RNA–Protein interactions for RNA: ENST00000555172.5

KTN1-220, Transcript of kinectin 1, humanhuman

TSL 2

Gene KTN1, Length 1,985 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-220ENST00000555172 GLI3P10071 1580 aa2.17□□□□□ -2.06
KTN1-220ENST00000555172 ANKRD36BQ8N2N9 1353 aa2.17□□□□□ -2.06
KTN1-220ENST00000555172 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.17□□□□□ -2.06
KTN1-220ENST00000555172 CPSF1Q10570 1443 aaKnown RBP2.17□□□□□ -2.06
KTN1-220ENST00000555172 DOCK1Q14185 1865 aa2.16□□□□□ -2.06
KTN1-220ENST00000555172 TRAV40A0A0B4J280 105 aa2.16□□□□□ -2.06
KTN1-220ENST00000555172 A0A0G2JQZ4 141 aa2.16□□□□□ -2.06
KTN1-220ENST00000555172 K7EP34 96 aa2.16□□□□□ -2.06
KTN1-220ENST00000555172 CBLN1P23435 193 aa2.16□□□□□ -2.06
KTN1-220ENST00000555172 FAUP35544 74 aaKnown RBP2.16□□□□□ -2.06
KTN1-220ENST00000555172 C9orf116Q5BN46 136 aaPredicted RBP2.16□□□□□ -2.06
KTN1-220ENST00000555172 C12orf73Q69YU5 71 aa2.16□□□□□ -2.06
KTN1-220ENST00000555172 PRO2289Q9P1D8 64 aa2.16□□□□□ -2.06
KTN1-220ENST00000555172 UNC13CQ8NB66 2214 aa2.16□□□□□ -2.06
KTN1-220ENST00000555172 MYO16Q9Y6X6 1858 aa2.16□□□□□ -2.06
KTN1-220ENST00000555172 A6NIN4 97 aa2.16□□□□□ -2.06
KTN1-220ENST00000555172 NUPR1O60356 82 aa2.16□□□□□ -2.06
KTN1-220ENST00000555172 RNASE2P10153 161 aaKnown RBP2.16□□□□□ -2.06
KTN1-220ENST00000555172 KRTAP10-8P60410 259 aa2.16□□□□□ -2.06
KTN1-220ENST00000555172 GNG11P61952 73 aa2.16□□□□□ -2.06
KTN1-220ENST00000555172 RPL7L1Q6DKI1 246 aaKnown RBP2.16□□□□□ -2.06
KTN1-220ENST00000555172 CSAG1Q6PB30 78 aa2.16□□□□□ -2.06
KTN1-220ENST00000555172 KRTAP26-1Q6PEX3 210 aa2.16□□□□□ -2.06
KTN1-220ENST00000555172 COMMD6Q7Z4G1 85 aa2.16□□□□□ -2.06
KTN1-220ENST00000555172 ANAPC11Q9NYG5 84 aa2.16□□□□□ -2.06
KTN1-220ENST00000555172 PSORS1C2Q9UIG4 136 aa2.16□□□□□ -2.06
KTN1-220ENST00000555172 GOLGA3Q08378 1498 aa2.15□□□□□ -2.06
KTN1-220ENST00000555172 MED12LQ86YW9 2145 aa2.15□□□□□ -2.06
KTN1-220ENST00000555172 LRP5O75197 1615 aa2.15□□□□□ -2.06
KTN1-220ENST00000555172 GPR179Q6PRD1 2367 aa2.15□□□□□ -2.06
KTN1-220ENST00000555172 COL11A1P12107 1806 aaPredicted RBP2.15□□□□□ -2.07
KTN1-220ENST00000555172 LRCOL1A6NCL2 159 aa2.15□□□□□ -2.07
KTN1-220ENST00000555172 RTL8CO15255 209 aa2.15□□□□□ -2.07
KTN1-220ENST00000555172 CYB5AP00167 134 aa2.15□□□□□ -2.07
KTN1-220ENST00000555172 POLR2JP52435 117 aaKnown RBP2.15□□□□□ -2.07
KTN1-220ENST00000555172 Q1T7F1 81 aa2.15□□□□□ -2.07
KTN1-220ENST00000555172 SLC48A1Q6P1K1 146 aa2.15□□□□□ -2.07
KTN1-220ENST00000555172 Q6ZTI0 123 aa2.15□□□□□ -2.07
KTN1-220ENST00000555172 CYSTM1Q9H1C7 97 aa2.15□□□□□ -2.07
KTN1-220ENST00000555172 SCAPERQ9BY12 1400 aa2.15□□□□□ -2.07
KTN1-220ENST00000555172 PARP14Q460N5 1801 aa2.15□□□□□ -2.07
KTN1-220ENST00000555172 HCG22E2RYF7 251 aa2.14□□□□□ -2.07
KTN1-220ENST00000555172 LY6EQ16553 131 aa2.14□□□□□ -2.07
KTN1-220ENST00000555172 LCE3EQ5T5B0 92 aa2.14□□□□□ -2.07
KTN1-220ENST00000555172 ZNF833PQ6ZTB9 187 aa2.14□□□□□ -2.07
KTN1-220ENST00000555172 LINC00167Q96N53 147 aa2.14□□□□□ -2.07
KTN1-220ENST00000555172 ADAMTS9Q9P2N4 1935 aa2.14□□□□□ -2.07
KTN1-220ENST00000555172 BAZ2BQ9UIF8 2168 aaKnown RBP2.14□□□□□ -2.07
KTN1-220ENST00000555172 ARAP2Q8WZ64 1704 aa2.14□□□□□ -2.07
KTN1-220ENST00000555172 DNMBPQ6XZF7 1577 aa2.14□□□□□ -2.07
KTN1-220ENST00000555172 ADGRL1O94910 1474 aa2.14□□□□□ -2.07
KTN1-220ENST00000555172 IGKV2D-24A0A075B6R9 120 aa2.14□□□□□ -2.07
KTN1-220ENST00000555172 TRAPPC2P0DI81 140 aa2.14□□□□□ -2.07
KTN1-220ENST00000555172 TRAPPC2BP0DI82 140 aa2.14□□□□□ -2.07
KTN1-220ENST00000555172 CNBPP62633 177 aaKnown RBP2.14□□□□□ -2.07
KTN1-220ENST00000555172 SEC11AP67812 179 aa2.14□□□□□ -2.07
KTN1-220ENST00000555172 TPRXLQ17RH7 258 aa2.14□□□□□ -2.07
KTN1-220ENST00000555172 LYPD5Q6UWN5 251 aa2.14□□□□□ -2.07
KTN1-220ENST00000555172 CMTM2Q8TAZ6 248 aa2.14□□□□□ -2.07
KTN1-220ENST00000555172 TIMM21Q9BVV7 248 aa2.14□□□□□ -2.07
KTN1-220ENST00000555172 ESPL1Q14674 2120 aa2.13□□□□□ -2.07
KTN1-220ENST00000555172 ABCA3Q99758 1704 aa2.13□□□□□ -2.07
KTN1-220ENST00000555172 FYCO1Q9BQS8 1478 aa2.13□□□□□ -2.07
KTN1-220ENST00000555172 A0A1W2PNU3 283 aaPredicted RBP2.13□□□□□ -2.07
KTN1-220ENST00000555172 F8W1H4 67 aa2.13□□□□□ -2.07
KTN1-220ENST00000555172 KRTAP13-3Q3SY46 172 aa2.13□□□□□ -2.07
KTN1-220ENST00000555172 KRTAP11-1Q8IUC1 163 aa2.13□□□□□ -2.07
KTN1-220ENST00000555172 IFI27L1Q96BM0 104 aa2.13□□□□□ -2.07
KTN1-220ENST00000555172 MRPL35Q9NZE8 188 aaKnown RBP2.13□□□□□ -2.07
KTN1-220ENST00000555172 MUC22E2RYF6 1773 aaPredicted RBP2.13□□□□□ -2.07
KTN1-220ENST00000555172 CXorf51AA0A1B0GTR3 108 aa2.12□□□□□ -2.07
KTN1-220ENST00000555172 SDHAF1A6NFY7 115 aa2.12□□□□□ -2.07
KTN1-220ENST00000555172 SFT2D2O95562 160 aa2.12□□□□□ -2.07
KTN1-220ENST00000555172 ASIPP42127 132 aa2.12□□□□□ -2.07
KTN1-220ENST00000555172 ATP5EP56381 51 aaPredicted RBP2.12□□□□□ -2.07
KTN1-220ENST00000555172 PDE6HQ13956 83 aa2.12□□□□□ -2.07
KTN1-220ENST00000555172 IGFBP7Q16270 282 aa2.12□□□□□ -2.07
KTN1-220ENST00000555172 C2orf82Q6UX34 121 aa2.12□□□□□ -2.07
KTN1-220ENST00000555172 SPACA4Q8TDM5 124 aa2.12□□□□□ -2.07
KTN1-220ENST00000555172 S100A16Q96FQ6 103 aaKnown RBP2.12□□□□□ -2.07
KTN1-220ENST00000555172 LIMD2Q9BT23 127 aa2.12□□□□□ -2.07
KTN1-220ENST00000555172 CYTL1Q9NRR1 136 aa2.12□□□□□ -2.07
KTN1-220ENST00000555172 FREM1Q5H8C1 2179 aa2.12□□□□□ -2.07
KTN1-220ENST00000555172 MPDZO75970 2070 aa2.12□□□□□ -2.07
KTN1-220ENST00000555172 PTPRFP10586 1907 aa2.12□□□□□ -2.07
KTN1-220ENST00000555172 ANK1P16157 1881 aa2.12□□□□□ -2.07
KTN1-220ENST00000555172 RTEL1-TNFRSF6BF6WH68 1400 aa2.12□□□□□ -2.07
KTN1-220ENST00000555172 STRCQ7RTU9 1775 aa2.12□□□□□ -2.07
KTN1-220ENST00000555172 MYO18AQ92614 2054 aaKnown RBP2.12□□□□□ -2.07
KTN1-220ENST00000555172 TRAV13-2A0A0B4J235 113 aa2.12□□□□□ -2.07
KTN1-220ENST00000555172 IGLC7A0M8Q6 106 aa2.12□□□□□ -2.07
KTN1-220ENST00000555172 C1orf137Q5JT78 98 aa2.12□□□□□ -2.07
KTN1-220ENST00000555172 C6orf52Q5T4I8 152 aa2.12□□□□□ -2.07
KTN1-220ENST00000555172 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.12□□□□□ -2.07
KTN1-220ENST00000555172 SH2D6Q7Z4S9 175 aa2.12□□□□□ -2.07
KTN1-220ENST00000555172 ZNF431Q8TF32 576 aaPredicted RBP2.12□□□□□ -2.07
KTN1-220ENST00000555172 PPDPFLQ8WWR9 84 aa2.12□□□□□ -2.07
KTN1-220ENST00000555172 MED9Q9NWA0 146 aa2.12□□□□□ -2.07
KTN1-220ENST00000555172 PLXNA4Q9HCM2 1894 aa2.12□□□□□ -2.07
KTN1-220ENST00000555172 MAP3K1Q13233 1512 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms