RNA–Protein interactions for RNA: ENST00000534754.5

SORL1-213, Transcript of sortilin related receptor 1, humanhuman

TSL 3

Gene SORL1, Length 2,222 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-213ENST00000534754 RBAKDNA6NC62 111 aa6.83□□□□□ -1.32
SORL1-213ENST00000534754 RNF223E7ERA6 249 aa6.83□□□□□ -1.32
SORL1-213ENST00000534754 HOXA3O43365 443 aaPredicted RBP6.83□□□□□ -1.32
SORL1-213ENST00000534754 TRGV3P03979 118 aa6.83□□□□□ -1.32
SORL1-213ENST00000534754 FOXI1Q12951 378 aa6.83□□□□□ -1.32
SORL1-213ENST00000534754 C5orf64Q2M2E5 130 aa6.83□□□□□ -1.32
SORL1-213ENST00000534754 CFHR4Q92496 578 aa6.83□□□□□ -1.32
SORL1-213ENST00000534754 MRPL16Q9NX20 251 aaKnown RBP6.83□□□□□ -1.32
SORL1-213ENST00000534754 TEP1Q99973 2627 aaKnown RBP6.83□□□□□ -1.32
SORL1-213ENST00000534754 MORN3Q6PF18 240 aaPredicted RBP6.82□□□□□ -1.32
SORL1-213ENST00000534754 UFC1Q9Y3C8 167 aa6.82□□□□□ -1.32
SORL1-213ENST00000534754 TRAV26-2A0A0B4J265 109 aa6.82□□□□□ -1.32
SORL1-213ENST00000534754 IGKV3D-20A0A0C4DH25 116 aa6.82□□□□□ -1.32
SORL1-213ENST00000534754 TMEM238LA0A1B0GVL6 79 aa6.82□□□□□ -1.32
SORL1-213ENST00000534754 A6NJY4 79 aa6.82□□□□□ -1.32
SORL1-213ENST00000534754 IGHV3-23P01764 117 aa6.82□□□□□ -1.32
SORL1-213ENST00000534754 DSCR9P59020 149 aa6.82□□□□□ -1.32
SORL1-213ENST00000534754 LMO4P61968 165 aa6.82□□□□□ -1.32
SORL1-213ENST00000534754 KLRD1Q13241 179 aa6.82□□□□□ -1.32
SORL1-213ENST00000534754 DLX4Q92988 240 aaPredicted RBP6.82□□□□□ -1.32
SORL1-213ENST00000534754 TIMD4Q96H15 378 aa6.82□□□□□ -1.32
SORL1-213ENST00000534754 C20orf78Q9BR46 151 aa6.82□□□□□ -1.32
SORL1-213ENST00000534754 PGPEP1Q9NXJ5 209 aa6.82□□□□□ -1.32
SORL1-213ENST00000534754 DPM3Q9P2X0 92 aa6.82□□□□□ -1.32
SORL1-213ENST00000534754 ONECUT1Q9UBC0 465 aa6.82□□□□□ -1.32
SORL1-213ENST00000534754 PRAC2D3DTV9 90 aa6.81□□□□□ -1.32
SORL1-213ENST00000534754 CTSGP08311 255 aa6.81□□□□□ -1.32
SORL1-213ENST00000534754 SLC25A16P16260 332 aa6.81□□□□□ -1.32
SORL1-213ENST00000534754 CFAP126Q5VTH2 177 aa6.81□□□□□ -1.32
SORL1-213ENST00000534754 C8orf86Q6ZUL3 223 aa6.81□□□□□ -1.32
SORL1-213ENST00000534754 SYT8Q8NBV8 401 aa6.81□□□□□ -1.32
SORL1-213ENST00000534754 GEMIN7Q9H840 131 aaKnown RBP6.81□□□□□ -1.32
SORL1-213ENST00000534754 CYSLTR1Q9Y271 337 aa6.81□□□□□ -1.32
SORL1-213ENST00000534754 NSD1Q96L73 2696 aaPredicted RBP6.81□□□□□ -1.32
SORL1-213ENST00000534754 TRAV26-1A0A087WT03 109 aa6.81□□□□□ -1.32
SORL1-213ENST00000534754 LGALS1P09382 135 aaKnown RBP6.81□□□□□ -1.32
SORL1-213ENST00000534754 HES1Q14469 280 aa6.81□□□□□ -1.32
SORL1-213ENST00000534754 ORMDL2Q53FV1 153 aa6.81□□□□□ -1.32
SORL1-213ENST00000534754 ZNF418Q8TF45 676 aaPredicted RBP6.81□□□□□ -1.32
SORL1-213ENST00000534754 SCGB3A1Q96QR1 104 aa6.81□□□□□ -1.32
SORL1-213ENST00000534754 SMIM2Q9BVW6 85 aa6.81□□□□□ -1.32
SORL1-213ENST00000534754 C11orf21Q9P2W6 132 aa6.81□□□□□ -1.32
SORL1-213ENST00000534754 IGHV4-4A0A075B6R2 117 aa6.8□□□□□ -1.32
SORL1-213ENST00000534754 IGHV7-4-1A0A0J9YVY3 117 aa6.8□□□□□ -1.32
SORL1-213ENST00000534754 SPINK8P0C7L1 97 aa6.8□□□□□ -1.32
SORL1-213ENST00000534754 TMEM78Q5T7P6 136 aa6.8□□□□□ -1.32
SORL1-213ENST00000534754 LYRM7Q5U5X0 104 aa6.8□□□□□ -1.32
SORL1-213ENST00000534754 SPANXN1Q5VSR9 72 aa6.8□□□□□ -1.32
SORL1-213ENST00000534754 RNF182Q8N6D2 247 aa6.8□□□□□ -1.32
SORL1-213ENST00000534754 SLC50A1Q9BRV3 221 aa6.8□□□□□ -1.32
SORL1-213ENST00000534754 CDIP1Q9H305 208 aa6.8□□□□□ -1.32
SORL1-213ENST00000534754 MTORP42345 2549 aa6.8□□□□□ -1.32
SORL1-213ENST00000534754 MXRA5Q9NR99 2828 aa6.8□□□□□ -1.32
SORL1-213ENST00000534754 SMCPP49901 116 aaPredicted RBP6.8□□□□□ -1.32
SORL1-213ENST00000534754 CRYBA4P53673 196 aa6.8□□□□□ -1.32
SORL1-213ENST00000534754 NDPQ00604 133 aa6.8□□□□□ -1.32
SORL1-213ENST00000534754 LCNL1Q6ZST4 164 aa6.8□□□□□ -1.32
SORL1-213ENST00000534754 OR11H6Q8NGC7 330 aa6.8□□□□□ -1.32
SORL1-213ENST00000534754 TOMM6Q96B49 74 aa6.8□□□□□ -1.32
SORL1-213ENST00000534754 AGPAT4-IT1Q9H0P7 198 aa6.8□□□□□ -1.32
SORL1-213ENST00000534754 IGHV3OR16-8A0A075B7F1 116 aa6.79□□□□□ -1.32
SORL1-213ENST00000534754 LINC01549A6NIU2 74 aa6.79□□□□□ -1.32
SORL1-213ENST00000534754 ZFP36P26651 326 aaKnown RBP6.79□□□□□ -1.32
SORL1-213ENST00000534754 PSMB2P49721 201 aa6.79□□□□□ -1.32
SORL1-213ENST00000534754 KRTAP1-1Q07627 177 aa6.79□□□□□ -1.32
SORL1-213ENST00000534754 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.79□□□□□ -1.32
SORL1-213ENST00000534754 NEXN-AS1Q8NBZ9 246 aa6.79□□□□□ -1.32
SORL1-213ENST00000534754 PRADC1Q9BSG0 188 aa6.79□□□□□ -1.32
SORL1-213ENST00000534754 ZNF815PA8K554 130 aa6.78□□□□□ -1.32
SORL1-213ENST00000534754 UBE2D1P51668 147 aa6.78□□□□□ -1.32
SORL1-213ENST00000534754 SCGB1D4Q6XE38 83 aa6.78□□□□□ -1.32
SORL1-213ENST00000534754 NFE4Q86UQ8 179 aa6.78□□□□□ -1.32
SORL1-213ENST00000534754 LY6G5BQ8NDX9 201 aa6.78□□□□□ -1.32
SORL1-213ENST00000534754 KLK15Q9H2R5 256 aa6.78□□□□□ -1.32
SORL1-213ENST00000534754 VCX2Q9H322 139 aa6.78□□□□□ -1.32
SORL1-213ENST00000534754 IGHV3-35A0A0C4DH35 117 aa6.78□□□□□ -1.32
SORL1-213ENST00000534754 LOC107984156A0A0G2JMH3 177 aa6.78□□□□□ -1.32
SORL1-213ENST00000534754 BUB3O43684 328 aa6.78□□□□□ -1.32
SORL1-213ENST00000534754 TSPAN13O95857 204 aa6.78□□□□□ -1.32
SORL1-213ENST00000534754 IGHV4-31P0DP07 118 aa6.78□□□□□ -1.32
SORL1-213ENST00000534754 SRSF9Q13242 221 aaKnown RBP eCLIP6.78□□□□□ -1.32
SORL1-213ENST00000534754 ARL17AQ8IVW1 177 aa6.78□□□□□ -1.32
SORL1-213ENST00000534754 PPDPFLQ8WWR9 84 aa6.78□□□□□ -1.32
SORL1-213ENST00000534754 SMR3AQ99954 134 aa6.78□□□□□ -1.32
SORL1-213ENST00000534754 HIF1ANQ9NWT6 349 aa6.78□□□□□ -1.32
SORL1-213ENST00000534754 UBE2D3P61077 147 aa6.77□□□□□ -1.33
SORL1-213ENST00000534754 SUMO2P61956 95 aaKnown RBP6.77□□□□□ -1.33
SORL1-213ENST00000534754 UBE2D2P62837 147 aa6.77□□□□□ -1.33
SORL1-213ENST00000534754 Q6ZUT4 128 aa6.77□□□□□ -1.33
SORL1-213ENST00000534754 MRPL53Q96EL3 112 aaKnown RBP6.77□□□□□ -1.33
SORL1-213ENST00000534754 ZFHX3Q15911 3703 aa6.77□□□□□ -1.33
SORL1-213ENST00000534754 H3BVH4 76 aa6.77□□□□□ -1.33
SORL1-213ENST00000534754 MT-ATP8P03928 68 aa6.77□□□□□ -1.33
SORL1-213ENST00000534754 TEN1Q86WV5 123 aa6.77□□□□□ -1.33
SORL1-213ENST00000534754 WFDC12Q8WWY7 111 aa6.77□□□□□ -1.33
SORL1-213ENST00000534754 BAALCQ8WXS3 180 aa6.77□□□□□ -1.33
SORL1-213ENST00000534754 ZFAND3Q9H8U3 227 aa6.77□□□□□ -1.33
SORL1-213ENST00000534754 ODF3BA8MYP8 253 aa6.76□□□□□ -1.33
SORL1-213ENST00000534754 XGP55808 180 aa6.76□□□□□ -1.33
SORL1-213ENST00000534754 C9orf47Q6ZRZ4 202 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms