RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-223ENST00000544669 RNF152Q8N8N0 203 aa9.81□□□□□ -0.84
CPSF7-223ENST00000544669 VPS25Q9BRG1 176 aa9.81□□□□□ -0.84
CPSF7-223ENST00000544669 GNRH2O43555 120 aa9.8□□□□□ -0.84
CPSF7-223ENST00000544669 SCGB2A2Q13296 93 aa9.8□□□□□ -0.84
CPSF7-223ENST00000544669 HIST1H4GQ99525 98 aa9.8□□□□□ -0.84
CPSF7-223ENST00000544669 TIMM17AQ99595 171 aa9.8□□□□□ -0.84
CPSF7-223ENST00000544669 KIF25-AS1Q9Y6Z4 181 aa9.8□□□□□ -0.84
CPSF7-223ENST00000544669 RAB37Q96AX2 223 aa9.79□□□□□ -0.84
CPSF7-223ENST00000544669 ATMQ13315 3056 aa9.79□□□□□ -0.84
CPSF7-223ENST00000544669 CD7P09564 240 aa9.79□□□□□ -0.84
CPSF7-223ENST00000544669 POLR2KP53803 58 aaKnown RBP9.79□□□□□ -0.84
CPSF7-223ENST00000544669 BAALCQ8WXS3 180 aa9.79□□□□□ -0.84
CPSF7-223ENST00000544669 FXYD2P54710 66 aa9.78□□□□□ -0.84
CPSF7-223ENST00000544669 TCTAP57738 103 aa9.78□□□□□ -0.84
CPSF7-223ENST00000544669 PMVKQ15126 192 aa9.78□□□□□ -0.84
CPSF7-223ENST00000544669 RNF151Q2KHN1 245 aa9.78□□□□□ -0.84
CPSF7-223ENST00000544669 CEP295Q9C0D2 2601 aa9.78□□□□□ -0.84
CPSF7-223ENST00000544669 TRGV11A0A075B6L2 103 aa9.77□□□□□ -0.84
CPSF7-223ENST00000544669 TRBV27A0A0K0K1C4 114 aa9.77□□□□□ -0.84
CPSF7-223ENST00000544669 PRSS29PA6NIE9 313 aa9.77□□□□□ -0.84
CPSF7-223ENST00000544669 F8W1H4 67 aa9.77□□□□□ -0.84
CPSF7-223ENST00000544669 RIPPLY3P57055 190 aa9.77□□□□□ -0.84
CPSF7-223ENST00000544669 RHOHQ15669 191 aa9.77□□□□□ -0.84
CPSF7-223ENST00000544669 Q6ZQT7 251 aa9.77□□□□□ -0.84
CPSF7-223ENST00000544669 RPL39LQ96EH5 51 aaKnown RBP9.77□□□□□ -0.84
CPSF7-223ENST00000544669 NHP2Q9NX24 153 aaKnown RBP9.77□□□□□ -0.84
CPSF7-223ENST00000544669 ZZEF1O43149 2961 aa9.77□□□□□ -0.84
CPSF7-223ENST00000544669 A0A0J9YX75 114 aa9.77□□□□□ -0.85
CPSF7-223ENST00000544669 F5H697 171 aa9.77□□□□□ -0.85
CPSF7-223ENST00000544669 F6UB75 175 aa9.77□□□□□ -0.85
CPSF7-223ENST00000544669 J3QR89 54 aa9.77□□□□□ -0.85
CPSF7-223ENST00000544669 K7EQG2 157 aa9.77□□□□□ -0.85
CPSF7-223ENST00000544669 LGALS1P09382 135 aaKnown RBP9.77□□□□□ -0.85
CPSF7-223ENST00000544669 LINC00315P59091 139 aa9.77□□□□□ -0.85
CPSF7-223ENST00000544669 TRPT1Q86TN4 253 aaKnown RBP9.77□□□□□ -0.85
CPSF7-223ENST00000544669 UBE2E2Q96LR5 201 aa9.77□□□□□ -0.85
CPSF7-223ENST00000544669 C9orf85Q96MD7 179 aa9.77□□□□□ -0.85
CPSF7-223ENST00000544669 SPTBN2O15020 2390 aa9.76□□□□□ -0.85
CPSF7-223ENST00000544669 WNK2Q9Y3S1 2297 aa9.76□□□□□ -0.85
CPSF7-223ENST00000544669 IGKV3-7A0A075B6H7 116 aa9.76□□□□□ -0.85
CPSF7-223ENST00000544669 TRAV2A0A0B4J234 112 aa9.76□□□□□ -0.85
CPSF7-223ENST00000544669 A0A1B0GWB2 263 aa9.76□□□□□ -0.85
CPSF7-223ENST00000544669 LYRM7Q5U5X0 104 aa9.76□□□□□ -0.85
CPSF7-223ENST00000544669 ZFP2Q6ZN57 461 aa9.76□□□□□ -0.85
CPSF7-223ENST00000544669 FOXI2Q6ZQN5 318 aa9.76□□□□□ -0.85
CPSF7-223ENST00000544669 NEGR1Q7Z3B1 354 aa9.76□□□□□ -0.85
CPSF7-223ENST00000544669 PHLDA1Q8WV24 401 aaPredicted RBP9.76□□□□□ -0.85
CPSF7-223ENST00000544669 JMJD8Q96S16 334 aa9.76□□□□□ -0.85
CPSF7-223ENST00000544669 DMXL2Q8TDJ6 3036 aa9.76□□□□□ -0.85
CPSF7-223ENST00000544669 IGHV1OR15-1A0A075B7D0 117 aa9.75□□□□□ -0.85
CPSF7-223ENST00000544669 C12orf74Q32Q52 190 aa9.75□□□□□ -0.85
CPSF7-223ENST00000544669 PIK3CD-AS1Q5SR53 167 aa9.75□□□□□ -0.85
CPSF7-223ENST00000544669 VPREB3Q9UKI3 123 aa9.75□□□□□ -0.85
CPSF7-223ENST00000544669 TRAV12-3A0A0B4J271 114 aa9.75□□□□□ -0.85
CPSF7-223ENST00000544669 IGHV3-16A0A0C4DH30 117 aa9.75□□□□□ -0.85
CPSF7-223ENST00000544669 IGIPA6NJ69 53 aa9.75□□□□□ -0.85
CPSF7-223ENST00000544669 IGLL5B9A064 214 aa9.75□□□□□ -0.85
CPSF7-223ENST00000544669 RNF223E7ERA6 249 aa9.75□□□□□ -0.85
CPSF7-223ENST00000544669 DEFB112Q30KQ8 113 aa9.75□□□□□ -0.85
CPSF7-223ENST00000544669 SUMO4Q6EEV6 95 aa9.75□□□□□ -0.85
CPSF7-223ENST00000544669 MAPKAPK5-AS1Q8N8E1 139 aa9.75□□□□□ -0.85
CPSF7-223ENST00000544669 ZNF479Q96JC4 524 aa9.75□□□□□ -0.85
CPSF7-223ENST00000544669 KALRNO60229 2985 aa9.74□□□□□ -0.85
CPSF7-223ENST00000544669 TRBV7-3A0A075B6L6 115 aa9.74□□□□□ -0.85
CPSF7-223ENST00000544669 SDHAF1A6NFY7 115 aa9.74□□□□□ -0.85
CPSF7-223ENST00000544669 G3V4G9 280 aa9.74□□□□□ -0.85
CPSF7-223ENST00000544669 HOXA3O43365 443 aaPredicted RBP9.74□□□□□ -0.85
CPSF7-223ENST00000544669 COTL1Q14019 142 aa9.74□□□□□ -0.85
CPSF7-223ENST00000544669 SCGB1D4Q6XE38 83 aa9.74□□□□□ -0.85
CPSF7-223ENST00000544669 TEX29Q8N6K0 151 aa9.74□□□□□ -0.85
CPSF7-223ENST00000544669 PRADC1Q9BSG0 188 aa9.74□□□□□ -0.85
CPSF7-223ENST00000544669 EDA2RQ9HAV5 297 aa9.74□□□□□ -0.85
CPSF7-223ENST00000544669 TP53TG1Q9Y2A0 90 aa9.74□□□□□ -0.85
CPSF7-223ENST00000544669 C11orf86A6NJI1 115 aa9.73□□□□□ -0.85
CPSF7-223ENST00000544669 IGHV4-59P01825 116 aa9.73□□□□□ -0.85
CPSF7-223ENST00000544669 NSUN5P1Q3KNT7 163 aa9.73□□□□□ -0.85
CPSF7-223ENST00000544669 Q6ZS46 218 aa9.73□□□□□ -0.85
CPSF7-223ENST00000544669 LAMA5O15230 3695 aa9.73□□□□□ -0.85
CPSF7-223ENST00000544669 ZNF815PA8K554 130 aa9.72□□□□□ -0.85
CPSF7-223ENST00000544669 AVPP01185 164 aa9.72□□□□□ -0.85
CPSF7-223ENST00000544669 CRYBA4P53673 196 aa9.72□□□□□ -0.85
CPSF7-223ENST00000544669 TTTY13Q9BZ97 58 aa9.72□□□□□ -0.85
CPSF7-223ENST00000544669 ZNF256Q9Y2P7 627 aaPredicted RBP9.72□□□□□ -0.85
CPSF7-223ENST00000544669 SMG1Q96Q15 3661 aaKnown RBP9.72□□□□□ -0.85
CPSF7-223ENST00000544669 ZNF688P0C7X2 276 aa9.72□□□□□ -0.85
CPSF7-223ENST00000544669 SRD5A1P18405 259 aa9.72□□□□□ -0.85
CPSF7-223ENST00000544669 SRSF9Q13242 221 aaKnown RBP eCLIP9.72□□□□□ -0.85
CPSF7-223ENST00000544669 RRN3P1Q2M238 152 aa9.72□□□□□ -0.85
CPSF7-223ENST00000544669 Q6YL49 198 aa9.72□□□□□ -0.85
CPSF7-223ENST00000544669 I3L3M4 83 aa9.71□□□□□ -0.85
CPSF7-223ENST00000544669 TGFAP01135 160 aa9.71□□□□□ -0.85
CPSF7-223ENST00000544669 COX6B1P14854 86 aa9.71□□□□□ -0.85
CPSF7-223ENST00000544669 PTH2Q96A98 100 aa9.71□□□□□ -0.85
CPSF7-223ENST00000544669 SPANXB1Q9NS25 103 aaPredicted RBP9.71□□□□□ -0.85
CPSF7-223ENST00000544669 PEMTQ9UBM1 199 aa9.71□□□□□ -0.85
CPSF7-223ENST00000544669 M0QY20 66 aa9.7□□□□□ -0.86
CPSF7-223ENST00000544669 DEFB1P60022 68 aa9.7□□□□□ -0.86
CPSF7-223ENST00000544669 ZNF56Q15929 161 aa9.7□□□□□ -0.86
CPSF7-223ENST00000544669 ZNF876PQ49A33 203 aa9.7□□□□□ -0.86
CPSF7-223ENST00000544669 LCNL1Q6ZST4 164 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms