RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 H3BVH4 76 aa6.68□□□□□ -1.34
HDAC7-229ENST00000549883 ORM1P02763 201 aa6.68□□□□□ -1.34
HDAC7-229ENST00000549883 AKR1C3P42330 323 aa6.68□□□□□ -1.34
HDAC7-229ENST00000549883 SLAQ13239 276 aa6.68□□□□□ -1.34
HDAC7-229ENST00000549883 MRPL23Q16540 153 aaKnown RBP6.68□□□□□ -1.34
HDAC7-229ENST00000549883 COX8CQ7Z4L0 72 aa6.68□□□□□ -1.34
HDAC7-229ENST00000549883 WFDC10BQ8IUB3 73 aa6.68□□□□□ -1.34
HDAC7-229ENST00000549883 SLC25A29Q8N8R3 303 aa6.68□□□□□ -1.34
HDAC7-229ENST00000549883 FMC1Q96HJ9 113 aa6.68□□□□□ -1.34
HDAC7-229ENST00000549883 SAMD10Q9BYL1 202 aa6.68□□□□□ -1.34
HDAC7-229ENST00000549883 TRBV6-1A0A0K0K1D8 114 aa6.67□□□□□ -1.34
HDAC7-229ENST00000549883 B4DEV8 164 aa6.67□□□□□ -1.34
HDAC7-229ENST00000549883 SIVA1O15304 175 aa6.67□□□□□ -1.34
HDAC7-229ENST00000549883 C1QBP02746 253 aa6.67□□□□□ -1.34
HDAC7-229ENST00000549883 SRIP30626 198 aa6.67□□□□□ -1.34
HDAC7-229ENST00000549883 UBE2G1P62253 170 aa6.67□□□□□ -1.34
HDAC7-229ENST00000549883 RPL19P84098 196 aaKnown RBP6.67□□□□□ -1.34
HDAC7-229ENST00000549883 ZNF674Q2M3X9 581 aa6.67□□□□□ -1.34
HDAC7-229ENST00000549883 NEGR1Q7Z3B1 354 aa6.67□□□□□ -1.34
HDAC7-229ENST00000549883 DERL1Q9BUN8 251 aa6.67□□□□□ -1.34
HDAC7-229ENST00000549883 ZFP30Q9Y2G7 519 aa6.67□□□□□ -1.34
HDAC7-229ENST00000549883 HECTD4Q9Y4D8 3996 aa6.67□□□□□ -1.34
HDAC7-229ENST00000549883 PKHD1P08F94 4074 aa6.66□□□□□ -1.34
HDAC7-229ENST00000549883 PKD1P98161 4303 aa6.66□□□□□ -1.34
HDAC7-229ENST00000549883 ARMS2P0C7Q2 107 aa6.66□□□□□ -1.34
HDAC7-229ENST00000549883 ASIPP42127 132 aa6.66□□□□□ -1.34
HDAC7-229ENST00000549883 SULT1A2P50226 295 aa6.66□□□□□ -1.34
HDAC7-229ENST00000549883 LINC00315P59091 139 aa6.66□□□□□ -1.34
HDAC7-229ENST00000549883 EIF5AP63241 154 aaKnown RBP6.66□□□□□ -1.34
HDAC7-229ENST00000549883 SOHLH1Q5JUK2 328 aa6.66□□□□□ -1.34
HDAC7-229ENST00000549883 FAM162BQ5T6X4 162 aa6.66□□□□□ -1.34
HDAC7-229ENST00000549883 DMRTA1Q5VZB9 504 aa6.66□□□□□ -1.34
HDAC7-229ENST00000549883 C9orf62Q8N4C0 152 aa6.66□□□□□ -1.34
HDAC7-229ENST00000549883 PTH2Q96A98 100 aa6.66□□□□□ -1.34
HDAC7-229ENST00000549883 PARLQ9H300 379 aa6.66□□□□□ -1.34
HDAC7-229ENST00000549883 GNG13Q9P2W3 67 aa6.66□□□□□ -1.34
HDAC7-229ENST00000549883 TRAV1-1A0A0B4J248 108 aa6.65□□□□□ -1.34
HDAC7-229ENST00000549883 S100A4P26447 101 aaKnown RBP6.65□□□□□ -1.34
HDAC7-229ENST00000549883 LINC01559Q495D7 138 aa6.65□□□□□ -1.34
HDAC7-229ENST00000549883 DNLZQ5SXM8 178 aa6.65□□□□□ -1.34
HDAC7-229ENST00000549883 UFSP1Q6NVU6 142 aa6.65□□□□□ -1.34
HDAC7-229ENST00000549883 Q6ZRN7 208 aaPredicted RBP6.65□□□□□ -1.34
HDAC7-229ENST00000549883 AKAP14Q86UN6 197 aa6.65□□□□□ -1.34
HDAC7-229ENST00000549883 PCNPQ8WW12 178 aaKnown RBP6.65□□□□□ -1.34
HDAC7-229ENST00000549883 TCEAL7Q9BRU2 100 aa6.65□□□□□ -1.34
HDAC7-229ENST00000549883 MLST8Q9BVC4 326 aa6.65□□□□□ -1.34
HDAC7-229ENST00000549883 IL36BQ9NZH7 164 aa6.65□□□□□ -1.34
HDAC7-229ENST00000549883 MUC21A0A0G2JKD1 596 aa6.64□□□□□ -1.35
HDAC7-229ENST00000549883 MUC21A0A140T8X8 626 aa6.64□□□□□ -1.35
HDAC7-229ENST00000549883 RAB19A4D1S5 217 aa6.64□□□□□ -1.35
HDAC7-229ENST00000549883 FUSP35637 526 aaKnown RBP eCLIP6.64□□□□□ -1.35
HDAC7-229ENST00000549883 NKX2-5P52952 324 aaPredicted RBP6.64□□□□□ -1.35
HDAC7-229ENST00000549883 TTC32Q5I0X7 151 aa6.64□□□□□ -1.35
HDAC7-229ENST00000549883 BAGE2Q86Y30 109 aa6.64□□□□□ -1.35
HDAC7-229ENST00000549883 C14orf178Q8N769 122 aaPredicted RBP6.64□□□□□ -1.35
HDAC7-229ENST00000549883 KRTAP17-1Q9BYP8 105 aa6.64□□□□□ -1.35
HDAC7-229ENST00000549883 SCRT2Q9NQ03 307 aa6.64□□□□□ -1.35
HDAC7-229ENST00000549883 DYNC1H1Q14204 4646 aaKnown RBP6.64□□□□□ -1.35
HDAC7-229ENST00000549883 A0A087WWL8 130 aa6.63□□□□□ -1.35
HDAC7-229ENST00000549883 TRBV6-4A0A1B0GX49 114 aa6.63□□□□□ -1.35
HDAC7-229ENST00000549883 A0A1W2PPQ1 181 aa6.63□□□□□ -1.35
HDAC7-229ENST00000549883 IGLV2-8P01709 118 aa6.63□□□□□ -1.35
HDAC7-229ENST00000549883 RPL35P42766 123 aaKnown RBP6.63□□□□□ -1.35
HDAC7-229ENST00000549883 KRTAP10-2P60368 255 aa6.63□□□□□ -1.35
HDAC7-229ENST00000549883 PRR27Q6MZM9 219 aa6.63□□□□□ -1.35
HDAC7-229ENST00000549883 SLC51BQ86UW2 128 aa6.63□□□□□ -1.35
HDAC7-229ENST00000549883 Q8N3U1 123 aa6.63□□□□□ -1.35
HDAC7-229ENST00000549883 C11orf52Q96A22 123 aa6.63□□□□□ -1.35
HDAC7-229ENST00000549883 TXNDC17Q9BRA2 123 aa6.63□□□□□ -1.35
HDAC7-229ENST00000549883 BOLA1Q9Y3E2 137 aa6.63□□□□□ -1.35
HDAC7-229ENST00000549883 GAGE12JA6NER3 117 aa6.62□□□□□ -1.35
HDAC7-229ENST00000549883 A8MWV9 139 aa6.62□□□□□ -1.35
HDAC7-229ENST00000549883 M0R381 172 aa6.62□□□□□ -1.35
HDAC7-229ENST00000549883 CRYGDP07320 174 aa6.62□□□□□ -1.35
HDAC7-229ENST00000549883 LINC00694P0DN24 101 aa6.62□□□□□ -1.35
HDAC7-229ENST00000549883 RAB5CP51148 216 aa6.62□□□□□ -1.35
HDAC7-229ENST00000549883 GAGE1Q13065 139 aa6.62□□□□□ -1.35
HDAC7-229ENST00000549883 GAGE4Q13068 117 aa6.62□□□□□ -1.35
HDAC7-229ENST00000549883 GAGE5Q13069 117 aa6.62□□□□□ -1.35
HDAC7-229ENST00000549883 RHOHQ15669 191 aa6.62□□□□□ -1.35
HDAC7-229ENST00000549883 GAGE13Q4V321 117 aa6.62□□□□□ -1.35
HDAC7-229ENST00000549883 CENPWQ5EE01 88 aa6.62□□□□□ -1.35
HDAC7-229ENST00000549883 ALKAL2Q6UX46 152 aa6.62□□□□□ -1.35
HDAC7-229ENST00000549883 OR10AG1Q8NH19 301 aa6.62□□□□□ -1.35
HDAC7-229ENST00000549883 PRADC1Q9BSG0 188 aa6.62□□□□□ -1.35
HDAC7-229ENST00000549883 MANBALQ9NQG1 85 aa6.62□□□□□ -1.35
HDAC7-229ENST00000549883 KIAA1109Q2LD37 5005 aa6.62□□□□□ -1.35
HDAC7-229ENST00000549883 DNAH11Q96DT5 4516 aa6.61□□□□□ -1.35
HDAC7-229ENST00000549883 TRBV20OR9-2A0A075B6H5 130 aa6.61□□□□□ -1.35
HDAC7-229ENST00000549883 S100A9P06702 114 aaKnown RBP6.61□□□□□ -1.35
HDAC7-229ENST00000549883 DNAH10OSP0CZ25 163 aa6.61□□□□□ -1.35
HDAC7-229ENST00000549883 GZMBP10144 247 aa6.61□□□□□ -1.35
HDAC7-229ENST00000549883 MGST1P10620 155 aaKnown RBP6.61□□□□□ -1.35
HDAC7-229ENST00000549883 SSTP61278 116 aa6.61□□□□□ -1.35
HDAC7-229ENST00000549883 FAM74A4Q5TZK3 123 aa6.61□□□□□ -1.35
HDAC7-229ENST00000549883 EIF5AL1Q6IS14 154 aaKnown RBP6.61□□□□□ -1.35
HDAC7-229ENST00000549883 ZFP2Q6ZN57 461 aa6.61□□□□□ -1.35
HDAC7-229ENST00000549883 SFRP2Q96HF1 295 aa6.61□□□□□ -1.35
HDAC7-229ENST00000549883 PHLDA3Q9Y5J5 127 aa6.61□□□□□ -1.35
HDAC7-229ENST00000549883 LY96Q9Y6Y9 160 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms