RNA–Protein interactions for RNA: ENST00000545425.2

FOXA1-202, Transcript of forkhead box A1, humanhuman

TSL 2

Gene FOXA1, Length 1,806 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-202ENST00000545425 GATA1P15976 413 aaPredicted RBP17.61■□□□□ 0.41
FOXA1-202ENST00000545425 CDKN1BP46527 198 aa17.61■□□□□ 0.41
FOXA1-202ENST00000545425 UNQ9165/PRO28630Q6UXU0 137 aa17.61■□□□□ 0.41
FOXA1-202ENST00000545425 S100A4P26447 101 aaKnown RBP17.61■□□□□ 0.41
FOXA1-202ENST00000545425 TAL2Q16559 108 aa17.61■□□□□ 0.41
FOXA1-202ENST00000545425 BRD3OSQ6XYD6 125 aa17.61■□□□□ 0.41
FOXA1-202ENST00000545425 DAZ1Q9NQZ3 744 aaKnown RBP17.61■□□□□ 0.41
FOXA1-202ENST00000545425 MTORP42345 2549 aa17.6■□□□□ 0.41
FOXA1-202ENST00000545425 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP17.6■□□□□ 0.41
FOXA1-202ENST00000545425 H3BUX3 64 aa17.6■□□□□ 0.41
FOXA1-202ENST00000545425 ID1P41134 155 aa17.6■□□□□ 0.41
FOXA1-202ENST00000545425 RPL32P62910 135 aaKnown RBP17.6■□□□□ 0.41
FOXA1-202ENST00000545425 PRR9Q5T870 116 aa17.6■□□□□ 0.41
FOXA1-202ENST00000545425 POM121L12Q8N7R1 296 aa17.6■□□□□ 0.41
FOXA1-202ENST00000545425 NXPH4O95158 308 aa17.59■□□□□ 0.41
FOXA1-202ENST00000545425 ATP5J2P56134 94 aa17.59■□□□□ 0.41
FOXA1-202ENST00000545425 PCP2Q8IVA1 136 aa17.59■□□□□ 0.41
FOXA1-202ENST00000545425 PHLDA3Q9Y5J5 127 aa17.59■□□□□ 0.41
FOXA1-202ENST00000545425 MED13LQ71F56 2210 aa17.59■□□□□ 0.41
FOXA1-202ENST00000545425 TRAV8-6A0A0B4J262 113 aa17.58■□□□□ 0.41
FOXA1-202ENST00000545425 GAGE10A6NGK3 116 aa17.58■□□□□ 0.41
FOXA1-202ENST00000545425 PF4V1P10720 104 aa17.58■□□□□ 0.41
FOXA1-202ENST00000545425 SUMO2P61956 95 aaKnown RBP17.58■□□□□ 0.41
FOXA1-202ENST00000545425 IGHV3OR16-10A0A075B7F0 116 aa17.58■□□□□ 0.4
FOXA1-202ENST00000545425 CFHR3Q02985 330 aa17.58■□□□□ 0.4
FOXA1-202ENST00000545425 WFDC3Q8IUB2 231 aa17.58■□□□□ 0.4
FOXA1-202ENST00000545425 LINC00527Q9UJ94 153 aa17.58■□□□□ 0.4
FOXA1-202ENST00000545425 H7C1H1 209 aa17.57■□□□□ 0.4
FOXA1-202ENST00000545425 IGHV4-38-2P0DP08 117 aa17.57■□□□□ 0.4
FOXA1-202ENST00000545425 RNASE8Q8TDE3 154 aaKnown RBP17.57■□□□□ 0.4
FOXA1-202ENST00000545425 Q96MF0 132 aa17.57■□□□□ 0.4
FOXA1-202ENST00000545425 ODF3Q96PU9 254 aa17.57■□□□□ 0.4
FOXA1-202ENST00000545425 RHPN1-AS1Q9BWJ2 59 aa17.57■□□□□ 0.4
FOXA1-202ENST00000545425 FLNAP21333 2647 aaKnown RBP17.56■□□□□ 0.4
FOXA1-202ENST00000545425 B4DSR2 109 aa17.56■□□□□ 0.4
FOXA1-202ENST00000545425 LINC01619G3V211 115 aa17.56■□□□□ 0.4
FOXA1-202ENST00000545425 TRBV12-3P01733 135 aa17.56■□□□□ 0.4
FOXA1-202ENST00000545425 RBX1P62877 108 aa17.56■□□□□ 0.4
FOXA1-202ENST00000545425 ZC2HC1BQ5TFG8 222 aa17.56■□□□□ 0.4
FOXA1-202ENST00000545425 OR5A1Q8NGJ0 315 aa17.56■□□□□ 0.4
FOXA1-202ENST00000545425 TOMM6Q96B49 74 aa17.56■□□□□ 0.4
FOXA1-202ENST00000545425 ACANP16112 2415 aa17.56■□□□□ 0.4
FOXA1-202ENST00000545425 UFSP1Q6NVU6 142 aa17.56■□□□□ 0.4
FOXA1-202ENST00000545425 F8VRH5 84 aa17.55■□□□□ 0.4
FOXA1-202ENST00000545425 CST9LQ9H4G1 147 aa17.55■□□□□ 0.4
FOXA1-202ENST00000545425 SMIM13P0DJ93 91 aa17.54■□□□□ 0.4
FOXA1-202ENST00000545425 ANXA2RQ3ZCQ2 193 aa17.54■□□□□ 0.4
FOXA1-202ENST00000545425 CHAC1Q9BUX1 264 aa17.54■□□□□ 0.4
FOXA1-202ENST00000545425 KLLNB2CW77 178 aa17.54■□□□□ 0.4
FOXA1-202ENST00000545425 K7EP34 96 aa17.54■□□□□ 0.4
FOXA1-202ENST00000545425 LY6EQ16553 131 aa17.54■□□□□ 0.4
FOXA1-202ENST00000545425 TM2D2Q9BX73 214 aa17.54■□□□□ 0.4
FOXA1-202ENST00000545425 MRPL35Q9NZE8 188 aaKnown RBP17.54■□□□□ 0.4
FOXA1-202ENST00000545425 TRAV26-2A0A0B4J265 109 aa17.53■□□□□ 0.4
FOXA1-202ENST00000545425 RASL10AQ92737 203 aa17.53■□□□□ 0.4
FOXA1-202ENST00000545425 GAGE12BA1L429 117 aa17.52■□□□□ 0.4
FOXA1-202ENST00000545425 RIPPLY3P57055 190 aa17.52■□□□□ 0.4
FOXA1-202ENST00000545425 RPL11P62913 178 aaKnown RBP17.52■□□□□ 0.4
FOXA1-202ENST00000545425 TM4SF20Q53R12 229 aa17.52■□□□□ 0.4
FOXA1-202ENST00000545425 TRBV25-1A0A075B6N4 114 aa17.51■□□□□ 0.39
FOXA1-202ENST00000545425 IGHV4OR15-8A0A075B7B6 117 aa17.51■□□□□ 0.39
FOXA1-202ENST00000545425 A0A087WW49 117 aa17.51■□□□□ 0.39
FOXA1-202ENST00000545425 IGKV2D-26A0A0A0MRZ7 120 aa17.51■□□□□ 0.39
FOXA1-202ENST00000545425 K7ERU9 68 aa17.51■□□□□ 0.39
FOXA1-202ENST00000545425 TMEM160Q9NX00 188 aa17.51■□□□□ 0.39
FOXA1-202ENST00000545425 RNASE4P34096 147 aaKnown RBP17.51■□□□□ 0.39
FOXA1-202ENST00000545425 OCIAD2Q56VL3 154 aa17.51■□□□□ 0.39
FOXA1-202ENST00000545425 SCGB3A1Q96QR1 104 aa17.51■□□□□ 0.39
FOXA1-202ENST00000545425 KLK15Q9H2R5 256 aa17.51■□□□□ 0.39
FOXA1-202ENST00000545425 IGHV4-30-2A0A087WSY4 118 aa17.5■□□□□ 0.39
FOXA1-202ENST00000545425 IGHV3-11P01762 117 aa17.5■□□□□ 0.39
FOXA1-202ENST00000545425 GTSCR1Q86UQ5 136 aa17.5■□□□□ 0.39
FOXA1-202ENST00000545425 A0A1W2PPM0 123 aa17.49■□□□□ 0.39
FOXA1-202ENST00000545425 J3QLI3 93 aa17.49■□□□□ 0.39
FOXA1-202ENST00000545425 ZNF469Q96JG9 3925 aaPredicted RBP17.49■□□□□ 0.39
FOXA1-202ENST00000545425 H3BUT2 72 aa17.49■□□□□ 0.39
FOXA1-202ENST00000545425 RNASE3P12724 160 aaKnown RBP17.49■□□□□ 0.39
FOXA1-202ENST00000545425 VPS13CQ709C8 3753 aa17.48■□□□□ 0.39
FOXA1-202ENST00000545425 SETD2Q9BYW2 2564 aaPredicted RBP17.48■□□□□ 0.39
FOXA1-202ENST00000545425 FABP2P12104 132 aa17.48■□□□□ 0.39
FOXA1-202ENST00000545425 BLCAPP62952 87 aa17.48■□□□□ 0.39
FOXA1-202ENST00000545425 PAPPA-AS1Q5QFB9 102 aa17.48■□□□□ 0.39
FOXA1-202ENST00000545425 Q6ZQT7 251 aa17.48■□□□□ 0.39
FOXA1-202ENST00000545425 ERASQ7Z444 233 aa17.48■□□□□ 0.39
FOXA1-202ENST00000545425 CEND1Q8N111 149 aa17.48■□□□□ 0.39
FOXA1-202ENST00000545425 NEXN-AS1Q8NBZ9 246 aa17.48■□□□□ 0.39
FOXA1-202ENST00000545425 CHTOPQ9Y3Y2 248 aaKnown RBP17.48■□□□□ 0.39
FOXA1-202ENST00000545425 FAM159AQ6UWV7 190 aa17.47■□□□□ 0.39
FOXA1-202ENST00000545425 C14orf178Q8N769 122 aaPredicted RBP17.47■□□□□ 0.39
FOXA1-202ENST00000545425 GCSHP23434 173 aa17.47■□□□□ 0.39
FOXA1-202ENST00000545425 PSMB8P28062 276 aa17.47■□□□□ 0.39
FOXA1-202ENST00000545425 DCANP1Q8TF63 244 aa17.45■□□□□ 0.38
FOXA1-202ENST00000545425 KIF25-AS1Q9Y6Z4 181 aa17.45■□□□□ 0.38
FOXA1-202ENST00000545425 C2orf66Q6UXQ4 117 aa17.44■□□□□ 0.38
FOXA1-202ENST00000545425 JMJD8Q96S16 334 aa17.44■□□□□ 0.38
FOXA1-202ENST00000545425 SMR3AQ99954 134 aa17.44■□□□□ 0.38
FOXA1-202ENST00000545425 OR11H12B2RN74 326 aa17.44■□□□□ 0.38
FOXA1-202ENST00000545425 J3KRW8 73 aa17.44■□□□□ 0.38
FOXA1-202ENST00000545425 MGPP08493 103 aa17.44■□□□□ 0.38
FOXA1-202ENST00000545425 OR11H1Q8NG94 326 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 121.5 ms