RNA–Protein interactions for RNA: ENST00000535915.5

LDLR-203, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-203ENST00000535915 HHLA3Q9XRX5 114 aa9.94□□□□□ -0.82
LDLR-203ENST00000535915 ANKRD17O75179 2603 aaKnown RBP9.94□□□□□ -0.82
LDLR-203ENST00000535915 HSD52Q0P140 79 aa9.93□□□□□ -0.82
LDLR-203ENST00000535915 FAM19A4Q96LR4 140 aa9.93□□□□□ -0.82
LDLR-203ENST00000535915 DPM2O94777 84 aa9.93□□□□□ -0.82
LDLR-203ENST00000535915 EDN2P20800 178 aa9.93□□□□□ -0.82
LDLR-203ENST00000535915 CFHR3Q02985 330 aa9.93□□□□□ -0.82
LDLR-203ENST00000535915 C14orf178Q8N769 122 aaPredicted RBP9.93□□□□□ -0.82
LDLR-203ENST00000535915 SMPXQ9UHP9 88 aa9.93□□□□□ -0.82
LDLR-203ENST00000535915 IGKV2D-26A0A0A0MRZ7 120 aa9.92□□□□□ -0.82
LDLR-203ENST00000535915 TEX48A0A1B0GUV7 120 aa9.92□□□□□ -0.82
LDLR-203ENST00000535915 TMEM8BA6NDV4 472 aa9.92□□□□□ -0.82
LDLR-203ENST00000535915 GNRH2O43555 120 aa9.92□□□□□ -0.82
LDLR-203ENST00000535915 ADAMTSL5Q6ZMM2 481 aa9.92□□□□□ -0.82
LDLR-203ENST00000535915 SMIM2Q9BVW6 85 aa9.92□□□□□ -0.82
LDLR-203ENST00000535915 DPH3P1Q9H4G8 78 aa9.92□□□□□ -0.82
LDLR-203ENST00000535915 A0A1W2PPM0 123 aa9.92□□□□□ -0.82
LDLR-203ENST00000535915 PSMG4Q5JS54 123 aa9.92□□□□□ -0.82
LDLR-203ENST00000535915 MUC4Q99102 2169 aa9.92□□□□□ -0.82
LDLR-203ENST00000535915 TMEM160Q9NX00 188 aa9.92□□□□□ -0.82
LDLR-203ENST00000535915 MGPP08493 103 aa9.92□□□□□ -0.82
LDLR-203ENST00000535915 FABP2P12104 132 aa9.92□□□□□ -0.82
LDLR-203ENST00000535915 GTSCR1Q86UQ5 136 aa9.92□□□□□ -0.82
LDLR-203ENST00000535915 WFDC12Q8WWY7 111 aa9.92□□□□□ -0.82
LDLR-203ENST00000535915 IGHV4-59P01825 116 aa9.91□□□□□ -0.82
LDLR-203ENST00000535915 ZC2HC1BQ5TFG8 222 aa9.91□□□□□ -0.82
LDLR-203ENST00000535915 MRPL35Q9NZE8 188 aaKnown RBP9.91□□□□□ -0.82
LDLR-203ENST00000535915 ZANQ9Y493 2812 aa9.91□□□□□ -0.82
LDLR-203ENST00000535915 GATA3P23771 443 aa9.91□□□□□ -0.82
LDLR-203ENST00000535915 SUMO2P61956 95 aaKnown RBP9.91□□□□□ -0.82
LDLR-203ENST00000535915 APRG1Q8IVJ8 170 aa9.91□□□□□ -0.82
LDLR-203ENST00000535915 RASL10AQ92737 203 aa9.91□□□□□ -0.82
LDLR-203ENST00000535915 TTTY13Q9BZ97 58 aa9.91□□□□□ -0.82
LDLR-203ENST00000535915 DEFB112Q30KQ8 113 aa9.9□□□□□ -0.82
LDLR-203ENST00000535915 RPL39LQ96EH5 51 aaKnown RBP9.9□□□□□ -0.82
LDLR-203ENST00000535915 CENPEQ02224 2701 aa9.9□□□□□ -0.82
LDLR-203ENST00000535915 TRBV7-9A0A0J9YWB2 115 aa9.9□□□□□ -0.83
LDLR-203ENST00000535915 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.9□□□□□ -0.83
LDLR-203ENST00000535915 K7EMT4 169 aa9.9□□□□□ -0.83
LDLR-203ENST00000535915 MED14OSP0DP75 135 aa9.9□□□□□ -0.83
LDLR-203ENST00000535915 RNASE3P12724 160 aaKnown RBP9.9□□□□□ -0.83
LDLR-203ENST00000535915 ID1P41134 155 aa9.9□□□□□ -0.83
LDLR-203ENST00000535915 DSCR9P59020 149 aa9.9□□□□□ -0.83
LDLR-203ENST00000535915 PSMB8P28062 276 aa9.89□□□□□ -0.83
LDLR-203ENST00000535915 TSSC4Q9Y5U2 329 aaPredicted RBP9.89□□□□□ -0.83
LDLR-203ENST00000535915 DOPEY2Q9Y3R5 2298 aa9.89□□□□□ -0.83
LDLR-203ENST00000535915 A0A087WX48 190 aa9.89□□□□□ -0.83
LDLR-203ENST00000535915 CKS1BP61024 79 aa9.89□□□□□ -0.83
LDLR-203ENST00000535915 ORMDL2Q53FV1 153 aa9.89□□□□□ -0.83
LDLR-203ENST00000535915 C10orf99Q6UWK7 81 aa9.89□□□□□ -0.83
LDLR-203ENST00000535915 C20orf78Q9BR46 151 aa9.89□□□□□ -0.83
LDLR-203ENST00000535915 GAGE12HA6NDE8 117 aa9.88□□□□□ -0.83
LDLR-203ENST00000535915 CD300EQ496F6 205 aaPredicted RBP9.88□□□□□ -0.83
LDLR-203ENST00000535915 DCANP1Q8TF63 244 aa9.88□□□□□ -0.83
LDLR-203ENST00000535915 USP9YO00507 2555 aaPredicted RBP9.88□□□□□ -0.83
LDLR-203ENST00000535915 ACACBO00763 2458 aa9.88□□□□□ -0.83
LDLR-203ENST00000535915 SAMD5Q5TGI4 173 aa9.88□□□□□ -0.83
LDLR-203ENST00000535915 FAM159AQ6UWV7 190 aa9.88□□□□□ -0.83
LDLR-203ENST00000535915 LINC01356Q8N9X3 169 aa9.88□□□□□ -0.83
LDLR-203ENST00000535915 KLLNB2CW77 178 aa9.87□□□□□ -0.83
LDLR-203ENST00000535915 J3QR89 54 aa9.87□□□□□ -0.83
LDLR-203ENST00000535915 SLC25A16P16260 332 aa9.87□□□□□ -0.83
LDLR-203ENST00000535915 SCGB3A1Q96QR1 104 aa9.87□□□□□ -0.83
LDLR-203ENST00000535915 ZNF580Q9UK33 172 aa9.87□□□□□ -0.83
LDLR-203ENST00000535915 TRAV26-1A0A087WT03 109 aa9.86□□□□□ -0.83
LDLR-203ENST00000535915 PLNP26678 52 aa9.86□□□□□ -0.83
LDLR-203ENST00000535915 MAPK1IP1LQ8NDC0 245 aa9.86□□□□□ -0.83
LDLR-203ENST00000535915 TOMM6Q96B49 74 aa9.86□□□□□ -0.83
LDLR-203ENST00000535915 CHAC1Q9BUX1 264 aa9.86□□□□□ -0.83
LDLR-203ENST00000535915 HIGD1BQ9P298 99 aa9.86□□□□□ -0.83
LDLR-203ENST00000535915 AGRNO00468 2067 aa9.86□□□□□ -0.83
LDLR-203ENST00000535915 POLQO75417 2590 aa9.86□□□□□ -0.83
LDLR-203ENST00000535915 TRBV25-1A0A075B6N4 114 aa9.86□□□□□ -0.83
LDLR-203ENST00000535915 TRAV12-3A0A0B4J271 114 aa9.86□□□□□ -0.83
LDLR-203ENST00000535915 TGFAP01135 160 aa9.86□□□□□ -0.83
LDLR-203ENST00000535915 GCSHP23434 173 aa9.86□□□□□ -0.83
LDLR-203ENST00000535915 MXRA5Q9NR99 2828 aa9.86□□□□□ -0.83
LDLR-203ENST00000535915 ZNF688P0C7X2 276 aa9.86□□□□□ -0.83
LDLR-203ENST00000535915 RNF223E7ERA6 249 aa9.85□□□□□ -0.83
LDLR-203ENST00000535915 H7C1H1 209 aa9.85□□□□□ -0.83
LDLR-203ENST00000535915 K7EMI3 77 aa9.85□□□□□ -0.83
LDLR-203ENST00000535915 SMIM13P0DJ93 91 aa9.85□□□□□ -0.83
LDLR-203ENST00000535915 CRYBA4P53673 196 aa9.85□□□□□ -0.83
LDLR-203ENST00000535915 FBN2P35556 2912 aa9.85□□□□□ -0.83
LDLR-203ENST00000535915 FAM208BQ5VWN6 2430 aa9.85□□□□□ -0.83
LDLR-203ENST00000535915 TRAV12-1A0A0B4J245 112 aa9.85□□□□□ -0.83
LDLR-203ENST00000535915 F8VRH5 84 aa9.85□□□□□ -0.83
LDLR-203ENST00000535915 PPP1R17O96001 155 aa9.85□□□□□ -0.83
LDLR-203ENST00000535915 CD7P09564 240 aa9.85□□□□□ -0.83
LDLR-203ENST00000535915 C2orf66Q6UXQ4 117 aa9.84□□□□□ -0.83
LDLR-203ENST00000535915 NXPH4O95158 308 aa9.84□□□□□ -0.83
LDLR-203ENST00000535915 IGKV3-20P01619 116 aa9.84□□□□□ -0.83
LDLR-203ENST00000535915 HLA-DRB4P13762 266 aa9.84□□□□□ -0.83
LDLR-203ENST00000535915 HLA-DRB4X5D2U9 266 aa9.84□□□□□ -0.83
LDLR-203ENST00000535915 SORL1Q92673 2214 aa9.84□□□□□ -0.83
LDLR-203ENST00000535915 FXYD2P54710 66 aa9.83□□□□□ -0.84
LDLR-203ENST00000535915 JPT2Q9H910 190 aa9.83□□□□□ -0.84
LDLR-203ENST00000535915 TMEM89A2RUT3 159 aa9.83□□□□□ -0.84
LDLR-203ENST00000535915 J3QLI3 93 aa9.83□□□□□ -0.84
LDLR-203ENST00000535915 SNRPD3P62318 126 aaKnown RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms