Q2 107 aa10.53□□□□□ -0.72
SMG6-220ENST00000576218 GATA1P15976 413 aaPredicted RBP10.53□□□□□ -0.72
SMG6-220ENST00000576218 RPL35P42766 123 aaKnown RBP10.53□□□□□ -0.72
SMG6-220ENST00000576218 CRIP1P50238 77 aa10.53□□□□□ -0.72
SMG6-220ENST00000576218 RHOHQ15669 191 aa10.53□□□□□ -0.72
SMG6-220ENST00000576218 LINC01559Q495D7 138 aa10.53□□□□□ -0.72
SMG6-220ENST00000576218 SH2D6Q7Z4S9 175 aa10.53□□□□□ -0.72
SMG6-220ENST00000576218 M0R381 172 aa10.52□□□□□ -0.73
SMG6-220ENST00000576218 PDE6DO43924 150 aa10.52□□□□□ -0.73
SMG6-220ENST00000576218 MGST1P10620 155 aaKnown RBP10.52□□□□□ -0.73
SMG6-220ENST00000576218 MEF2BQ02080 365 aaPredicted RBP10.52□□□□□ -0.73
SMG6-220ENST00000576218 LYPD5Q6UWN5 251 aa10.52□□□□□ -0.73
SMG6-220ENST00000576218 ALKAL2Q6UX46 152 aa10.52□□□□□ -0.73
SMG6-220ENST00000576218 PTH2Q96A98 100 aa10.52□□□□□ -0.73
SMG6-220ENST00000576218 LOC100131303A0A0U1RQF7 123 aa10.51□□□□□ -0.73
SMG6-220ENST00000576218 BCL2P10415 239 aa10.51□□□□□ -0.73
SMG6-220ENST00000576218 FAM74A4Q5TZK3 123 aa10.51□□□□□ -0.73
SMG6-220ENST00000576218 DAZAP1Q96EP5 407 aaKnown RBP10.51□□□□□ -0.73
SMG6-220ENST00000576218 MED9Q9NWA0 146 aa10.51□□□□□ -0.73
SMG6-220ENST00000576218 A0A1B0GVG6 124 aa10.5□□□□□ -0.73
SMG6-220ENST00000576218 TRBV6-4A0A1B0GX49 114 aa10.5□□□□□ -0.73
SMG6-220ENST00000576218 A0A1W2PPQ1 181 aa10.5□□□□□ -0.73
SMG6-220ENST00000576218 TAGLN2P37802 199 aaKnown RBP10.5□□□□□ -0.73
SMG6-220ENST00000576218 GNG4P50150 75 aa10.5□□□□□ -0.73
SMG6-220ENST00000576218 NKX2-5P52952 324 aaPredicted RBP10.5□□□□□ -0.73
SMG6-220ENST00000576218 BLOC1S1P78537 153 aa10.5□□□□□ -0.73
SMG6-220ENST00000576218 CENPWQ5EE01 88 aa10.5□□□□□ -0.73
SMG6-220ENST00000576218 ZFP82Q8N141 532 aa10.5□□□□□ -0.73
SMG6-220ENST00000576218 SLC25A29Q8N8R3 303 aa10.5□□□□□ -0.73
SMG6-220ENST00000576218 C11orf52Q96A22 123 aa10.5□□□□□ -0.73
SMG6-220ENST00000576218 DERL1Q9BUN8 251 aa10.5□□□□□ -0.73
SMG6-220ENST00000576218 PARLQ9H300 379 aa10.5□□□□□ -0.73
SMG6-220ENST00000576218 VAX2Q9UIW0 290 aa10.5□□□□□ -0.73
SMG6-220ENST00000576218 DNAH6Q9C0G6 4158 aa10.49□□□□□ -0.73
SMG6-220ENST00000576218 RHODO00212 210 aa10.49□□□□□ -0.73
SMG6-220ENST00000576218 RPL19P84098 196 aaKnown RBP10.49□□□□□ -0.73
SMG6-220ENST00000576218 PIK3CD-AS1Q5SR53 167 aa10.49□□□□□ -0.73
SMG6-220ENST00000576218 DNLZQ5SXM8 178 aa10.49□□□□□ -0.73
SMG6-220ENST00000576218 DMRTA1Q5VZB9 504 aa10.49□□□□□ -0.73
SMG6-220ENST00000576218 EPPK1P58107 5090 aaKnown RBP10.48□□□□□ -0.73
SMG6-220ENST00000576218 TRAV9-2A0A087WT02 112 aa10.48□□□□□ -0.73
SMG6-220ENST00000576218 ZFP2Q6ZN57 461 aa10.48□□□□□ -0.73
SMG6-220ENST00000576218 LY96Q9Y6Y9 160 aa10.48□□□□□ -0.73
SMG6-220ENST00000576218 A0A087WWL8 130 aa10.47□□□□□ -0.73
SMG6-220ENST00000576218 EVI2AP22794 236 aa10.47□□□□□ -0.73
SMG6-220ENST00000576218 SPANXN1Q5VSR9 72 aa10.47□□□□□ -0.73
SMG6-220ENST00000576218 MLST8Q9BVC4 326 aa10.47□□□□□ -0.73
SMG6-220ENST00000576218 TPPP3Q9BW30 176 aa10.47□□□□□ -0.73
SMG6-220ENST00000576218 JPT2Q9H910 190 aa10.47□□□□□ -0.73
SMG6-220ENST00000576218 BIN3Q9NQY0 253 aa10.47□□□□□ -0.73
SMG6-220ENST00000576218 TRAV8-6A0A0B4J262 113 aa10.46□□□□□ -0.73
SMG6-220ENST00000576218 RAB19A4D1S5 217 aa10.46□□□□□ -0.73
SMG6-220ENST00000576218 GAGE12JA6NER3 117 aa10.46□□□□□ -0.73
SMG6-220ENST00000576218 MED14OSP0DP75 135 aa10.46□□□□□ -0.73
SMG6-220ENST00000576218 SSTP61278 116 aa10.46□□□□□ -0.73
SMG6-220ENST00000576218 GAGE1Q13065 139 aa10.46□□□□□ -0.73
SMG6-220ENST00000576218 GAGE4Q13068 117 aa10.46□□□□□ -0.73
SMG6-220ENST00000576218 GAGE5Q13069 117 aa10.46□□□□□ -0.73
SMG6-220ENST00000576218 GAGE13Q4V321 117 aa10.46□□□□□ -0.73
SMG6-220ENST00000576218 OR10J3Q5JRS4 329 aa10.46□□□□□ -0.73
SMG6-220ENST00000576218 WFDC10BQ8IUB3 73 aa10.46□□□□□ -0.73
SMG6-220ENST00000576218 KRTAP1-5Q9BYS1 174 aa10.46□□□□□ -0.73
SMG6-220ENST00000576218 CXCL1P09341 107 aa10.45□□□□□ -0.74
SMG6-220ENST00000576218 ATP6V0E2Q8NHE4 81 aa10.45□□□□□ -0.74
SMG6-220ENST00000576218 SMIM12Q96EX1 92 aa10.45□□□□□ -0.74
SMG6-220ENST00000576218 SAMD10Q9BYL1 202 aa10.45□□□□□ -0.74
SMG6-220ENST00000576218 SCRT2Q9NQ03 307 aa10.45□□□□□ -0.74
SMG6-220ENST00000576218 FRAS1Q86XX4 4008 aa10.44□□□□□ -0.74
SMG6-220ENST00000576218 MUC21A0A0G2JKD1 596 aa10.44□□□□□ -0.74
SMG6-220ENST00000576218 MUC21A0A140T8X8 626 aa10.44□□□□□ -0.74
SMG6-220ENST00000576218 XKRY2A2RUG3 117 aa10.44□□□□□ -0.74
SMG6-220ENST00000576218 P01737 135 aa10.44□□□□□ -0.74
SMG6-220ENST00000576218 CEBPGP53567 150 aa10.44□□□□□ -0.74
SMG6-220ENST00000576218 LINC00315P59091 139 aa10.44□□□□□ -0.74
SMG6-220ENST00000576218 RPS20P60866 119 aaKnown RBP10.44□□□□□ -0.74
SMG6-220ENST00000576218 ZNF56Q15929 161 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms