RNA–Protein interactions for RNA: ENST00000556461.1

VTI1B-206, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-206ENST00000556461 FABP5P3A8MUU1 101 aa5.54□□□□□ -1.52
VTI1B-206ENST00000556461 UMAD1C9J7I0 102 aa5.54□□□□□ -1.52
VTI1B-206ENST00000556461 KRBOX1C9JBD0 128 aa5.54□□□□□ -1.52
VTI1B-206ENST00000556461 M0R036 132 aa5.54□□□□□ -1.52
VTI1B-206ENST00000556461 GATA1P15976 413 aaPredicted RBP5.54□□□□□ -1.52
VTI1B-206ENST00000556461 PPT1P50897 306 aa5.54□□□□□ -1.52
VTI1B-206ENST00000556461 SLAQ13239 276 aa5.54□□□□□ -1.52
VTI1B-206ENST00000556461 MRPL23Q16540 153 aaKnown RBP5.54□□□□□ -1.52
VTI1B-206ENST00000556461 SOHLH1Q5JUK2 328 aa5.54□□□□□ -1.52
VTI1B-206ENST00000556461 Q6ZSN1 163 aa5.54□□□□□ -1.52
VTI1B-206ENST00000556461 NEGR1Q7Z3B1 354 aa5.54□□□□□ -1.52
VTI1B-206ENST00000556461 COX8CQ7Z4L0 72 aa5.54□□□□□ -1.52
VTI1B-206ENST00000556461 TCTE3Q8IZS6 198 aa5.54□□□□□ -1.52
VTI1B-206ENST00000556461 NHLRC2Q8NBF2 726 aa5.54□□□□□ -1.52
VTI1B-206ENST00000556461 JPT2Q9H910 190 aa5.54□□□□□ -1.52
VTI1B-206ENST00000556461 hCG_2014768A0A024R1R8 64 aa5.53□□□□□ -1.52
VTI1B-206ENST00000556461 TMSB15BA0A087X1C1 80 aa5.53□□□□□ -1.52
VTI1B-206ENST00000556461 B4DEV8 164 aa5.53□□□□□ -1.52
VTI1B-206ENST00000556461 H3BVH4 76 aa5.53□□□□□ -1.52
VTI1B-206ENST00000556461 SIVA1O15304 175 aa5.53□□□□□ -1.52
VTI1B-206ENST00000556461 LTAP01374 205 aa5.53□□□□□ -1.52
VTI1B-206ENST00000556461 ORM1P02763 201 aa5.53□□□□□ -1.52
VTI1B-206ENST00000556461 H2AFB1P0C5Y9 115 aa5.53□□□□□ -1.52
VTI1B-206ENST00000556461 TPT1P13693 172 aaKnown RBP5.53□□□□□ -1.52
VTI1B-206ENST00000556461 SRIP30626 198 aa5.53□□□□□ -1.52
VTI1B-206ENST00000556461 AKR1C3P42330 323 aa5.53□□□□□ -1.52
VTI1B-206ENST00000556461 UBE2G1P62253 170 aa5.53□□□□□ -1.52
VTI1B-206ENST00000556461 WFDC10BQ8IUB3 73 aa5.53□□□□□ -1.52
VTI1B-206ENST00000556461 SLC25A29Q8N8R3 303 aa5.53□□□□□ -1.52
VTI1B-206ENST00000556461 PTH2Q96A98 100 aa5.53□□□□□ -1.52
VTI1B-206ENST00000556461 FMC1Q96HJ9 113 aa5.53□□□□□ -1.52
VTI1B-206ENST00000556461 SAMD10Q9BYL1 202 aa5.53□□□□□ -1.52
VTI1B-206ENST00000556461 Q9UF83 564 aa5.53□□□□□ -1.52
VTI1B-206ENST00000556461 ZFP30Q9Y2G7 519 aa5.53□□□□□ -1.52
VTI1B-206ENST00000556461 TNFRSF18Q9Y5U5 241 aa5.53□□□□□ -1.52
VTI1B-206ENST00000556461 C1QBP02746 253 aa5.52□□□□□ -1.53
VTI1B-206ENST00000556461 S100A4P26447 101 aaKnown RBP5.52□□□□□ -1.53
VTI1B-206ENST00000556461 ASIPP42127 132 aa5.52□□□□□ -1.53
VTI1B-206ENST00000556461 LINC00315P59091 139 aa5.52□□□□□ -1.53
VTI1B-206ENST00000556461 EIF5AP63241 154 aaKnown RBP5.52□□□□□ -1.53
VTI1B-206ENST00000556461 ZNF674Q2M3X9 581 aa5.52□□□□□ -1.53
VTI1B-206ENST00000556461 TTC32Q5I0X7 151 aa5.52□□□□□ -1.53
VTI1B-206ENST00000556461 FAM162BQ5T6X4 162 aa5.52□□□□□ -1.53
VTI1B-206ENST00000556461 Q6ZRN7 208 aaPredicted RBP5.52□□□□□ -1.53
VTI1B-206ENST00000556461 PCNPQ8WW12 178 aaKnown RBP5.52□□□□□ -1.53
VTI1B-206ENST00000556461 TCEAL7Q9BRU2 100 aa5.52□□□□□ -1.53
VTI1B-206ENST00000556461 PARLQ9H300 379 aa5.52□□□□□ -1.53
VTI1B-206ENST00000556461 A0A1W2PPQ1 181 aa5.51□□□□□ -1.53
VTI1B-206ENST00000556461 ARMS2P0C7Q2 107 aa5.51□□□□□ -1.53
VTI1B-206ENST00000556461 SULT1A2P50226 295 aa5.51□□□□□ -1.53
VTI1B-206ENST00000556461 RPL19P84098 196 aaKnown RBP5.51□□□□□ -1.53
VTI1B-206ENST00000556461 LINC01559Q495D7 138 aa5.51□□□□□ -1.53
VTI1B-206ENST00000556461 DNLZQ5SXM8 178 aa5.51□□□□□ -1.53
VTI1B-206ENST00000556461 UFSP1Q6NVU6 142 aa5.51□□□□□ -1.53
VTI1B-206ENST00000556461 DERL1Q9BUN8 251 aa5.51□□□□□ -1.53
VTI1B-206ENST00000556461 MLST8Q9BVC4 326 aa5.51□□□□□ -1.53
VTI1B-206ENST00000556461 SCRT2Q9NQ03 307 aa5.51□□□□□ -1.53
VTI1B-206ENST00000556461 IL36BQ9NZH7 164 aa5.51□□□□□ -1.53
VTI1B-206ENST00000556461 GNG13Q9P2W3 67 aa5.51□□□□□ -1.53
VTI1B-206ENST00000556461 DNAH8Q96JB1 4490 aa5.5□□□□□ -1.53
VTI1B-206ENST00000556461 TRAV1-1A0A0B4J248 108 aa5.5□□□□□ -1.53
VTI1B-206ENST00000556461 A0A1B0GVG6 124 aa5.5□□□□□ -1.53
VTI1B-206ENST00000556461 TRBV6-4A0A1B0GX49 114 aa5.5□□□□□ -1.53
VTI1B-206ENST00000556461 KRTAP10-2P60368 255 aa5.5□□□□□ -1.53
VTI1B-206ENST00000556461 BAGE2Q86Y30 109 aa5.5□□□□□ -1.53
VTI1B-206ENST00000556461 C9orf62Q8N4C0 152 aa5.5□□□□□ -1.53
VTI1B-206ENST00000556461 C14orf178Q8N769 122 aaPredicted RBP5.5□□□□□ -1.53
VTI1B-206ENST00000556461 TXNDC17Q9BRA2 123 aa5.5□□□□□ -1.53
VTI1B-206ENST00000556461 ABCA13Q86UQ4 5058 aa5.49□□□□□ -1.53
VTI1B-206ENST00000556461 FAT1Q14517 4588 aa5.49□□□□□ -1.53
VTI1B-206ENST00000556461 A0A087WWL8 130 aa5.49□□□□□ -1.53
VTI1B-206ENST00000556461 GAGE12JA6NER3 117 aa5.49□□□□□ -1.53
VTI1B-206ENST00000556461 A8MWV9 139 aa5.49□□□□□ -1.53
VTI1B-206ENST00000556461 LINC00694P0DN24 101 aa5.49□□□□□ -1.53
VTI1B-206ENST00000556461 FUSP35637 526 aaKnown RBP eCLIP5.49□□□□□ -1.53
VTI1B-206ENST00000556461 RPL35P42766 123 aaKnown RBP5.49□□□□□ -1.53
VTI1B-206ENST00000556461 RAB5CP51148 216 aa5.49□□□□□ -1.53
VTI1B-206ENST00000556461 GAGE1Q13065 139 aa5.49□□□□□ -1.53
VTI1B-206ENST00000556461 GAGE4Q13068 117 aa5.49□□□□□ -1.53
VTI1B-206ENST00000556461 GAGE5Q13069 117 aa5.49□□□□□ -1.53
VTI1B-206ENST00000556461 RHOHQ15669 191 aa5.49□□□□□ -1.53
VTI1B-206ENST00000556461 GAGE13Q4V321 117 aa5.49□□□□□ -1.53
VTI1B-206ENST00000556461 AKAP14Q86UN6 197 aa5.49□□□□□ -1.53
VTI1B-206ENST00000556461 SLC51BQ86UW2 128 aa5.49□□□□□ -1.53
VTI1B-206ENST00000556461 C11orf52Q96A22 123 aa5.49□□□□□ -1.53
VTI1B-206ENST00000556461 PRADC1Q9BSG0 188 aa5.49□□□□□ -1.53
VTI1B-206ENST00000556461 KRTAP17-1Q9BYP8 105 aa5.49□□□□□ -1.53
VTI1B-206ENST00000556461 MANBALQ9NQG1 85 aa5.49□□□□□ -1.53
VTI1B-206ENST00000556461 PCLOQ9Y6V0 5065 aa5.49□□□□□ -1.53
VTI1B-206ENST00000556461 MUC21A0A0G2JKD1 596 aa5.48□□□□□ -1.53
VTI1B-206ENST00000556461 MUC21A0A140T8X8 626 aa5.48□□□□□ -1.53
VTI1B-206ENST00000556461 RAB19A4D1S5 217 aa5.48□□□□□ -1.53
VTI1B-206ENST00000556461 C16orf90A8MZG2 172 aa5.48□□□□□ -1.53
VTI1B-206ENST00000556461 M0R381 172 aa5.48□□□□□ -1.53
VTI1B-206ENST00000556461 CIDEAO60543 219 aa5.48□□□□□ -1.53
VTI1B-206ENST00000556461 IGLV2-8P01709 118 aa5.48□□□□□ -1.53
VTI1B-206ENST00000556461 S100A9P06702 114 aaKnown RBP5.48□□□□□ -1.53
VTI1B-206ENST00000556461 CRYGDP07320 174 aa5.48□□□□□ -1.53
VTI1B-206ENST00000556461 DNAH10OSP0CZ25 163 aa5.48□□□□□ -1.53
VTI1B-206ENST00000556461 MED14OSP0DP75 135 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms