RNA–Protein interactions for RNA: ENST00000550233.1

TMEM116-211, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 5

Gene TMEM116, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-211ENST00000550233 ZNF518AQ6AHZ1 1483 aa1.95□□□□□ -2.1
TMEM116-211ENST00000550233 MBD5Q9P267 1494 aa1.95□□□□□ -2.1
TMEM116-211ENST00000550233 TRAV23DV6A0A075B6W5 121 aa1.95□□□□□ -2.1
TMEM116-211ENST00000550233 F6UZH7 168 aa1.95□□□□□ -2.1
TMEM116-211ENST00000550233 AGPAT4-IT1Q9H0P7 198 aa1.95□□□□□ -2.1
TMEM116-211ENST00000550233 TNRC6BQ9UPQ9 1833 aaKnown RBP1.95□□□□□ -2.1
TMEM116-211ENST00000550233 CFTRP13569 1480 aa1.94□□□□□ -2.1
TMEM116-211ENST00000550233 ANK1P16157 1881 aa1.94□□□□□ -2.1
TMEM116-211ENST00000550233 TNRC6AQ8NDV7 1962 aaKnown RBP1.94□□□□□ -2.1
TMEM116-211ENST00000550233 DAPK1P53355 1430 aa1.94□□□□□ -2.1
TMEM116-211ENST00000550233 COL4A1P02462 1669 aa1.94□□□□□ -2.1
TMEM116-211ENST00000550233 PIGBOS1A0A0B4J2F0 54 aa1.94□□□□□ -2.1
TMEM116-211ENST00000550233 KLF7O75840 302 aaPredicted RBP1.94□□□□□ -2.1
TMEM116-211ENST00000550233 NDUFB6O95139 128 aa1.94□□□□□ -2.1
TMEM116-211ENST00000550233 IL5P05113 134 aa1.94□□□□□ -2.1
TMEM116-211ENST00000550233 IL7P13232 177 aa1.94□□□□□ -2.1
TMEM116-211ENST00000550233 TCEAL7Q9BRU2 100 aa1.94□□□□□ -2.1
TMEM116-211ENST00000550233 LIMD2Q9BT23 127 aa1.94□□□□□ -2.1
TMEM116-211ENST00000550233 TMEM242Q9NWH2 141 aa1.94□□□□□ -2.1
TMEM116-211ENST00000550233 MRPL35Q9NZE8 188 aaKnown RBP1.94□□□□□ -2.1
TMEM116-211ENST00000550233 CXorf51AA0A1B0GTR3 108 aa1.93□□□□□ -2.1
TMEM116-211ENST00000550233 CORTO00230 105 aa1.93□□□□□ -2.1
TMEM116-211ENST00000550233 PIRTP0C851 137 aa1.93□□□□□ -2.1
TMEM116-211ENST00000550233 KRTAP21-3Q3LHN1 58 aa1.93□□□□□ -2.1
TMEM116-211ENST00000550233 C10orf105Q8TEF2 133 aa1.93□□□□□ -2.1
TMEM116-211ENST00000550233 OBSCN-AS1Q96MR7 158 aa1.93□□□□□ -2.1
TMEM116-211ENST00000550233 SEC11CQ9BY50 192 aa1.93□□□□□ -2.1
TMEM116-211ENST00000550233 SCN3BQ9NY72 215 aa1.93□□□□□ -2.1
TMEM116-211ENST00000550233 SERP1Q9Y6X1 66 aa1.93□□□□□ -2.1
TMEM116-211ENST00000550233 PHLPP1O60346 1717 aa1.93□□□□□ -2.1
TMEM116-211ENST00000550233 MYH9P35579 1960 aaKnown RBP1.92□□□□□ -2.1
TMEM116-211ENST00000550233 SPEF2Q9C093 1822 aa1.92□□□□□ -2.1
TMEM116-211ENST00000550233 MYH7P12883 1935 aa1.92□□□□□ -2.1
TMEM116-211ENST00000550233 HIGD1CA8MV81 97 aa1.92□□□□□ -2.1
TMEM116-211ENST00000550233 SNCGO76070 127 aa1.92□□□□□ -2.1
TMEM116-211ENST00000550233 IGKCP01834 107 aa1.92□□□□□ -2.1
TMEM116-211ENST00000550233 GNG4P50150 75 aa1.92□□□□□ -2.1
TMEM116-211ENST00000550233 C12orf73Q69YU5 71 aa1.92□□□□□ -2.1
TMEM116-211ENST00000550233 TMEM141Q96I45 108 aa1.92□□□□□ -2.1
TMEM116-211ENST00000550233 NDUFA12Q9UI09 145 aa1.92□□□□□ -2.1
TMEM116-211ENST00000550233 CACNA1BQ00975 2339 aa1.92□□□□□ -2.1
TMEM116-211ENST00000550233 LRP5O75197 1615 aa1.91□□□□□ -2.1
TMEM116-211ENST00000550233 MCM3APO60318 1980 aa1.91□□□□□ -2.1
TMEM116-211ENST00000550233 A6NIN4 97 aa1.91□□□□□ -2.1
TMEM116-211ENST00000550233 TNFP01375 233 aa1.91□□□□□ -2.1
TMEM116-211ENST00000550233 SLC25A6P12236 298 aa1.91□□□□□ -2.1
TMEM116-211ENST00000550233 HIST1H1DP16402 221 aaKnown RBP1.91□□□□□ -2.1
TMEM116-211ENST00000550233 Q56UQ5 140 aa1.91□□□□□ -2.1
TMEM116-211ENST00000550233 Q6AWC8 147 aa1.91□□□□□ -2.1
TMEM116-211ENST00000550233 RPL7L1Q6DKI1 246 aaKnown RBP1.91□□□□□ -2.1
TMEM116-211ENST00000550233 ODF3Q96PU9 254 aa1.91□□□□□ -2.1
TMEM116-211ENST00000550233 EML5Q05BV3 1969 aa1.9□□□□□ -2.1
TMEM116-211ENST00000550233 KIAA0100Q14667 2235 aaKnown RBP1.9□□□□□ -2.1
TMEM116-211ENST00000550233 LOC100130705A0A1B0GUX0 176 aa1.9□□□□□ -2.11
TMEM116-211ENST00000550233 KRTAP12-3P60328 96 aa1.9□□□□□ -2.11
TMEM116-211ENST00000550233 RPL37AP61513 92 aaKnown RBP1.9□□□□□ -2.11
TMEM116-211ENST00000550233 SLC48A1Q6P1K1 146 aa1.9□□□□□ -2.11
TMEM116-211ENST00000550233 DEFB132Q7Z7B7 95 aa1.9□□□□□ -2.11
TMEM116-211ENST00000550233 AKAP11Q9UKA4 1901 aa1.89□□□□□ -2.11
TMEM116-211ENST00000550233 FOCADQ5VW36 1801 aa1.89□□□□□ -2.11
TMEM116-211ENST00000550233 A2ML1A8K2U0 1454 aa1.89□□□□□ -2.11
TMEM116-211ENST00000550233 KTN1Q86UP2 1357 aaKnown RBP1.89□□□□□ -2.11
TMEM116-211ENST00000550233 TEX49A0A1B0GTD5 131 aa1.89□□□□□ -2.11
TMEM116-211ENST00000550233 MCRIP1C9JLW8 97 aa1.89□□□□□ -2.11
TMEM116-211ENST00000550233 APOC4-APOC2K7ER74 178 aa1.89□□□□□ -2.11
TMEM116-211ENST00000550233 APOC2P02655 101 aa1.89□□□□□ -2.11
TMEM116-211ENST00000550233 CCKP06307 115 aa1.89□□□□□ -2.11
TMEM116-211ENST00000550233 TPPP2P59282 170 aa1.89□□□□□ -2.11
TMEM116-211ENST00000550233 IQCJQ1A5X6 159 aa1.89□□□□□ -2.11
TMEM116-211ENST00000550233 SBSPONQ8IVN8 264 aa1.89□□□□□ -2.11
TMEM116-211ENST00000550233 IER3IP1Q9Y5U9 82 aa1.89□□□□□ -2.11
TMEM116-211ENST00000550233 PTPRDP23468 1912 aa1.89□□□□□ -2.11
TMEM116-211ENST00000550233 TECTAO75443 2155 aa1.89□□□□□ -2.11
TMEM116-211ENST00000550233 KIF13AQ9H1H9 1805 aa1.89□□□□□ -2.11
TMEM116-211ENST00000550233 ASCC3Q8N3C0 2202 aaKnown RBP1.89□□□□□ -2.11
TMEM116-211ENST00000550233 ZGRF1Q86YA3 2104 aa1.88□□□□□ -2.11
TMEM116-211ENST00000550233 TRPM7Q96QT4 1865 aa1.88□□□□□ -2.11
TMEM116-211ENST00000550233 SNAPC5O75971 98 aa1.88□□□□□ -2.11
TMEM116-211ENST00000550233 IFNA17P01571 189 aa1.88□□□□□ -2.11
TMEM116-211ENST00000550233 CBLN1P23435 193 aa1.88□□□□□ -2.11
TMEM116-211ENST00000550233 RPRMQ9NS64 109 aa1.88□□□□□ -2.11
TMEM116-211ENST00000550233 SORL1Q92673 2214 aa1.88□□□□□ -2.11
TMEM116-211ENST00000550233 MED13Q9UHV7 2174 aa1.88□□□□□ -2.11
TMEM116-211ENST00000550233 C20orf202A1L168 122 aa1.87□□□□□ -2.11
TMEM116-211ENST00000550233 FXYD4P59646 89 aa1.87□□□□□ -2.11
TMEM116-211ENST00000550233 C9orf116Q5BN46 136 aaPredicted RBP1.87□□□□□ -2.11
TMEM116-211ENST00000550233 XAF1Q6GPH4 301 aa1.87□□□□□ -2.11
TMEM116-211ENST00000550233 PPP1R1CQ8WVI7 109 aa1.87□□□□□ -2.11
TMEM116-211ENST00000550233 CASZ1Q86V15 1759 aa1.87□□□□□ -2.11
TMEM116-211ENST00000550233 ANGP03950 147 aaKnown RBP1.86□□□□□ -2.11
TMEM116-211ENST00000550233 PPP3R1P63098 170 aa1.86□□□□□ -2.11
TMEM116-211ENST00000550233 C4orf33Q8N1A6 199 aa1.86□□□□□ -2.11
TMEM116-211ENST00000550233 TET1Q8NFU7 2136 aa1.86□□□□□ -2.11
TMEM116-211ENST00000550233 C12orf57Q99622 126 aa1.86□□□□□ -2.11
TMEM116-211ENST00000550233 CDK12Q9NYV4 1490 aaPredicted RBP1.86□□□□□ -2.11
TMEM116-211ENST00000550233 PRRC2BQ5JSZ5 2229 aaKnown RBP1.86□□□□□ -2.11
TMEM116-211ENST00000550233 SPAARA0A1B0GVQ0 90 aa1.85□□□□□ -2.11
TMEM116-211ENST00000550233 LCE1CQ5T751 118 aa1.85□□□□□ -2.11
TMEM116-211ENST00000550233 LCE1BQ5T7P3 118 aa1.85□□□□□ -2.11
TMEM116-211ENST00000550233 LINC00575Q6W349 94 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms