RNA–Protein interactions for RNA: ENST00000540896.1

CLTCL1-206, Transcript of clathrin heavy chain like 1, humanhuman

TSL 4

Gene CLTCL1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-206ENST00000540896 TIMM8BQ9Y5J9 83 aaPredicted RBP4.86□□□□□ -1.63
CLTCL1-206ENST00000540896 SMIM27A0A1W2PRY6 76 aa4.85□□□□□ -1.63
CLTCL1-206ENST00000540896 FAM231BA6NCW3 169 aa4.85□□□□□ -1.63
CLTCL1-206ENST00000540896 HIGD1CA8MV81 97 aa4.85□□□□□ -1.63
CLTCL1-206ENST00000540896 CRXO43186 299 aaPredicted RBP4.85□□□□□ -1.63
CLTCL1-206ENST00000540896 GNRH2O43555 120 aa4.85□□□□□ -1.63
CLTCL1-206ENST00000540896 IGHV4-30-4P0DP06 118 aa4.85□□□□□ -1.63
CLTCL1-206ENST00000540896 ASIPP42127 132 aa4.85□□□□□ -1.63
CLTCL1-206ENST00000540896 KRTAP5-3Q6L8H2 238 aa4.85□□□□□ -1.63
CLTCL1-206ENST00000540896 BTF3L4Q96K17 158 aa4.85□□□□□ -1.63
CLTCL1-206ENST00000540896 NEU1Q99519 415 aa4.85□□□□□ -1.63
CLTCL1-206ENST00000540896 C20orf144Q9BQM9 153 aa4.85□□□□□ -1.63
CLTCL1-206ENST00000540896 GFRA4Q9GZZ7 299 aa4.85□□□□□ -1.63
CLTCL1-206ENST00000540896 DNAH3Q8TD57 4116 aa4.85□□□□□ -1.63
CLTCL1-206ENST00000540896 TRGV11A0A075B6L2 103 aa4.84□□□□□ -1.63
CLTCL1-206ENST00000540896 TRAV9-1A0A075B6T8 112 aa4.84□□□□□ -1.63
CLTCL1-206ENST00000540896 KIR2DL5BA0A0G2JN68 375 aa4.84□□□□□ -1.63
CLTCL1-206ENST00000540896 KIR2DL5BA0A0G2JPC4 375 aa4.84□□□□□ -1.63
CLTCL1-206ENST00000540896 F2Z2F3 143 aa4.84□□□□□ -1.63
CLTCL1-206ENST00000540896 H3BVH4 76 aa4.84□□□□□ -1.63
CLTCL1-206ENST00000540896 RAB4BP61018 213 aa4.84□□□□□ -1.63
CLTCL1-206ENST00000540896 ELOBQ15370 118 aa4.84□□□□□ -1.63
CLTCL1-206ENST00000540896 DEFB121Q5J5C9 76 aa4.84□□□□□ -1.63
CLTCL1-206ENST00000540896 MRPL54Q6P161 138 aaKnown RBP4.84□□□□□ -1.63
CLTCL1-206ENST00000540896 LYZL1Q6UWQ5 148 aa4.84□□□□□ -1.63
CLTCL1-206ENST00000540896 KIR2DL5AQ8N109 375 aa4.84□□□□□ -1.63
CLTCL1-206ENST00000540896 TMEM256Q8N2U0 113 aa4.84□□□□□ -1.63
CLTCL1-206ENST00000540896 FER1L6-AS1Q8NA97 138 aa4.84□□□□□ -1.63
CLTCL1-206ENST00000540896 NUP35Q8NFH5 326 aa4.84□□□□□ -1.63
CLTCL1-206ENST00000540896 KIR2DL5BQ8NHK3 375 aa4.84□□□□□ -1.63
CLTCL1-206ENST00000540896 GTSF1Q8WW33 167 aa4.84□□□□□ -1.63
CLTCL1-206ENST00000540896 FAM210BQ96KR6 192 aa4.84□□□□□ -1.63
CLTCL1-206ENST00000540896 PYGO2Q9BRQ0 406 aa4.84□□□□□ -1.63
CLTCL1-206ENST00000540896 PHLDA3Q9Y5J5 127 aa4.84□□□□□ -1.63
CLTCL1-206ENST00000540896 SORL1Q92673 2214 aa4.84□□□□□ -1.64
CLTCL1-206ENST00000540896 TGIF2-C20orf24A0A0A6YYL0 155 aa4.83□□□□□ -1.64
CLTCL1-206ENST00000540896 MUC21A0A0G2JKD1 596 aa4.83□□□□□ -1.64
CLTCL1-206ENST00000540896 MUC21A0A140T8X8 626 aa4.83□□□□□ -1.64
CLTCL1-206ENST00000540896 A0A1B0GUT8 65 aa4.83□□□□□ -1.64
CLTCL1-206ENST00000540896 UBE2CO00762 179 aa4.83□□□□□ -1.64
CLTCL1-206ENST00000540896 TYMSP04818 313 aa4.83□□□□□ -1.64
CLTCL1-206ENST00000540896 ARMS2P0C7Q2 107 aa4.83□□□□□ -1.64
CLTCL1-206ENST00000540896 RBMY1A1P0DJD3 496 aaKnown RBP4.83□□□□□ -1.64
CLTCL1-206ENST00000540896 RBMY1CP0DJD4 496 aa4.83□□□□□ -1.64
CLTCL1-206ENST00000540896 CAMPP49913 170 aa4.83□□□□□ -1.64
CLTCL1-206ENST00000540896 FOXA3P55318 350 aaPredicted RBP4.83□□□□□ -1.64
CLTCL1-206ENST00000540896 DEFA6Q01524 100 aa4.83□□□□□ -1.64
CLTCL1-206ENST00000540896 RIGQ13278 110 aa4.83□□□□□ -1.64
CLTCL1-206ENST00000540896 RBMY1FQ15415 496 aaKnown RBP4.83□□□□□ -1.64
CLTCL1-206ENST00000540896 TWIST1Q15672 202 aa4.83□□□□□ -1.64
CLTCL1-206ENST00000540896 TDRG1Q3Y452 100 aa4.83□□□□□ -1.64
CLTCL1-206ENST00000540896 SPANXN1Q5VSR9 72 aa4.83□□□□□ -1.64
CLTCL1-206ENST00000540896 C1orf158Q8N1D5 194 aa4.83□□□□□ -1.64
CLTCL1-206ENST00000540896 RCHY1Q96PM5 261 aa4.83□□□□□ -1.64
CLTCL1-206ENST00000540896 TP53TG3Q9ULZ0 132 aa4.83□□□□□ -1.64
CLTCL1-206ENST00000540896 TRBV24-1A0A075B6N3 115 aa4.82□□□□□ -1.64
CLTCL1-206ENST00000540896 IGHV3-16A0A0C4DH30 117 aa4.82□□□□□ -1.64
CLTCL1-206ENST00000540896 COLCA2A8K830 154 aa4.82□□□□□ -1.64
CLTCL1-206ENST00000540896 M0R381 172 aa4.82□□□□□ -1.64
CLTCL1-206ENST00000540896 PRM2P04554 102 aa4.82□□□□□ -1.64
CLTCL1-206ENST00000540896 S100A8P05109 93 aa4.82□□□□□ -1.64
CLTCL1-206ENST00000540896 CXCL1P09341 107 aa4.82□□□□□ -1.64
CLTCL1-206ENST00000540896 GIG44P09565 113 aaPredicted RBP4.82□□□□□ -1.64
CLTCL1-206ENST00000540896 IGLC6P0CF74 106 aa4.82□□□□□ -1.64
CLTCL1-206ENST00000540896 RPS10P46783 165 aaKnown RBP4.82□□□□□ -1.64
CLTCL1-206ENST00000540896 CACNG7P62955 275 aa4.82□□□□□ -1.64
CLTCL1-206ENST00000540896 ZNF415Q09FC8 603 aa4.82□□□□□ -1.64
CLTCL1-206ENST00000540896 RRN3P1Q2M238 152 aa4.82□□□□□ -1.64
CLTCL1-206ENST00000540896 DEFB135Q30KP9 77 aa4.82□□□□□ -1.64
CLTCL1-206ENST00000540896 SMIM15Q7Z3B0 74 aa4.82□□□□□ -1.64
CLTCL1-206ENST00000540896 LINC00467Q9BRT7 94 aa4.82□□□□□ -1.64
CLTCL1-206ENST00000540896 GSN-AS1Q9NRJ2 163 aa4.82□□□□□ -1.64
CLTCL1-206ENST00000540896 MDFICQ9P1T7 246 aa4.82□□□□□ -1.64
CLTCL1-206ENST00000540896 A0A1B0GW15 77 aa4.81□□□□□ -1.64
CLTCL1-206ENST00000540896 SNURFLB1AK76 121 aa4.81□□□□□ -1.64
CLTCL1-206ENST00000540896 K7EIL1 84 aa4.81□□□□□ -1.64
CLTCL1-206ENST00000540896 SPRY2O43597 315 aa4.81□□□□□ -1.64
CLTCL1-206ENST00000540896 OR5AL1P0C617 328 aa4.81□□□□□ -1.64
CLTCL1-206ENST00000540896 FRMD6-AS1P0C7T7 363 aa4.81□□□□□ -1.64
CLTCL1-206ENST00000540896 RNASE3P12724 160 aaKnown RBP4.81□□□□□ -1.64
CLTCL1-206ENST00000540896 AZU1P20160 251 aa4.81□□□□□ -1.64
CLTCL1-206ENST00000540896 RAB5AP20339 215 aa4.81□□□□□ -1.64
CLTCL1-206ENST00000540896 NTF3P20783 257 aa4.81□□□□□ -1.64
CLTCL1-206ENST00000540896 CTRLP40313 264 aa4.81□□□□□ -1.64
CLTCL1-206ENST00000540896 EMP1P54849 157 aa4.81□□□□□ -1.64
CLTCL1-206ENST00000540896 ZNF876PQ49A33 203 aa4.81□□□□□ -1.64
CLTCL1-206ENST00000540896 COX19Q49B96 90 aa4.81□□□□□ -1.64
CLTCL1-206ENST00000540896 DNLZQ5SXM8 178 aa4.81□□□□□ -1.64
CLTCL1-206ENST00000540896 WDR73Q6P4I2 378 aa4.81□□□□□ -1.64
CLTCL1-206ENST00000540896 ZNF493Q6ZR52 646 aa4.81□□□□□ -1.64
CLTCL1-206ENST00000540896 Q6ZWC4 215 aa4.81□□□□□ -1.64
CLTCL1-206ENST00000540896 ATP5L2Q7Z4Y8 100 aa4.81□□□□□ -1.64
CLTCL1-206ENST00000540896 ZFP82Q8N141 532 aa4.81□□□□□ -1.64
CLTCL1-206ENST00000540896 CSNK1G2-AS1Q8NCQ2 148 aa4.81□□□□□ -1.64
CLTCL1-206ENST00000540896 OR11H2Q8NH07 326 aa4.81□□□□□ -1.64
CLTCL1-206ENST00000540896 OR10AG1Q8NH19 301 aa4.81□□□□□ -1.64
CLTCL1-206ENST00000540896 FRZBQ92765 325 aa4.81□□□□□ -1.64
CLTCL1-206ENST00000540896 SMIM9A6NGZ8 99 aa4.8□□□□□ -1.64
CLTCL1-206ENST00000540896 A8MZ25 164 aa4.8□□□□□ -1.64
CLTCL1-206ENST00000540896 SNAI2O43623 268 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms