RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-223ENST00000543658 NAT8BQ9UHF3 227 aa8.56□□□□□ -1.04
DDB1-223ENST00000543658 A0A087WWC5 75 aa8.55□□□□□ -1.04
DDB1-223ENST00000543658 TRGV1A0A0A0MS02 117 aa8.55□□□□□ -1.04
DDB1-223ENST00000543658 A0A0J9YWU9 116 aa8.55□□□□□ -1.04
DDB1-223ENST00000543658 FAM231BA6NCW3 169 aa8.55□□□□□ -1.04
DDB1-223ENST00000543658 LYRM9A8MSI8 78 aa8.55□□□□□ -1.04
DDB1-223ENST00000543658 HIGD1CA8MV81 97 aa8.55□□□□□ -1.04
DDB1-223ENST00000543658 F2Z2F3 143 aa8.55□□□□□ -1.04
DDB1-223ENST00000543658 OR5AL1P0C617 328 aa8.55□□□□□ -1.04
DDB1-223ENST00000543658 SPART-AS1P0CW21 52 aa8.55□□□□□ -1.04
DDB1-223ENST00000543658 RNASE3P12724 160 aaKnown RBP8.55□□□□□ -1.04
DDB1-223ENST00000543658 CACNG7P62955 275 aa8.55□□□□□ -1.04
DDB1-223ENST00000543658 DAZ2Q13117 558 aaKnown RBP8.55□□□□□ -1.04
DDB1-223ENST00000543658 PGLYRP4Q96LB8 373 aa8.55□□□□□ -1.04
DDB1-223ENST00000543658 C9orf85Q96MD7 179 aa8.55□□□□□ -1.04
DDB1-223ENST00000543658 MUC4Q99102 2169 aa8.55□□□□□ -1.04
DDB1-223ENST00000543658 CXorf65A6NEN9 183 aa8.54□□□□□ -1.04
DDB1-223ENST00000543658 M0R381 172 aa8.54□□□□□ -1.04
DDB1-223ENST00000543658 SNAI2O43623 268 aa8.54□□□□□ -1.04
DDB1-223ENST00000543658 IGLC6P0CF74 106 aa8.54□□□□□ -1.04
DDB1-223ENST00000543658 FAM222AQ5U5X8 452 aa8.54□□□□□ -1.04
DDB1-223ENST00000543658 LYZL1Q6UWQ5 148 aa8.54□□□□□ -1.04
DDB1-223ENST00000543658 IL17DQ8TAD2 202 aa8.54□□□□□ -1.04
DDB1-223ENST00000543658 MRPL16Q9NX20 251 aaKnown RBP8.54□□□□□ -1.04
DDB1-223ENST00000543658 U3KQK5 164 aa8.54□□□□□ -1.04
DDB1-223ENST00000543658 TRGV2A0A075B6R0 118 aa8.53□□□□□ -1.04
DDB1-223ENST00000543658 SMIM27A0A1W2PRY6 76 aa8.53□□□□□ -1.04
DDB1-223ENST00000543658 PLAC8L1A1L4L8 177 aa8.53□□□□□ -1.04
DDB1-223ENST00000543658 CTRLP40313 264 aa8.53□□□□□ -1.04
DDB1-223ENST00000543658 SSTP61278 116 aa8.53□□□□□ -1.04
DDB1-223ENST00000543658 DAD1P61803 113 aa8.53□□□□□ -1.04
DDB1-223ENST00000543658 LGALS9BQ3B8N2 356 aa8.53□□□□□ -1.04
DDB1-223ENST00000543658 ZNF876PQ49A33 203 aa8.53□□□□□ -1.04
DDB1-223ENST00000543658 TMEM242Q9NWH2 141 aa8.53□□□□□ -1.04
DDB1-223ENST00000543658 MUC21A0A0G2JKD1 596 aa8.52□□□□□ -1.05
DDB1-223ENST00000543658 MUC21A0A140T8X8 626 aa8.52□□□□□ -1.05
DDB1-223ENST00000543658 A0A1B0GUT8 65 aa8.52□□□□□ -1.05
DDB1-223ENST00000543658 GAGE12BA1L429 117 aa8.52□□□□□ -1.05
DDB1-223ENST00000543658 SPINK4O60575 86 aa8.52□□□□□ -1.05
DDB1-223ENST00000543658 GAGE7O76087 117 aa8.52□□□□□ -1.05
DDB1-223ENST00000543658 GAGE12FP0CL80 117 aa8.52□□□□□ -1.05
DDB1-223ENST00000543658 GAGE12GP0CL81 117 aa8.52□□□□□ -1.05
DDB1-223ENST00000543658 GAGE12IP0CL82 117 aa8.52□□□□□ -1.05
DDB1-223ENST00000543658 DEFB130BP0DP73 79 aa8.52□□□□□ -1.05
DDB1-223ENST00000543658 DEFB130AP0DP74 79 aa8.52□□□□□ -1.05
DDB1-223ENST00000543658 RIGQ13278 110 aa8.52□□□□□ -1.05
DDB1-223ENST00000543658 SMIM15Q7Z3B0 74 aa8.52□□□□□ -1.05
DDB1-223ENST00000543658 OR10AG1Q8NH19 301 aa8.52□□□□□ -1.05
DDB1-223ENST00000543658 GTSF1Q8WW33 167 aa8.52□□□□□ -1.05
DDB1-223ENST00000543658 IMMP2LQ96T52 175 aa8.52□□□□□ -1.05
DDB1-223ENST00000543658 NDUFAF3Q9BU61 184 aa8.52□□□□□ -1.05
DDB1-223ENST00000543658 SSBP4Q9BWG4 385 aaPredicted RBP8.52□□□□□ -1.05
DDB1-223ENST00000543658 SCRT2Q9NQ03 307 aa8.52□□□□□ -1.05
DDB1-223ENST00000543658 DKK2Q9UBU2 259 aa8.52□□□□□ -1.05
DDB1-223ENST00000543658 S100A8P05109 93 aa8.51□□□□□ -1.05
DDB1-223ENST00000543658 TRGC1P0CF51 173 aa8.51□□□□□ -1.05
DDB1-223ENST00000543658 SMIM17P0DL12 118 aa8.51□□□□□ -1.05
DDB1-223ENST00000543658 FOXA3P55318 350 aaPredicted RBP8.51□□□□□ -1.05
DDB1-223ENST00000543658 TWIST1Q15672 202 aa8.51□□□□□ -1.05
DDB1-223ENST00000543658 WDR73Q6P4I2 378 aa8.51□□□□□ -1.05
DDB1-223ENST00000543658 Q6ZTI0 123 aa8.51□□□□□ -1.05
DDB1-223ENST00000543658 NUP35Q8NFH5 326 aa8.51□□□□□ -1.05
DDB1-223ENST00000543658 C11orf45Q8TAV5 145 aa8.51□□□□□ -1.05
DDB1-223ENST00000543658 PTH2Q96A98 100 aa8.51□□□□□ -1.05
DDB1-223ENST00000543658 BTF3L4Q96K17 158 aa8.51□□□□□ -1.05
DDB1-223ENST00000543658 AP1S3Q96PC3 154 aa8.51□□□□□ -1.05
DDB1-223ENST00000543658 URGCP-MRPS24S4R325 110 aa8.51□□□□□ -1.05
DDB1-223ENST00000543658 A8MWV9 139 aa8.5□□□□□ -1.05
DDB1-223ENST00000543658 NTF3P20783 257 aa8.5□□□□□ -1.05
DDB1-223ENST00000543658 FAM3BP58499 235 aaPredicted RBP8.5□□□□□ -1.05
DDB1-223ENST00000543658 PIK3CD-AS1Q5SR53 167 aa8.5□□□□□ -1.05
DDB1-223ENST00000543658 RASL10AQ92737 203 aa8.5□□□□□ -1.05
DDB1-223ENST00000543658 CELA1Q9UNI1 258 aa8.5□□□□□ -1.05
DDB1-223ENST00000543658 NACAE9PAV3 2078 aa8.5□□□□□ -1.05
DDB1-223ENST00000543658 TRAV9-1A0A075B6T8 112 aa8.49□□□□□ -1.05
DDB1-223ENST00000543658 A0A1B0GW15 77 aa8.49□□□□□ -1.05
DDB1-223ENST00000543658 HBBP68871 147 aa8.49□□□□□ -1.05
DDB1-223ENST00000543658 MRPL54Q6P161 138 aaKnown RBP8.49□□□□□ -1.05
DDB1-223ENST00000543658 ATP5L2Q7Z4Y8 100 aa8.49□□□□□ -1.05
DDB1-223ENST00000543658 ZNF575Q86XF7 245 aa8.49□□□□□ -1.05
DDB1-223ENST00000543658 OR4C5Q8NGB2 326 aa8.49□□□□□ -1.05
DDB1-223ENST00000543658 CNFNQ9BYD5 112 aa8.49□□□□□ -1.05
DDB1-223ENST00000543658 SMCO4Q9NRQ5 59 aa8.49□□□□□ -1.05
DDB1-223ENST00000543658 NBEAL2Q6ZNJ1 2754 aa8.48□□□□□ -1.05
DDB1-223ENST00000543658 TRAV4A0A0B4J268 109 aa8.48□□□□□ -1.05
DDB1-223ENST00000543658 RHODO00212 210 aa8.48□□□□□ -1.05
DDB1-223ENST00000543658 NXPH4O95158 308 aa8.48□□□□□ -1.05
DDB1-223ENST00000543658 ATP5G1P05496 136 aa8.48□□□□□ -1.05
DDB1-223ENST00000543658 FAM74A4Q5TZK3 123 aa8.48□□□□□ -1.05
DDB1-223ENST00000543658 ATRAIDQ6UW56 229 aa8.48□□□□□ -1.05
DDB1-223ENST00000543658 MEGF8Q7Z7M0 2845 aa8.47□□□□□ -1.05
DDB1-223ENST00000543658 IGHV4-4A0A075B6R2 117 aa8.47□□□□□ -1.05
DDB1-223ENST00000543658 CIDEAO60543 219 aa8.47□□□□□ -1.05
DDB1-223ENST00000543658 IGHV3-53P01767 116 aa8.47□□□□□ -1.05
DDB1-223ENST00000543658 MGPP08493 103 aa8.47□□□□□ -1.05
DDB1-223ENST00000543658 HTN3P15516 51 aa8.47□□□□□ -1.05
DDB1-223ENST00000543658 CAMPP49913 170 aa8.47□□□□□ -1.05
DDB1-223ENST00000543658 RAB4BP61018 213 aa8.47□□□□□ -1.05
DDB1-223ENST00000543658 ZNF56Q15929 161 aa8.47□□□□□ -1.05
DDB1-223ENST00000543658 DPH3P1Q9H4G8 78 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms