RNA–Protein interactions for RNA: ENST00000560469.5

PBX1-218, Transcript of PBX homeobox 1, humanhuman

TSL 5

Gene PBX1, Length 1,674 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-218ENST00000560469 LINC00518Q8N0U6 118 aa16.58■□□□□ 0.24
PBX1-218ENST00000560469 ORMDL3Q8N138 153 aa16.58■□□□□ 0.24
PBX1-218ENST00000560469 RAB4AP20338 218 aa16.57■□□□□ 0.24
PBX1-218ENST00000560469 C20orf144Q9BQM9 153 aa16.57■□□□□ 0.24
PBX1-218ENST00000560469 SMIM6P0DI80 62 aa16.56■□□□□ 0.24
PBX1-218ENST00000560469 RNF185Q96GF1 192 aa16.56■□□□□ 0.24
PBX1-218ENST00000560469 IGHV3-16A0A0C4DH30 117 aa16.56■□□□□ 0.24
PBX1-218ENST00000560469 D6R8Y8 96 aa16.56■□□□□ 0.24
PBX1-218ENST00000560469 PPBPP02775 128 aa16.56■□□□□ 0.24
PBX1-218ENST00000560469 C9orf66Q5T8R8 295 aa16.56■□□□□ 0.24
PBX1-218ENST00000560469 TRPT1Q86TN4 253 aaKnown RBP16.56■□□□□ 0.24
PBX1-218ENST00000560469 TRGV11A0A075B6L2 103 aa16.55■□□□□ 0.24
PBX1-218ENST00000560469 M0R381 172 aa16.55■□□□□ 0.24
PBX1-218ENST00000560469 NXPH4O95158 308 aa16.55■□□□□ 0.24
PBX1-218ENST00000560469 EVI2AP22794 236 aa16.55■□□□□ 0.24
PBX1-218ENST00000560469 CKS2P33552 79 aa16.55■□□□□ 0.24
PBX1-218ENST00000560469 Q8N1Y9 231 aa16.55■□□□□ 0.24
PBX1-218ENST00000560469 PRELID3AQ96N28 172 aa16.55■□□□□ 0.24
PBX1-218ENST00000560469 SAMD10Q9BYL1 202 aa16.55■□□□□ 0.24
PBX1-218ENST00000560469 NIT1Q86X76 327 aa16.54■□□□□ 0.24
PBX1-218ENST00000560469 C9orf85Q96MD7 179 aa16.54■□□□□ 0.24
PBX1-218ENST00000560469 INSP01308 110 aa16.53■□□□□ 0.24
PBX1-218ENST00000560469 RBMY1A1P0DJD3 496 aaKnown RBP16.53■□□□□ 0.24
PBX1-218ENST00000560469 RBMY1CP0DJD4 496 aa16.53■□□□□ 0.24
PBX1-218ENST00000560469 NUTF2P61970 127 aaKnown RBP16.53■□□□□ 0.24
PBX1-218ENST00000560469 RBMY1FQ15415 496 aaKnown RBP16.53■□□□□ 0.24
PBX1-218ENST00000560469 RNASEKQ6P5S7 137 aaKnown RBP16.53■□□□□ 0.24
PBX1-218ENST00000560469 CHCHD1Q96BP2 118 aaKnown RBP16.53■□□□□ 0.24
PBX1-218ENST00000560469 C19orf73Q9NVV2 129 aa16.53■□□□□ 0.24
PBX1-218ENST00000560469 LAMTOR2Q9Y2Q5 125 aa16.53■□□□□ 0.24
PBX1-218ENST00000560469 HSBP1O75506 76 aa16.52■□□□□ 0.23
PBX1-218ENST00000560469 LINC00467Q9BRT7 94 aa16.52■□□□□ 0.23
PBX1-218ENST00000560469 CBY3A6NI87 242 aa16.51■□□□□ 0.23
PBX1-218ENST00000560469 AP1S3Q96PC3 154 aa16.51■□□□□ 0.23
PBX1-218ENST00000560469 C12orf57Q99622 126 aa16.51■□□□□ 0.23
PBX1-218ENST00000560469 SPRY2O43597 315 aa16.5■□□□□ 0.23
PBX1-218ENST00000560469 LINC00614P0C842 121 aa16.5■□□□□ 0.23
PBX1-218ENST00000560469 AMTP48728 403 aa16.5■□□□□ 0.23
PBX1-218ENST00000560469 KRTAP24-1Q3LI83 254 aa16.5■□□□□ 0.23
PBX1-218ENST00000560469 DPH3P1Q9H4G8 78 aa16.5■□□□□ 0.23
PBX1-218ENST00000560469 MDFICQ9P1T7 246 aa16.5■□□□□ 0.23
PBX1-218ENST00000560469 SYT8Q8NBV8 401 aa16.5■□□□□ 0.23
PBX1-218ENST00000560469 URB1-AS1Q96HZ7 61 aa16.5■□□□□ 0.23
PBX1-218ENST00000560469 MCRIP2Q9BUT9 160 aaKnown RBP16.5■□□□□ 0.23
PBX1-218ENST00000560469 PMCHP20382 165 aa16.49■□□□□ 0.23
PBX1-218ENST00000560469 SMKR1H3BMG3 65 aa16.48■□□□□ 0.23
PBX1-218ENST00000560469 PYY3Q5JQD4 70 aa16.48■□□□□ 0.23
PBX1-218ENST00000560469 MRAP2Q96G30 205 aa16.48■□□□□ 0.23
PBX1-218ENST00000560469 NCR2O95944 276 aa16.47■□□□□ 0.23
PBX1-218ENST00000560469 PRSS3P2Q8NHM4 247 aa16.47■□□□□ 0.23
PBX1-218ENST00000560469 LINC01587Q99440 93 aa16.47■□□□□ 0.23
PBX1-218ENST00000560469 XCL2Q9UBD3 114 aa16.47■□□□□ 0.23
PBX1-218ENST00000560469 NPYP01303 97 aa16.46■□□□□ 0.23
PBX1-218ENST00000560469 C14orf178Q8N769 122 aaPredicted RBP16.46■□□□□ 0.23
PBX1-218ENST00000560469 ZNF747Q9BV97 191 aa16.46■□□□□ 0.23
PBX1-218ENST00000560469 WFDC9Q8NEX5 89 aa16.46■□□□□ 0.23
PBX1-218ENST00000560469 NIPBLQ6KC79 2804 aaeCLIP16.45■□□□□ 0.22
PBX1-218ENST00000560469 SMIM17P0DL12 118 aa16.45■□□□□ 0.22
PBX1-218ENST00000560469 JOSD1Q15040 202 aaPredicted RBP16.45■□□□□ 0.22
PBX1-218ENST00000560469 FA2HQ7L5A8 372 aa16.45■□□□□ 0.22
PBX1-218ENST00000560469 GTSCR1Q86UQ5 136 aa16.45■□□□□ 0.22
PBX1-218ENST00000560469 FAM19A2Q8N3H0 131 aa16.45■□□□□ 0.22
PBX1-218ENST00000560469 WFDC10AQ9H1F0 79 aa16.45■□□□□ 0.22
PBX1-218ENST00000560469 MAP1LC3AQ9H492 121 aa16.45■□□□□ 0.22
PBX1-218ENST00000560469 MUC4Q99102 2169 aa16.45■□□□□ 0.22
PBX1-218ENST00000560469 TNFRSF6BO95407 300 aa16.44■□□□□ 0.22
PBX1-218ENST00000560469 HTN1P15515 57 aa16.44■□□□□ 0.22
PBX1-218ENST00000560469 ZNF415Q09FC8 603 aa16.44■□□□□ 0.22
PBX1-218ENST00000560469 MORN3Q6PF18 240 aaPredicted RBP16.44■□□□□ 0.22
PBX1-218ENST00000560469 SPATA3Q8NHX4 192 aa16.44■□□□□ 0.22
PBX1-218ENST00000560469 JMJD1CQ15652 2540 aa16.44■□□□□ 0.22
PBX1-218ENST00000560469 TMEM208Q9BTX3 173 aa16.43■□□□□ 0.22
PBX1-218ENST00000560469 GSN-AS1Q9NRJ2 163 aa16.43■□□□□ 0.22
PBX1-218ENST00000560469 AP5S1Q9NUS5 200 aa16.43■□□□□ 0.22
PBX1-218ENST00000560469 LOC389332A0A1B0GUA5 103 aa16.43■□□□□ 0.22
PBX1-218ENST00000560469 IFI27P40305 119 aaPredicted RBP16.43■□□□□ 0.22
PBX1-218ENST00000560469 Q6ZWC4 215 aa16.43■□□□□ 0.22
PBX1-218ENST00000560469 POM121L12Q8N7R1 296 aa16.43■□□□□ 0.22
PBX1-218ENST00000560469 C1QTNF4Q9BXJ3 329 aa16.43■□□□□ 0.22
PBX1-218ENST00000560469 KIF25-AS1Q9Y6Z4 181 aa16.43■□□□□ 0.22
PBX1-218ENST00000560469 TEP1Q99973 2627 aaKnown RBP16.42■□□□□ 0.22
PBX1-218ENST00000560469 C1orf158Q8N1D5 194 aa16.42■□□□□ 0.22
PBX1-218ENST00000560469 GAS8-AS1O95177 125 aa16.41■□□□□ 0.22
PBX1-218ENST00000560469 MGPP08493 103 aa16.41■□□□□ 0.22
PBX1-218ENST00000560469 GATA1P15976 413 aaPredicted RBP16.4■□□□□ 0.22
PBX1-218ENST00000560469 ZNF876PQ49A33 203 aa16.4■□□□□ 0.22
PBX1-218ENST00000560469 NRACQ8N912 160 aa16.4■□□□□ 0.22
PBX1-218ENST00000560469 PTH2Q96A98 100 aa16.4■□□□□ 0.22
PBX1-218ENST00000560469 NXT2Q9NPJ8 142 aaKnown RBP16.4■□□□□ 0.22
PBX1-218ENST00000560469 TRAV26-2A0A0B4J265 109 aa16.4■□□□□ 0.22
PBX1-218ENST00000560469 IGHV1-24A0A0C4DH33 117 aa16.4■□□□□ 0.22
PBX1-218ENST00000560469 PRSS47A8MTI9 375 aa16.4■□□□□ 0.22
PBX1-218ENST00000560469 RPL35AP18077 110 aaKnown RBP16.4■□□□□ 0.22
PBX1-218ENST00000560469 PIK3CD-AS1Q5SR53 167 aa16.4■□□□□ 0.22
PBX1-218ENST00000560469 PRIMA1Q86XR5 153 aa16.4■□□□□ 0.22
PBX1-218ENST00000560469 DEFB125Q8N687 156 aa16.4■□□□□ 0.22
PBX1-218ENST00000560469 PPP1R17O96001 155 aa16.39■□□□□ 0.21
PBX1-218ENST00000560469 LINC00315P59091 139 aa16.39■□□□□ 0.21
PBX1-218ENST00000560469 C3orf56Q8N813 242 aa16.39■□□□□ 0.21
PBX1-218ENST00000560469 SPXQ9BT56 116 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms