RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 NDUFA11Q86Y39 141 aa5.24□□□□□ -1.57
SMG1-215ENST00000568239 KRTAP3-3Q9BYR6 98 aa5.24□□□□□ -1.57
SMG1-215ENST00000568239 KRTAP3-2Q9BYR7 98 aa5.24□□□□□ -1.57
SMG1-215ENST00000568239 NIT2Q9NQR4 276 aa5.24□□□□□ -1.57
SMG1-215ENST00000568239 H3BMM0 161 aa5.24□□□□□ -1.57
SMG1-215ENST00000568239 HLA-DRB4P13762 266 aa5.24□□□□□ -1.57
SMG1-215ENST00000568239 ZNF493Q6ZR52 646 aa5.24□□□□□ -1.57
SMG1-215ENST00000568239 NIT1Q86X76 327 aa5.24□□□□□ -1.57
SMG1-215ENST00000568239 KCNS1Q96KK3 526 aa5.24□□□□□ -1.57
SMG1-215ENST00000568239 ZNF256Q9Y2P7 627 aaPredicted RBP5.24□□□□□ -1.57
SMG1-215ENST00000568239 HLA-DRB4X5D2U9 266 aa5.24□□□□□ -1.57
SMG1-215ENST00000568239 TRAV2A0A0B4J234 112 aa5.23□□□□□ -1.57
SMG1-215ENST00000568239 OR11H12B2RN74 326 aa5.23□□□□□ -1.57
SMG1-215ENST00000568239 OR5AL1P0C617 328 aa5.23□□□□□ -1.57
SMG1-215ENST00000568239 PMCHL1Q16048 86 aa5.23□□□□□ -1.57
SMG1-215ENST00000568239 MRPL51Q4U2R6 128 aaKnown RBP5.23□□□□□ -1.57
SMG1-215ENST00000568239 ORMDL3Q8N138 153 aa5.23□□□□□ -1.57
SMG1-215ENST00000568239 TMEM191AQ9H0A3 160 aa5.23□□□□□ -1.57
SMG1-215ENST00000568239 MUC4Q99102 2169 aa5.23□□□□□ -1.57
SMG1-215ENST00000568239 TRAV25A0A0B4J276 109 aa5.23□□□□□ -1.57
SMG1-215ENST00000568239 ZNF324O75467 553 aaPredicted RBP5.23□□□□□ -1.57
SMG1-215ENST00000568239 ODF3L2Q3SX64 289 aa5.23□□□□□ -1.57
SMG1-215ENST00000568239 CDPF1Q6NVV7 123 aa5.23□□□□□ -1.57
SMG1-215ENST00000568239 STHQ8IWL8 128 aa5.23□□□□□ -1.57
SMG1-215ENST00000568239 PRSS3P2Q8NHM4 247 aa5.23□□□□□ -1.57
SMG1-215ENST00000568239 PRELID3AQ96N28 172 aa5.23□□□□□ -1.57
SMG1-215ENST00000568239 ODF3Q96PU9 254 aa5.23□□□□□ -1.57
SMG1-215ENST00000568239 CNFNQ9BYD5 112 aa5.23□□□□□ -1.57
SMG1-215ENST00000568239 CIDEAO60543 219 aa5.22□□□□□ -1.57
SMG1-215ENST00000568239 SCGB1D1O95968 90 aa5.22□□□□□ -1.57
SMG1-215ENST00000568239 CACNG7P62955 275 aa5.22□□□□□ -1.57
SMG1-215ENST00000568239 AMTNQ6UX39 209 aa5.22□□□□□ -1.57
SMG1-215ENST00000568239 SIGLEC8Q9NYZ4 499 aa5.22□□□□□ -1.57
SMG1-215ENST00000568239 TRAV26-2A0A0B4J265 109 aa5.22□□□□□ -1.57
SMG1-215ENST00000568239 A4D1N5 150 aa5.22□□□□□ -1.57
SMG1-215ENST00000568239 RBMY1BA6NDE4 496 aaKnown RBP5.22□□□□□ -1.57
SMG1-215ENST00000568239 RBMY1EA6NEQ0 496 aaKnown RBP5.22□□□□□ -1.57
SMG1-215ENST00000568239 CBY3A6NI87 242 aa5.22□□□□□ -1.57
SMG1-215ENST00000568239 SNAI2O43623 268 aa5.22□□□□□ -1.57
SMG1-215ENST00000568239 RBMY1DP0C7P1 496 aaKnown RBP5.22□□□□□ -1.57
SMG1-215ENST00000568239 LINC00614P0C842 121 aa5.22□□□□□ -1.57
SMG1-215ENST00000568239 RNASE3P12724 160 aaKnown RBP5.22□□□□□ -1.57
SMG1-215ENST00000568239 RAB4AP20338 218 aa5.22□□□□□ -1.57
SMG1-215ENST00000568239 Q8N1Y9 231 aa5.22□□□□□ -1.57
SMG1-215ENST00000568239 C14orf178Q8N769 122 aaPredicted RBP5.22□□□□□ -1.57
SMG1-215ENST00000568239 GATD1Q8NB37 220 aa5.22□□□□□ -1.57
SMG1-215ENST00000568239 SPXQ9BT56 116 aa5.22□□□□□ -1.57
SMG1-215ENST00000568239 VWFP04275 2813 aa5.22□□□□□ -1.57
SMG1-215ENST00000568239 IGHV3OR16-12A0A075B7B8 117 aa5.22□□□□□ -1.57
SMG1-215ENST00000568239 IGHV1OR15-1A0A075B7D0 117 aa5.22□□□□□ -1.57
SMG1-215ENST00000568239 ESDP10768 282 aa5.22□□□□□ -1.57
SMG1-215ENST00000568239 KRTDAPP60985 99 aa5.22□□□□□ -1.57
SMG1-215ENST00000568239 MDFICQ9P1T7 246 aa5.22□□□□□ -1.57
SMG1-215ENST00000568239 XCL2Q9UBD3 114 aa5.22□□□□□ -1.57
SMG1-215ENST00000568239 CYSRT1A8MQ03 144 aa5.21□□□□□ -1.58
SMG1-215ENST00000568239 GAS8-AS1O95177 125 aa5.21□□□□□ -1.58
SMG1-215ENST00000568239 PRM2P04554 102 aa5.21□□□□□ -1.58
SMG1-215ENST00000568239 MGPP08493 103 aa5.21□□□□□ -1.58
SMG1-215ENST00000568239 IFI27P40305 119 aaPredicted RBP5.21□□□□□ -1.58
SMG1-215ENST00000568239 Q6ZWC4 215 aa5.21□□□□□ -1.58
SMG1-215ENST00000568239 FA2HQ7L5A8 372 aa5.21□□□□□ -1.58
SMG1-215ENST00000568239 RNF185Q96GF1 192 aa5.21□□□□□ -1.58
SMG1-215ENST00000568239 URB1-AS1Q96HZ7 61 aa5.21□□□□□ -1.58
SMG1-215ENST00000568239 WFDC10AQ9H1F0 79 aa5.21□□□□□ -1.58
SMG1-215ENST00000568239 CRXO43186 299 aaPredicted RBP5.21□□□□□ -1.58
SMG1-215ENST00000568239 NPYP01303 97 aa5.21□□□□□ -1.58
SMG1-215ENST00000568239 IGLV1-51P01701 117 aa5.21□□□□□ -1.58
SMG1-215ENST00000568239 RBMY1A1P0DJD3 496 aaKnown RBP5.21□□□□□ -1.58
SMG1-215ENST00000568239 RBMY1CP0DJD4 496 aa5.21□□□□□ -1.58
SMG1-215ENST00000568239 GATA1P15976 413 aaPredicted RBP5.21□□□□□ -1.58
SMG1-215ENST00000568239 RBMY1FQ15415 496 aaKnown RBP5.21□□□□□ -1.58
SMG1-215ENST00000568239 TMEM208Q9BTX3 173 aa5.21□□□□□ -1.58
SMG1-215ENST00000568239 CBY1Q9Y3M2 126 aa5.21□□□□□ -1.58
SMG1-215ENST00000568239 SMIM17P0DL12 118 aa5.2□□□□□ -1.58
SMG1-215ENST00000568239 JOSD1Q15040 202 aaPredicted RBP5.2□□□□□ -1.58
SMG1-215ENST00000568239 LINC01587Q99440 93 aa5.2□□□□□ -1.58
SMG1-215ENST00000568239 AP5S1Q9NUS5 200 aa5.2□□□□□ -1.58
SMG1-215ENST00000568239 IGHV4-4A0A075B6R2 117 aa5.2□□□□□ -1.58
SMG1-215ENST00000568239 TDRG1Q3Y452 100 aa5.2□□□□□ -1.58
SMG1-215ENST00000568239 FAM74A4Q5TZK3 123 aa5.2□□□□□ -1.58
SMG1-215ENST00000568239 LINC00482Q8N8I6 264 aa5.2□□□□□ -1.58
SMG1-215ENST00000568239 AP1S3Q96PC3 154 aa5.2□□□□□ -1.58
SMG1-215ENST00000568239 JPT2Q9H910 190 aa5.2□□□□□ -1.58
SMG1-215ENST00000568239 A0A087WWL8 130 aa5.19□□□□□ -1.58
SMG1-215ENST00000568239 IGHV3-16A0A0C4DH30 117 aa5.19□□□□□ -1.58
SMG1-215ENST00000568239 F5H697 171 aa5.19□□□□□ -1.58
SMG1-215ENST00000568239 PPBPP02775 128 aa5.19□□□□□ -1.58
SMG1-215ENST00000568239 RPL35AP18077 110 aaKnown RBP5.19□□□□□ -1.58
SMG1-215ENST00000568239 NUTF2P61970 127 aaKnown RBP5.19□□□□□ -1.58
SMG1-215ENST00000568239 SPATA3Q8NHX4 192 aa5.19□□□□□ -1.58
SMG1-215ENST00000568239 CHCHD1Q96BP2 118 aaKnown RBP5.19□□□□□ -1.58
SMG1-215ENST00000568239 SCRT2Q9NQ03 307 aa5.19□□□□□ -1.58
SMG1-215ENST00000568239 NACAE9PAV3 2078 aa5.19□□□□□ -1.58
SMG1-215ENST00000568239 IGHV1-24A0A0C4DH33 117 aa5.19□□□□□ -1.58
SMG1-215ENST00000568239 TNFRSF6BO95407 300 aa5.19□□□□□ -1.58
SMG1-215ENST00000568239 INSP01308 110 aa5.19□□□□□ -1.58
SMG1-215ENST00000568239 MED14OSP0DP75 135 aa5.19□□□□□ -1.58
SMG1-215ENST00000568239 MAP1LC3AQ9H492 121 aa5.19□□□□□ -1.58
SMG1-215ENST00000568239 DPH3P1Q9H4G8 78 aa5.19□□□□□ -1.58
SMG1-215ENST00000568239 U3KQK5 164 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms