RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 SVIPQ8NHG7 77 aa9.8□□□□□ -0.84
CDK5RAP3-202ENST00000536708 PRELID3AQ96N28 172 aa9.8□□□□□ -0.84
CDK5RAP3-202ENST00000536708 CITED2Q99967 270 aaPredicted RBP9.8□□□□□ -0.84
CDK5RAP3-202ENST00000536708 SIGLEC8Q9NYZ4 499 aa9.8□□□□□ -0.84
CDK5RAP3-202ENST00000536708 SELENOKQ9Y6D0 94 aa9.8□□□□□ -0.84
CDK5RAP3-202ENST00000536708 STAB1Q9NY15 2570 aa9.8□□□□□ -0.84
CDK5RAP3-202ENST00000536708 TMSB15BA0A087X1C1 80 aa9.79□□□□□ -0.84
CDK5RAP3-202ENST00000536708 A0A096LNJ9 63 aa9.79□□□□□ -0.84
CDK5RAP3-202ENST00000536708 TRAV8-6A0A0B4J262 113 aa9.79□□□□□ -0.84
CDK5RAP3-202ENST00000536708 IFI27P40305 119 aaPredicted RBP9.79□□□□□ -0.84
CDK5RAP3-202ENST00000536708 IGFL4Q6B9Z1 124 aa9.79□□□□□ -0.84
CDK5RAP3-202ENST00000536708 C8orf86Q6ZUL3 223 aa9.79□□□□□ -0.84
CDK5RAP3-202ENST00000536708 Q8TAT8 98 aa9.79□□□□□ -0.84
CDK5RAP3-202ENST00000536708 NCR2O95944 276 aa9.79□□□□□ -0.84
CDK5RAP3-202ENST00000536708 LINC01546A6NGU7 62 aa9.78□□□□□ -0.84
CDK5RAP3-202ENST00000536708 PRAC2D3DTV9 90 aa9.78□□□□□ -0.84
CDK5RAP3-202ENST00000536708 SEC11AP67812 179 aa9.78□□□□□ -0.84
CDK5RAP3-202ENST00000536708 DPF1Q92782 380 aa9.78□□□□□ -0.84
CDK5RAP3-202ENST00000536708 METTL26Q96S19 204 aa9.78□□□□□ -0.84
CDK5RAP3-202ENST00000536708 TIMM8BQ9Y5J9 83 aaPredicted RBP9.78□□□□□ -0.84
CDK5RAP3-202ENST00000536708 HOXD3P31249 432 aaPredicted RBP9.77□□□□□ -0.84
CDK5RAP3-202ENST00000536708 SLURP1P55000 103 aa9.77□□□□□ -0.84
CDK5RAP3-202ENST00000536708 TMEM97Q5BJF2 176 aa9.77□□□□□ -0.84
CDK5RAP3-202ENST00000536708 C4orf3Q8WVX3 66 aa9.77□□□□□ -0.84
CDK5RAP3-202ENST00000536708 TRAV8-2A0A0B4J237 113 aa9.77□□□□□ -0.85
CDK5RAP3-202ENST00000536708 C7orf71A4D174 169 aa9.77□□□□□ -0.85
CDK5RAP3-202ENST00000536708 NDUFA4O00483 81 aa9.77□□□□□ -0.85
CDK5RAP3-202ENST00000536708 FGF6P10767 208 aa9.77□□□□□ -0.85
CDK5RAP3-202ENST00000536708 ERCC8Q13216 396 aa9.77□□□□□ -0.85
CDK5RAP3-202ENST00000536708 TWIST1Q15672 202 aa9.77□□□□□ -0.85
CDK5RAP3-202ENST00000536708 RNF185Q96GF1 192 aa9.77□□□□□ -0.85
CDK5RAP3-202ENST00000536708 ORM1P02763 201 aa9.76□□□□□ -0.85
CDK5RAP3-202ENST00000536708 LGALS9BQ3B8N2 356 aa9.76□□□□□ -0.85
CDK5RAP3-202ENST00000536708 FAM106AQ4KMX7 169 aa9.76□□□□□ -0.85
CDK5RAP3-202ENST00000536708 TM4SF20Q53R12 229 aa9.76□□□□□ -0.85
CDK5RAP3-202ENST00000536708 LGALS9CQ6DKI2 356 aa9.76□□□□□ -0.85
CDK5RAP3-202ENST00000536708 PRIMA1Q86XR5 153 aa9.76□□□□□ -0.85
CDK5RAP3-202ENST00000536708 OR11H1Q8NG94 326 aa9.76□□□□□ -0.85
CDK5RAP3-202ENST00000536708 AGPAT4-IT1Q9H0P7 198 aa9.76□□□□□ -0.85
CDK5RAP3-202ENST00000536708 K7ERU9 68 aa9.75□□□□□ -0.85
CDK5RAP3-202ENST00000536708 CKS2P33552 79 aa9.75□□□□□ -0.85
CDK5RAP3-202ENST00000536708 SYNJ2BPP57105 145 aa9.75□□□□□ -0.85
CDK5RAP3-202ENST00000536708 UFSP1Q6NVU6 142 aa9.75□□□□□ -0.85
CDK5RAP3-202ENST00000536708 C9orf47Q6ZRZ4 202 aa9.75□□□□□ -0.85
CDK5RAP3-202ENST00000536708 WFDC12Q8WWY7 111 aa9.75□□□□□ -0.85
CDK5RAP3-202ENST00000536708 COL6A5A8TX70 2615 aa9.75□□□□□ -0.85
CDK5RAP3-202ENST00000536708 GAGE12BA1L429 117 aa9.75□□□□□ -0.85
CDK5RAP3-202ENST00000536708 ADARB2-AS1A8MUL3 147 aa9.75□□□□□ -0.85
CDK5RAP3-202ENST00000536708 HBDP02042 147 aa9.75□□□□□ -0.85
CDK5RAP3-202ENST00000536708 RNF182Q8N6D2 247 aa9.75□□□□□ -0.85
CDK5RAP3-202ENST00000536708 OR1N2Q8NGR9 330 aa9.75□□□□□ -0.85
CDK5RAP3-202ENST00000536708 RAX2Q96IS3 184 aa9.75□□□□□ -0.85
CDK5RAP3-202ENST00000536708 LOC389332A0A1B0GUA5 103 aa9.74□□□□□ -0.85
CDK5RAP3-202ENST00000536708 H3BRM9 83 aa9.74□□□□□ -0.85
CDK5RAP3-202ENST00000536708 NPYP01303 97 aa9.74□□□□□ -0.85
CDK5RAP3-202ENST00000536708 KRTAP24-1Q3LI83 254 aa9.74□□□□□ -0.85
CDK5RAP3-202ENST00000536708 LENEPQ9Y5L5 61 aa9.74□□□□□ -0.85
CDK5RAP3-202ENST00000536708 IGKV3D-20A0A0C4DH25 116 aa9.74□□□□□ -0.85
CDK5RAP3-202ENST00000536708 C9orf118A6NHY6 69 aa9.74□□□□□ -0.85
CDK5RAP3-202ENST00000536708 SNAI2O43623 268 aa9.74□□□□□ -0.85
CDK5RAP3-202ENST00000536708 NSUN5P1Q3KNT7 163 aa9.74□□□□□ -0.85
CDK5RAP3-202ENST00000536708 OR8A1Q8NGG7 326 aa9.74□□□□□ -0.85
CDK5RAP3-202ENST00000536708 GLMPQ8WWB7 406 aa9.74□□□□□ -0.85
CDK5RAP3-202ENST00000536708 TSSC4Q9Y5U2 329 aaPredicted RBP9.74□□□□□ -0.85
CDK5RAP3-202ENST00000536708 A6NDN8 102 aa9.73□□□□□ -0.85
CDK5RAP3-202ENST00000536708 GAGE10A6NGK3 116 aa9.73□□□□□ -0.85
CDK5RAP3-202ENST00000536708 LINC01619G3V211 115 aa9.73□□□□□ -0.85
CDK5RAP3-202ENST00000536708 HSD52Q0P140 79 aa9.73□□□□□ -0.85
CDK5RAP3-202ENST00000536708 TMEM78Q5T7P6 136 aa9.73□□□□□ -0.85
CDK5RAP3-202ENST00000536708 GTF2H5Q6ZYL4 71 aa9.73□□□□□ -0.85
CDK5RAP3-202ENST00000536708 MAP1LC3AQ9H492 121 aa9.73□□□□□ -0.85
CDK5RAP3-202ENST00000536708 DAZ1Q9NQZ3 744 aaKnown RBP9.73□□□□□ -0.85
CDK5RAP3-202ENST00000536708 IGHV4-4A0A075B6R2 117 aa9.72□□□□□ -0.85
CDK5RAP3-202ENST00000536708 GPHB5Q86YW7 130 aa9.72□□□□□ -0.85
CDK5RAP3-202ENST00000536708 BOD1L2Q8IYS8 172 aa9.72□□□□□ -0.85
CDK5RAP3-202ENST00000536708 CSTL1Q9H114 145 aa9.72□□□□□ -0.85
CDK5RAP3-202ENST00000536708 MSRB1Q9NZV6 116 aa9.72□□□□□ -0.85
CDK5RAP3-202ENST00000536708 PRSS47A8MTI9 375 aa9.72□□□□□ -0.85
CDK5RAP3-202ENST00000536708 SMKR1H3BMG3 65 aa9.72□□□□□ -0.85
CDK5RAP3-202ENST00000536708 K7EP34 96 aa9.72□□□□□ -0.85
CDK5RAP3-202ENST00000536708 DLX4Q92988 240 aaPredicted RBP9.72□□□□□ -0.85
CDK5RAP3-202ENST00000536708 AP1S3Q96PC3 154 aa9.72□□□□□ -0.85
CDK5RAP3-202ENST00000536708 NXT2Q9NPJ8 142 aaKnown RBP9.72□□□□□ -0.85
CDK5RAP3-202ENST00000536708 C11orf21Q9P2W6 132 aa9.72□□□□□ -0.85
CDK5RAP3-202ENST00000536708 CACNG7P62955 275 aa9.71□□□□□ -0.86
CDK5RAP3-202ENST00000536708 FHL3Q13643 280 aa9.71□□□□□ -0.86
CDK5RAP3-202ENST00000536708 OR9G4Q8NGQ1 327 aa9.71□□□□□ -0.86
CDK5RAP3-202ENST00000536708 IFI27L1Q96BM0 104 aa9.71□□□□□ -0.86
CDK5RAP3-202ENST00000536708 TRRAPQ9Y4A5 3859 aa9.71□□□□□ -0.86
CDK5RAP3-202ENST00000536708 IGHV7-4-1A0A0J9YVY3 117 aa9.7□□□□□ -0.86
CDK5RAP3-202ENST00000536708 SIVA1O15304 175 aa9.7□□□□□ -0.86
CDK5RAP3-202ENST00000536708 SAP30O75446 220 aa9.7□□□□□ -0.86
CDK5RAP3-202ENST00000536708 KIR3DS1Q14943 382 aa9.7□□□□□ -0.86
CDK5RAP3-202ENST00000536708 CCL24O00175 119 aa9.7□□□□□ -0.86
CDK5RAP3-202ENST00000536708 TNFRSF6BO95407 300 aa9.7□□□□□ -0.86
CDK5RAP3-202ENST00000536708 PSMG4Q5JS54 123 aa9.7□□□□□ -0.86
CDK5RAP3-202ENST00000536708 ADAMTSL5Q6ZMM2 481 aa9.7□□□□□ -0.86
CDK5RAP3-202ENST00000536708 RHPN1-AS1Q9BWJ2 59 aa9.7□□□□□ -0.86
CDK5RAP3-202ENST00000536708 IGKV3-7A0A075B6H7 116 aa9.69□□□□□ -0.86
CDK5RAP3-202ENST00000536708 H3BUT2 72 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms