RNA–Protein interactions for RNA: ENST00000574095.1

NPLOC4-215, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-215ENST00000574095 STOML3Q8TAV4 291 aa17.69■□□□□ 0.42
NPLOC4-215ENST00000574095 PCLOQ9Y6V0 5065 aa17.69■□□□□ 0.42
NPLOC4-215ENST00000574095 CIDEAO60543 219 aa17.68■□□□□ 0.42
NPLOC4-215ENST00000574095 CRIP1P50238 77 aa17.68■□□□□ 0.42
NPLOC4-215ENST00000574095 CST9LP1Q5W188 147 aa17.68■□□□□ 0.42
NPLOC4-215ENST00000574095 SH2D6Q7Z4S9 175 aa17.68■□□□□ 0.42
NPLOC4-215ENST00000574095 ZC2HC1AQ96GY0 325 aa17.68■□□□□ 0.42
NPLOC4-215ENST00000574095 TRBV6-4A0A1B0GX49 114 aa17.67■□□□□ 0.42
NPLOC4-215ENST00000574095 HMSDA8MTL9 139 aa17.67■□□□□ 0.42
NPLOC4-215ENST00000574095 EVI2AP22794 236 aa17.67■□□□□ 0.42
NPLOC4-215ENST00000574095 PRADC1Q9BSG0 188 aa17.67■□□□□ 0.42
NPLOC4-215ENST00000574095 APOBP04114 4563 aaKnown RBP17.66■□□□□ 0.42
NPLOC4-215ENST00000574095 DNAH10OSP0CZ25 163 aa17.66■□□□□ 0.42
NPLOC4-215ENST00000574095 ASIPP42127 132 aa17.66■□□□□ 0.42
NPLOC4-215ENST00000574095 RHOHQ15669 191 aa17.66■□□□□ 0.42
NPLOC4-215ENST00000574095 B4DEV8 164 aa17.65■□□□□ 0.42
NPLOC4-215ENST00000574095 SEC11BP0C7V7 166 aa17.65■□□□□ 0.42
NPLOC4-215ENST00000574095 UBE2G1P62253 170 aa17.65■□□□□ 0.42
NPLOC4-215ENST00000574095 NFE4Q86UQ8 179 aa17.65■□□□□ 0.42
NPLOC4-215ENST00000574095 FMC1Q96HJ9 113 aa17.65■□□□□ 0.42
NPLOC4-215ENST00000574095 ZNF471Q9BX82 626 aaPredicted RBP17.65■□□□□ 0.42
NPLOC4-215ENST00000574095 ZFP30Q9Y2G7 519 aa17.65■□□□□ 0.42
NPLOC4-215ENST00000574095 A0A0D9SG52 128 aa17.64■□□□□ 0.41
NPLOC4-215ENST00000574095 M0R036 132 aa17.64■□□□□ 0.41
NPLOC4-215ENST00000574095 PAGE4O60829 102 aa17.64■□□□□ 0.41
NPLOC4-215ENST00000574095 SH2D1AO60880 128 aa17.64■□□□□ 0.41
NPLOC4-215ENST00000574095 LGALSLQ3ZCW2 172 aaPredicted RBP17.64■□□□□ 0.41
NPLOC4-215ENST00000574095 FAM213BQ8TBF2 198 aa17.64■□□□□ 0.41
NPLOC4-215ENST00000574095 SFT2D1Q8WV19 159 aa17.64■□□□□ 0.41
NPLOC4-215ENST00000574095 A0A1B0GV50 99 aa17.63■□□□□ 0.41
NPLOC4-215ENST00000574095 KANTRA0A1W2PQU2 76 aa17.63■□□□□ 0.41
NPLOC4-215ENST00000574095 KRBOX1C9JBD0 128 aa17.63■□□□□ 0.41
NPLOC4-215ENST00000574095 CDK2AP2O75956 126 aa17.63■□□□□ 0.41
NPLOC4-215ENST00000574095 TIRAPP58753 221 aa17.63■□□□□ 0.41
NPLOC4-215ENST00000574095 COX8CQ7Z4L0 72 aa17.63■□□□□ 0.41
NPLOC4-215ENST00000574095 PARLQ9H300 379 aa17.63■□□□□ 0.41
NPLOC4-215ENST00000574095 MSRB1Q9NZV6 116 aa17.63■□□□□ 0.41
NPLOC4-215ENST00000574095 H3BVH4 76 aa17.62■□□□□ 0.41
NPLOC4-215ENST00000574095 K7EP13 123 aa17.62■□□□□ 0.41
NPLOC4-215ENST00000574095 BCL2L11O43521 198 aa17.62■□□□□ 0.41
NPLOC4-215ENST00000574095 CRYGDP07320 174 aa17.62■□□□□ 0.41
NPLOC4-215ENST00000574095 MGST1P10620 155 aaKnown RBP17.62■□□□□ 0.41
NPLOC4-215ENST00000574095 Q6ZSN1 163 aa17.62■□□□□ 0.41
NPLOC4-215ENST00000574095 MBD3L1Q8WWY6 194 aa17.62■□□□□ 0.41
NPLOC4-215ENST00000574095 JPT2Q9H910 190 aa17.62■□□□□ 0.41
NPLOC4-215ENST00000574095 IL36BQ9NZH7 164 aa17.62■□□□□ 0.41
NPLOC4-215ENST00000574095 GRIFINA4D1Z8 144 aa17.61■□□□□ 0.41
NPLOC4-215ENST00000574095 A8MWV9 139 aa17.61■□□□□ 0.41
NPLOC4-215ENST00000574095 UMAD1C9J7I0 102 aa17.61■□□□□ 0.41
NPLOC4-215ENST00000574095 FAM162BQ5T6X4 162 aa17.61■□□□□ 0.41
NPLOC4-215ENST00000574095 TCEAL7Q9BRU2 100 aa17.61■□□□□ 0.41
NPLOC4-215ENST00000574095 IGHV3-38A0A0C4DH36 116 aa17.6■□□□□ 0.41
NPLOC4-215ENST00000574095 TRBV6-1A0A0K0K1D8 114 aa17.6■□□□□ 0.41
NPLOC4-215ENST00000574095 ARMS2P0C7Q2 107 aa17.6■□□□□ 0.41
NPLOC4-215ENST00000574095 FUSP35637 526 aaKnown RBP eCLIP17.6■□□□□ 0.41
NPLOC4-215ENST00000574095 AKR1C3P42330 323 aa17.6■□□□□ 0.41
NPLOC4-215ENST00000574095 ERVFC1-1P60608 527 aa17.6■□□□□ 0.41
NPLOC4-215ENST00000574095 DMRTA1Q5VZB9 504 aa17.6■□□□□ 0.41
NPLOC4-215ENST00000574095 KRTAP4-5Q9BYR2 181 aa17.6■□□□□ 0.41
NPLOC4-215ENST00000574095 LTAP01374 205 aa17.59■□□□□ 0.41
NPLOC4-215ENST00000574095 ZNF674Q2M3X9 581 aa17.59■□□□□ 0.41
NPLOC4-215ENST00000574095 OR10J3Q5JRS4 329 aa17.59■□□□□ 0.41
NPLOC4-215ENST00000574095 PIK3CD-AS1Q5SR53 167 aa17.59■□□□□ 0.41
NPLOC4-215ENST00000574095 DNLZQ5SXM8 178 aa17.59■□□□□ 0.41
NPLOC4-215ENST00000574095 ZFP2Q6ZN57 461 aa17.59■□□□□ 0.41
NPLOC4-215ENST00000574095 SAMD10Q9BYL1 202 aa17.59■□□□□ 0.41
NPLOC4-215ENST00000574095 TMSB15BA0A087X1C1 80 aa17.58■□□□□ 0.4
NPLOC4-215ENST00000574095 TRAV8-6A0A0B4J262 113 aa17.58■□□□□ 0.4
NPLOC4-215ENST00000574095 EREGO14944 169 aa17.58■□□□□ 0.4
NPLOC4-215ENST00000574095 C10orf126Q8N4M7 172 aa17.58■□□□□ 0.4
NPLOC4-215ENST00000574095 ATP6V0E2Q8NHE4 81 aa17.58■□□□□ 0.4
NPLOC4-215ENST00000574095 TMUB2Q71RG4 321 aa17.57■□□□□ 0.4
NPLOC4-215ENST00000574095 A0A087WTM6 91 aa17.56■□□□□ 0.4
NPLOC4-215ENST00000574095 PFDN1O60925 122 aa17.56■□□□□ 0.4
NPLOC4-215ENST00000574095 LINC01556Q5JQF7 62 aa17.56■□□□□ 0.4
NPLOC4-215ENST00000574095 LELP1Q5T871 98 aa17.56■□□□□ 0.4
NPLOC4-215ENST00000574095 GTSF1LQ9H1H1 148 aa17.56■□□□□ 0.4
NPLOC4-215ENST00000574095 SCO2A0A1W2PP80 73 aa17.55■□□□□ 0.4
NPLOC4-215ENST00000574095 GAGE12JA6NER3 117 aa17.55■□□□□ 0.4
NPLOC4-215ENST00000574095 H2AFB1P0C5Y9 115 aa17.55■□□□□ 0.4
NPLOC4-215ENST00000574095 EIF5AP63241 154 aaKnown RBP17.55■□□□□ 0.4
NPLOC4-215ENST00000574095 GAGE1Q13065 139 aa17.55■□□□□ 0.4
NPLOC4-215ENST00000574095 GAGE4Q13068 117 aa17.55■□□□□ 0.4
NPLOC4-215ENST00000574095 GAGE5Q13069 117 aa17.55■□□□□ 0.4
NPLOC4-215ENST00000574095 LINC01559Q495D7 138 aa17.55■□□□□ 0.4
NPLOC4-215ENST00000574095 GAGE13Q4V321 117 aa17.55■□□□□ 0.4
NPLOC4-215ENST00000574095 UFSP1Q6NVU6 142 aa17.55■□□□□ 0.4
NPLOC4-215ENST00000574095 MAPKAPK5-AS1Q8N8E1 139 aa17.55■□□□□ 0.4
NPLOC4-215ENST00000574095 SYT8Q8NBV8 401 aa17.55■□□□□ 0.4
NPLOC4-215ENST00000574095 PGPEP1Q9NXJ5 209 aa17.55■□□□□ 0.4
NPLOC4-215ENST00000574095 Q9UF83 564 aa17.55■□□□□ 0.4
NPLOC4-215ENST00000574095 C14orf178Q8N769 122 aaPredicted RBP17.54■□□□□ 0.4
NPLOC4-215ENST00000574095 PHLDA3Q9Y5J5 127 aa17.54■□□□□ 0.4
NPLOC4-215ENST00000574095 ABCA13Q86UQ4 5058 aa17.54■□□□□ 0.4
NPLOC4-215ENST00000574095 IGHV3-30P01768 117 aa17.53■□□□□ 0.4
NPLOC4-215ENST00000574095 IGHV3-33P01772 117 aa17.53■□□□□ 0.4
NPLOC4-215ENST00000574095 IGHV3-30-3P0DP02 117 aa17.53■□□□□ 0.4
NPLOC4-215ENST00000574095 IGHV3-30-5P0DP03 117 aa17.53■□□□□ 0.4
NPLOC4-215ENST00000574095 TPT1P13693 172 aaKnown RBP17.53■□□□□ 0.4
NPLOC4-215ENST00000574095 SCRT2Q9NQ03 307 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms