RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 LMO4P61968 165 aa13.21□□□□□ -0.29
SCARF1-205ENST00000571272 GAGE13Q4V321 117 aa13.21□□□□□ -0.29
SCARF1-205ENST00000571272 SFTA2Q6UW10 78 aa13.21□□□□□ -0.29
SCARF1-205ENST00000571272 SPOCK3Q9BQ16 436 aa13.21□□□□□ -0.29
SCARF1-205ENST00000571272 C20orf78Q9BR46 151 aa13.21□□□□□ -0.29
SCARF1-205ENST00000571272 LENEPQ9Y5L5 61 aa13.21□□□□□ -0.29
SCARF1-205ENST00000571272 COL12A1Q99715 3063 aa13.21□□□□□ -0.29
SCARF1-205ENST00000571272 RNF223E7ERA6 249 aa13.21□□□□□ -0.3
SCARF1-205ENST00000571272 EMP1P54849 157 aa13.21□□□□□ -0.3
SCARF1-205ENST00000571272 SPAG8Q99932 426 aaPredicted RBP13.2□□□□□ -0.3
SCARF1-205ENST00000571272 ZNF815PA8K554 130 aa13.2□□□□□ -0.3
SCARF1-205ENST00000571272 SCGB1D4Q6XE38 83 aa13.2□□□□□ -0.3
SCARF1-205ENST00000571272 BRD3OSQ6XYD6 125 aa13.2□□□□□ -0.3
SCARF1-205ENST00000571272 KLHL30-AS1Q8NEE0 82 aa13.2□□□□□ -0.3
SCARF1-205ENST00000571272 MUC4Q99102 2169 aa13.2□□□□□ -0.3
SCARF1-205ENST00000571272 GAGE12HA6NDE8 117 aa13.19□□□□□ -0.3
SCARF1-205ENST00000571272 HOXA3O43365 443 aaPredicted RBP13.19□□□□□ -0.3
SCARF1-205ENST00000571272 SLC25A16P16260 332 aa13.19□□□□□ -0.3
SCARF1-205ENST00000571272 PLEKHB2Q96CS7 222 aa13.19□□□□□ -0.3
SCARF1-205ENST00000571272 SIGMAR1Q99720 223 aa13.19□□□□□ -0.3
SCARF1-205ENST00000571272 DUSP14O95147 198 aaKnown RBP13.19□□□□□ -0.3
SCARF1-205ENST00000571272 INSL3P51460 131 aa13.19□□□□□ -0.3
SCARF1-205ENST00000571272 CD300EQ496F6 205 aaPredicted RBP13.19□□□□□ -0.3
SCARF1-205ENST00000571272 MORN3Q6PF18 240 aaPredicted RBP13.19□□□□□ -0.3
SCARF1-205ENST00000571272 PGPEP1Q9NXJ5 209 aa13.19□□□□□ -0.3
SCARF1-205ENST00000571272 SRD5A1P18405 259 aa13.18□□□□□ -0.3
SCARF1-205ENST00000571272 OVOL1O14753 267 aa13.18□□□□□ -0.3
SCARF1-205ENST00000571272 RNASE3P12724 160 aaKnown RBP13.18□□□□□ -0.3
SCARF1-205ENST00000571272 WFDC12Q8WWY7 111 aa13.18□□□□□ -0.3
SCARF1-205ENST00000571272 MOB4Q9Y3A3 225 aa13.18□□□□□ -0.3
SCARF1-205ENST00000571272 FAM223BA6NKX1 122 aa13.18□□□□□ -0.3
SCARF1-205ENST00000571272 SOCS3O14543 225 aa13.18□□□□□ -0.3
SCARF1-205ENST00000571272 KLRB1Q12918 225 aa13.18□□□□□ -0.3
SCARF1-205ENST00000571272 FAM223AQ8IWN6 122 aa13.18□□□□□ -0.3
SCARF1-205ENST00000571272 MRPL16Q9NX20 251 aaKnown RBP13.18□□□□□ -0.3
SCARF1-205ENST00000571272 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.17□□□□□ -0.33e-6■□□□□ 10.1
SCARF1-205ENST00000571272 A0A1B0GWB2 263 aa13.17□□□□□ -0.3
SCARF1-205ENST00000571272 J3QR89 54 aa13.17□□□□□ -0.3
SCARF1-205ENST00000571272 SRSF9Q13242 221 aaKnown RBP eCLIP13.17□□□□□ -0.3
SCARF1-205ENST00000571272 JPT2Q9H910 190 aa13.17□□□□□ -0.3
SCARF1-205ENST00000571272 PRO0461Q9UI25 63 aa13.17□□□□□ -0.3
SCARF1-205ENST00000571272 LY6EQ16553 131 aa13.17□□□□□ -0.3
SCARF1-205ENST00000571272 ABCA2Q9BZC7 2435 aa13.16□□□□□ -0.3
SCARF1-205ENST00000571272 LINC01549A6NIU2 74 aa13.16□□□□□ -0.3
SCARF1-205ENST00000571272 CRYGDP07320 174 aa13.15□□□□□ -0.3
SCARF1-205ENST00000571272 C19orf54Q5BKX5 351 aa13.15□□□□□ -0.3
SCARF1-205ENST00000571272 SPG11Q96JI7 2443 aa13.15□□□□□ -0.3
SCARF1-205ENST00000571272 NCOR2Q9Y618 2525 aa13.15□□□□□ -0.3
SCARF1-205ENST00000571272 LINC01619G3V211 115 aa13.15□□□□□ -0.3
SCARF1-205ENST00000571272 NDUFA4O00483 81 aa13.14□□□□□ -0.31
SCARF1-205ENST00000571272 TP53TG1Q9Y2A0 90 aa13.14□□□□□ -0.31
SCARF1-205ENST00000571272 C11orf86A6NJI1 115 aa13.14□□□□□ -0.31
SCARF1-205ENST00000571272 LOC107984156A0A0G2JMH3 177 aa13.14□□□□□ -0.31
SCARF1-205ENST00000571272 APOMO95445 188 aa13.14□□□□□ -0.31
SCARF1-205ENST00000571272 TSHBP01222 138 aa13.14□□□□□ -0.31
SCARF1-205ENST00000571272 RPL39P62891 51 aaKnown RBP13.14□□□□□ -0.31
SCARF1-205ENST00000571272 ARL17AQ8IVW1 177 aa13.14□□□□□ -0.31
SCARF1-205ENST00000571272 A0A087WWL8 130 aa13.13□□□□□ -0.31
SCARF1-205ENST00000571272 RHPN1-AS1Q9BWJ2 59 aa13.13□□□□□ -0.31
SCARF1-205ENST00000571272 PF4V1P10720 104 aa13.13□□□□□ -0.31
SCARF1-205ENST00000571272 COX6B1P14854 86 aa13.13□□□□□ -0.31
SCARF1-205ENST00000571272 EDN2P20800 178 aa13.12□□□□□ -0.31
SCARF1-205ENST00000571272 FAM19A4Q96LR4 140 aa13.12□□□□□ -0.31
SCARF1-205ENST00000571272 CHD8Q9HCK8 2581 aa13.12□□□□□ -0.31
SCARF1-205ENST00000571272 F5H697 171 aa13.12□□□□□ -0.31
SCARF1-205ENST00000571272 ZFP2Q6ZN57 461 aa13.12□□□□□ -0.31
SCARF1-205ENST00000571272 LINC00315P59091 139 aa13.11□□□□□ -0.31
SCARF1-205ENST00000571272 SORL1Q92673 2214 aa13.11□□□□□ -0.31
SCARF1-205ENST00000571272 IGLV4-69A0A075B6H9 119 aa13.11□□□□□ -0.31
SCARF1-205ENST00000571272 NDUFS8O00217 210 aa13.11□□□□□ -0.31
SCARF1-205ENST00000571272 PSMB2P49721 201 aa13.11□□□□□ -0.31
SCARF1-205ENST00000571272 ATP6V0BQ99437 205 aa13.11□□□□□ -0.31
SCARF1-205ENST00000571272 TMEM238LA0A1B0GVL6 79 aa13.1□□□□□ -0.31
SCARF1-205ENST00000571272 A6NJY4 79 aa13.1□□□□□ -0.31
SCARF1-205ENST00000571272 Q6ZS46 218 aa13.1□□□□□ -0.31
SCARF1-205ENST00000571272 KIF25-AS1Q9Y6Z4 181 aa13.1□□□□□ -0.31
SCARF1-205ENST00000571272 CSPG4Q6UVK1 2322 aa13.1□□□□□ -0.31
SCARF1-205ENST00000571272 TSPAN13O95857 204 aa13.1□□□□□ -0.31
SCARF1-205ENST00000571272 PPP1R17O96001 155 aa13.1□□□□□ -0.31
SCARF1-205ENST00000571272 MED14OSP0DP75 135 aa13.1□□□□□ -0.31
SCARF1-205ENST00000571272 BLCAPP62952 87 aa13.1□□□□□ -0.31
SCARF1-205ENST00000571272 SPATA25Q9BR10 227 aa13.1□□□□□ -0.31
SCARF1-205ENST00000571272 SPTBN4Q9H254 2564 aa13.1□□□□□ -0.31
SCARF1-205ENST00000571272 IGHV1-69DA0A0B4J2H0 117 aa13.1□□□□□ -0.31
SCARF1-205ENST00000571272 IGHV1-69P01742 117 aa13.1□□□□□ -0.31
SCARF1-205ENST00000571272 SUMO4Q6EEV6 95 aa13.1□□□□□ -0.31
SCARF1-205ENST00000571272 FAM159AQ6UWV7 190 aa13.1□□□□□ -0.31
SCARF1-205ENST00000571272 SMCPP49901 116 aaPredicted RBP13.09□□□□□ -0.31
SCARF1-205ENST00000571272 UBE2D1P51668 147 aa13.09□□□□□ -0.31
SCARF1-205ENST00000571272 ZNF418Q8TF45 676 aaPredicted RBP13.09□□□□□ -0.31
SCARF1-205ENST00000571272 IGIPA6NJ69 53 aa13.09□□□□□ -0.31
SCARF1-205ENST00000571272 TMEM170BQ5T4T1 132 aa13.09□□□□□ -0.31
SCARF1-205ENST00000571272 FAM74A4Q5TZK3 123 aa13.09□□□□□ -0.31
SCARF1-205ENST00000571272 DLX4Q92988 240 aaPredicted RBP13.09□□□□□ -0.31
SCARF1-205ENST00000571272 TRAV12-3A0A0B4J271 114 aa13.08□□□□□ -0.32
SCARF1-205ENST00000571272 CD7P09564 240 aa13.08□□□□□ -0.32
SCARF1-205ENST00000571272 IGHV4-38-2P0DP08 117 aa13.08□□□□□ -0.32
SCARF1-205ENST00000571272 CRIP2P52943 208 aaPredicted RBP13.08□□□□□ -0.32
SCARF1-205ENST00000571272 PMVKQ15126 192 aa13.08□□□□□ -0.32
SCARF1-205ENST00000571272 APRG1Q8IVJ8 170 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms