RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 POM121L12Q8N7R1 296 aa4.93□□□□□ -1.62
PTPRO-208ENST00000542557 DCANP1Q8TF63 244 aa4.93□□□□□ -1.62
PTPRO-208ENST00000542557 ODF3Q96PU9 254 aa4.93□□□□□ -1.62
PTPRO-208ENST00000542557 USP9XQ93008 2570 aaPredicted RBP4.93□□□□□ -1.62
PTPRO-208ENST00000542557 SPTAN1Q13813 2472 aaKnown RBP4.93□□□□□ -1.62
PTPRO-208ENST00000542557 A1L4Q6 167 aa4.93□□□□□ -1.62
PTPRO-208ENST00000542557 CCL25O15444 150 aa4.93□□□□□ -1.62
PTPRO-208ENST00000542557 EIF4EBP3O60516 100 aaPredicted RBP4.93□□□□□ -1.62
PTPRO-208ENST00000542557 IGHV4-59P01825 116 aa4.93□□□□□ -1.62
PTPRO-208ENST00000542557 IGKCP01834 107 aa4.93□□□□□ -1.62
PTPRO-208ENST00000542557 WFDC3Q8IUB2 231 aa4.93□□□□□ -1.62
PTPRO-208ENST00000542557 AP1S3Q96PC3 154 aa4.93□□□□□ -1.62
PTPRO-208ENST00000542557 HHLA3Q9XRX5 114 aa4.93□□□□□ -1.62
PTPRO-208ENST00000542557 PHLDA3Q9Y5J5 127 aa4.93□□□□□ -1.62
PTPRO-208ENST00000542557 FLNCQ14315 2725 aa4.92□□□□□ -1.62
PTPRO-208ENST00000542557 F6UB75 175 aa4.92□□□□□ -1.62
PTPRO-208ENST00000542557 DPM2O94777 84 aa4.92□□□□□ -1.62
PTPRO-208ENST00000542557 PPP1R17O96001 155 aa4.92□□□□□ -1.62
PTPRO-208ENST00000542557 FSHBP01225 129 aa4.92□□□□□ -1.62
PTPRO-208ENST00000542557 PRSS1P07477 247 aa4.92□□□□□ -1.62
PTPRO-208ENST00000542557 RNASE4P34096 147 aaKnown RBP4.92□□□□□ -1.62
PTPRO-208ENST00000542557 ORMDL2Q53FV1 153 aa4.92□□□□□ -1.62
PTPRO-208ENST00000542557 MYOZ3Q8TDC0 251 aa4.92□□□□□ -1.62
PTPRO-208ENST00000542557 FOXC2Q99958 501 aa4.92□□□□□ -1.62
PTPRO-208ENST00000542557 CELSR1Q9NYQ6 3014 aa4.92□□□□□ -1.62
PTPRO-208ENST00000542557 RNASE3P12724 160 aaKnown RBP4.92□□□□□ -1.62
PTPRO-208ENST00000542557 DEFB1P60022 68 aa4.92□□□□□ -1.62
PTPRO-208ENST00000542557 SUMO2P61956 95 aaKnown RBP4.92□□□□□ -1.62
PTPRO-208ENST00000542557 ADAMTSL5Q6ZMM2 481 aa4.92□□□□□ -1.62
PTPRO-208ENST00000542557 RASL10AQ92737 203 aa4.92□□□□□ -1.62
PTPRO-208ENST00000542557 TRAV12-1A0A0B4J245 112 aa4.91□□□□□ -1.62
PTPRO-208ENST00000542557 NMUP48645 174 aa4.91□□□□□ -1.62
PTPRO-208ENST00000542557 RPL32P62910 135 aaKnown RBP4.91□□□□□ -1.62
PTPRO-208ENST00000542557 VAMP3Q15836 100 aa4.91□□□□□ -1.62
PTPRO-208ENST00000542557 NRGNQ92686 78 aa4.91□□□□□ -1.62
PTPRO-208ENST00000542557 DUX5Q96PT3 197 aa4.91□□□□□ -1.62
PTPRO-208ENST00000542557 HIGD1BQ9P298 99 aa4.91□□□□□ -1.62
PTPRO-208ENST00000542557 VPREB3Q9UKI3 123 aa4.91□□□□□ -1.62
PTPRO-208ENST00000542557 A0A087WX48 190 aa4.91□□□□□ -1.62
PTPRO-208ENST00000542557 LGALS9O00182 355 aa4.91□□□□□ -1.62
PTPRO-208ENST00000542557 ELANEP08246 267 aa4.91□□□□□ -1.62
PTPRO-208ENST00000542557 PCP2Q8IVA1 136 aa4.91□□□□□ -1.62
PTPRO-208ENST00000542557 IGKV3-7A0A075B6H7 116 aa4.9□□□□□ -1.62
PTPRO-208ENST00000542557 A6NDN8 102 aa4.9□□□□□ -1.62
PTPRO-208ENST00000542557 PRSS29PA6NIE9 313 aa4.9□□□□□ -1.62
PTPRO-208ENST00000542557 RNF223E7ERA6 249 aa4.9□□□□□ -1.62
PTPRO-208ENST00000542557 LGALS1P09382 135 aaKnown RBP4.9□□□□□ -1.62
PTPRO-208ENST00000542557 COX6B1P14854 86 aa4.9□□□□□ -1.62
PTPRO-208ENST00000542557 PLNP26678 52 aa4.9□□□□□ -1.62
PTPRO-208ENST00000542557 Q8N1Y9 231 aa4.9□□□□□ -1.62
PTPRO-208ENST00000542557 C14orf178Q8N769 122 aaPredicted RBP4.9□□□□□ -1.62
PTPRO-208ENST00000542557 TOMM6Q96B49 74 aa4.9□□□□□ -1.62
PTPRO-208ENST00000542557 IGHV4OR15-8A0A075B7B6 117 aa4.9□□□□□ -1.63
PTPRO-208ENST00000542557 TRAV26-1A0A087WT03 109 aa4.9□□□□□ -1.63
PTPRO-208ENST00000542557 A0A087WW49 117 aa4.9□□□□□ -1.63
PTPRO-208ENST00000542557 A0A1W2PRX2 142 aa4.9□□□□□ -1.63
PTPRO-208ENST00000542557 C7orf71A4D174 169 aa4.9□□□□□ -1.63
PTPRO-208ENST00000542557 TMEM238C9JI98 176 aa4.9□□□□□ -1.63
PTPRO-208ENST00000542557 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.9□□□□□ -1.63
PTPRO-208ENST00000542557 GNRH2O43555 120 aa4.9□□□□□ -1.63
PTPRO-208ENST00000542557 EDN2P20800 178 aa4.9□□□□□ -1.63
PTPRO-208ENST00000542557 FAM159AQ6UWV7 190 aa4.9□□□□□ -1.63
PTPRO-208ENST00000542557 KIF25-AS1Q9Y6Z4 181 aa4.9□□□□□ -1.63
PTPRO-208ENST00000542557 CELSR2Q9HCU4 2923 aa4.9□□□□□ -1.63
PTPRO-208ENST00000542557 IGKV2D-26A0A0A0MRZ7 120 aa4.9□□□□□ -1.63
PTPRO-208ENST00000542557 LINC01549A6NIU2 74 aa4.9□□□□□ -1.63
PTPRO-208ENST00000542557 H3BRM9 83 aa4.9□□□□□ -1.63
PTPRO-208ENST00000542557 K7EP13 123 aa4.9□□□□□ -1.63
PTPRO-208ENST00000542557 K7EQG2 157 aa4.9□□□□□ -1.63
PTPRO-208ENST00000542557 SNRPD3P62318 126 aaKnown RBP4.9□□□□□ -1.63
PTPRO-208ENST00000542557 ZC2HC1BQ5TFG8 222 aa4.9□□□□□ -1.63
PTPRO-208ENST00000542557 Q6YL49 198 aa4.9□□□□□ -1.63
PTPRO-208ENST00000542557 MRPL35Q9NZE8 188 aaKnown RBP4.9□□□□□ -1.63
PTPRO-208ENST00000542557 SPG11Q96JI7 2443 aa4.89□□□□□ -1.63
PTPRO-208ENST00000542557 A0A0J9YX75 114 aa4.89□□□□□ -1.63
PTPRO-208ENST00000542557 F8VRH5 84 aa4.89□□□□□ -1.63
PTPRO-208ENST00000542557 MGPP08493 103 aa4.89□□□□□ -1.63
PTPRO-208ENST00000542557 SRD5A1P18405 259 aa4.89□□□□□ -1.63
PTPRO-208ENST00000542557 LINC00315P59091 139 aa4.89□□□□□ -1.63
PTPRO-208ENST00000542557 RPL39LQ96EH5 51 aaKnown RBP4.89□□□□□ -1.63
PTPRO-208ENST00000542557 UBE2E2Q96LR5 201 aa4.89□□□□□ -1.63
PTPRO-208ENST00000542557 ZNF702PQ9H963 129 aa4.89□□□□□ -1.63
PTPRO-208ENST00000542557 H7C1H1 209 aa4.89□□□□□ -1.63
PTPRO-208ENST00000542557 IGHV4-31P0DP07 118 aa4.89□□□□□ -1.63
PTPRO-208ENST00000542557 C10orf99Q6UWK7 81 aa4.89□□□□□ -1.63
PTPRO-208ENST00000542557 C9orf85Q96MD7 179 aa4.89□□□□□ -1.63
PTPRO-208ENST00000542557 MYO18BQ8IUG5 2567 aa4.88□□□□□ -1.63
PTPRO-208ENST00000542557 C9orf118A6NHY6 69 aa4.88□□□□□ -1.63
PTPRO-208ENST00000542557 DUSP14O95147 198 aaKnown RBP4.88□□□□□ -1.63
PTPRO-208ENST00000542557 TCTAP57738 103 aa4.88□□□□□ -1.63
PTPRO-208ENST00000542557 GTSCR1Q86UQ5 136 aa4.88□□□□□ -1.63
PTPRO-208ENST00000542557 NEXN-AS1Q8NBZ9 246 aa4.88□□□□□ -1.63
PTPRO-208ENST00000542557 SCGB3A1Q96QR1 104 aa4.88□□□□□ -1.63
PTPRO-208ENST00000542557 YAE1D1Q9NRH1 226 aa4.88□□□□□ -1.63
PTPRO-208ENST00000542557 TRAV8-6A0A0B4J262 113 aa4.88□□□□□ -1.63
PTPRO-208ENST00000542557 SPRY2O43597 315 aa4.88□□□□□ -1.63
PTPRO-208ENST00000542557 ZNF688P0C7X2 276 aa4.88□□□□□ -1.63
PTPRO-208ENST00000542557 SEC61GP60059 68 aa4.88□□□□□ -1.63
PTPRO-208ENST00000542557 C2orf66Q6UXQ4 117 aa4.88□□□□□ -1.63
PTPRO-208ENST00000542557 CHAC1Q9BUX1 264 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms