RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 HHLA3Q9XRX5 114 aa12.18□□□□□ -0.46
SMG1-203ENST00000532700 TNFRSF18Q9Y5U5 241 aa12.18□□□□□ -0.46
SMG1-203ENST00000532700 ICOSQ9Y6W8 199 aa12.18□□□□□ -0.46
SMG1-203ENST00000532700 NXPH4O95158 308 aa12.17□□□□□ -0.46
SMG1-203ENST00000532700 TAGLN2P37802 199 aaKnown RBP12.17□□□□□ -0.46
SMG1-203ENST00000532700 Q6ZRN7 208 aaPredicted RBP12.17□□□□□ -0.46
SMG1-203ENST00000532700 RASL10AQ92737 203 aa12.17□□□□□ -0.46
SMG1-203ENST00000532700 LRP1BQ9NZR2 4599 aa12.17□□□□□ -0.46
SMG1-203ENST00000532700 SCO2A0A1W2PP80 73 aa12.16□□□□□ -0.46
SMG1-203ENST00000532700 FABP5P3A8MUU1 101 aa12.16□□□□□ -0.46
SMG1-203ENST00000532700 LTAP01374 205 aa12.16□□□□□ -0.46
SMG1-203ENST00000532700 LINC00315P59091 139 aa12.16□□□□□ -0.46
SMG1-203ENST00000532700 KRTAP10-2P60368 255 aa12.16□□□□□ -0.46
SMG1-203ENST00000532700 LYPD5Q6UWN5 251 aa12.16□□□□□ -0.46
SMG1-203ENST00000532700 COX8CQ7Z4L0 72 aa12.16□□□□□ -0.46
SMG1-203ENST00000532700 SPXQ9BT56 116 aa12.16□□□□□ -0.46
SMG1-203ENST00000532700 HSPG2P98160 4391 aa12.16□□□□□ -0.46
SMG1-203ENST00000532700 K7EQD1 137 aa12.15□□□□□ -0.46
SMG1-203ENST00000532700 PDE6DO43924 150 aa12.15□□□□□ -0.46
SMG1-203ENST00000532700 BCL2P10415 239 aa12.15□□□□□ -0.46
SMG1-203ENST00000532700 MEF2BQ02080 365 aaPredicted RBP12.15□□□□□ -0.46
SMG1-203ENST00000532700 TRGV4A0A0C4DH28 118 aa12.14□□□□□ -0.47
SMG1-203ENST00000532700 FUSP35637 526 aaKnown RBP eCLIP12.14□□□□□ -0.47
SMG1-203ENST00000532700 TTC32Q5I0X7 151 aa12.14□□□□□ -0.47
SMG1-203ENST00000532700 C11orf52Q96A22 123 aa12.14□□□□□ -0.47
SMG1-203ENST00000532700 VAX2Q9UIW0 290 aa12.14□□□□□ -0.47
SMG1-203ENST00000532700 C16orf90A8MZG2 172 aa12.13□□□□□ -0.47
SMG1-203ENST00000532700 SIVA1O15304 175 aa12.13□□□□□ -0.47
SMG1-203ENST00000532700 GYPEP15421 78 aa12.13□□□□□ -0.47
SMG1-203ENST00000532700 FAM162BQ5T6X4 162 aa12.13□□□□□ -0.47
SMG1-203ENST00000532700 SPATA12Q7Z6I5 190 aa12.13□□□□□ -0.47
SMG1-203ENST00000532700 BAGE2Q86Y30 109 aa12.13□□□□□ -0.47
SMG1-203ENST00000532700 WFDC10BQ8IUB3 73 aa12.13□□□□□ -0.47
SMG1-203ENST00000532700 ZC2HC1AQ96GY0 325 aa12.13□□□□□ -0.47
SMG1-203ENST00000532700 ABCA13Q86UQ4 5058 aa12.12□□□□□ -0.47
SMG1-203ENST00000532700 DNAH5Q8TE73 4624 aa12.12□□□□□ -0.47
SMG1-203ENST00000532700 TRAV4A0A0B4J268 109 aa12.12□□□□□ -0.47
SMG1-203ENST00000532700 A0A1W2PPQ1 181 aa12.12□□□□□ -0.47
SMG1-203ENST00000532700 M0R2P5 195 aa12.12□□□□□ -0.47
SMG1-203ENST00000532700 RPL35P42766 123 aaKnown RBP12.12□□□□□ -0.47
SMG1-203ENST00000532700 LYPD6BQ8NI32 183 aa12.12□□□□□ -0.47
SMG1-203ENST00000532700 ORM1P02763 201 aa12.11□□□□□ -0.47
SMG1-203ENST00000532700 MRPL23Q16540 153 aaKnown RBP12.11□□□□□ -0.47
SMG1-203ENST00000532700 MED9Q9NWA0 146 aa12.11□□□□□ -0.47
SMG1-203ENST00000532700 SH2D1AO60880 128 aa12.1□□□□□ -0.47
SMG1-203ENST00000532700 CRIP1P50238 77 aa12.1□□□□□ -0.47
SMG1-203ENST00000532700 ZNF674Q2M3X9 581 aa12.1□□□□□ -0.47
SMG1-203ENST00000532700 NEGR1Q7Z3B1 354 aa12.1□□□□□ -0.47
SMG1-203ENST00000532700 OR4C5Q8NGB2 326 aa12.1□□□□□ -0.47
SMG1-203ENST00000532700 C9orf85Q96MD7 179 aa12.1□□□□□ -0.47
SMG1-203ENST00000532700 APOBP04114 4563 aaKnown RBP12.1□□□□□ -0.47
SMG1-203ENST00000532700 RBFOX3A6NFN3 312 aa12.09□□□□□ -0.47
SMG1-203ENST00000532700 B4DEV8 164 aa12.09□□□□□ -0.47
SMG1-203ENST00000532700 C9JCJ5 164 aa12.09□□□□□ -0.47
SMG1-203ENST00000532700 RNASE3P12724 160 aaKnown RBP12.09□□□□□ -0.47
SMG1-203ENST00000532700 GATA1P15976 413 aaPredicted RBP12.09□□□□□ -0.47
SMG1-203ENST00000532700 SLAQ13239 276 aa12.09□□□□□ -0.47
SMG1-203ENST00000532700 TEX261Q6UWH6 196 aa12.09□□□□□ -0.47
SMG1-203ENST00000532700 NHLRC2Q8NBF2 726 aa12.09□□□□□ -0.47
SMG1-203ENST00000532700 MLST8Q9BVC4 326 aa12.09□□□□□ -0.47
SMG1-203ENST00000532700 IGHV3-73A0A0B4J1V6 119 aa12.08□□□□□ -0.48
SMG1-203ENST00000532700 IGKV3D-20A0A0C4DH25 116 aa12.08□□□□□ -0.48
SMG1-203ENST00000532700 PGPEP1LA6NFU8 196 aa12.08□□□□□ -0.48
SMG1-203ENST00000532700 S100A4P26447 101 aaKnown RBP12.08□□□□□ -0.48
SMG1-203ENST00000532700 SRIP30626 198 aa12.08□□□□□ -0.48
SMG1-203ENST00000532700 DERL1Q9BUN8 251 aa12.08□□□□□ -0.48
SMG1-203ENST00000532700 KRBOX1C9JBD0 128 aa12.07□□□□□ -0.48
SMG1-203ENST00000532700 ASIPP42127 132 aa12.07□□□□□ -0.48
SMG1-203ENST00000532700 GNG4P50150 75 aa12.07□□□□□ -0.48
SMG1-203ENST00000532700 ZNF506Q5JVG8 444 aa12.07□□□□□ -0.48
SMG1-203ENST00000532700 CFAP126Q5VTH2 177 aa12.07□□□□□ -0.48
SMG1-203ENST00000532700 SMIM12Q96EX1 92 aa12.07□□□□□ -0.48
SMG1-203ENST00000532700 M0R036 132 aa12.06□□□□□ -0.48
SMG1-203ENST00000532700 RS1O15537 224 aa12.06□□□□□ -0.48
SMG1-203ENST00000532700 DNAH10OSP0CZ25 163 aa12.06□□□□□ -0.48
SMG1-203ENST00000532700 BTF3P20290 206 aaKnown RBP12.06□□□□□ -0.48
SMG1-203ENST00000532700 LINC01559Q495D7 138 aa12.06□□□□□ -0.48
SMG1-203ENST00000532700 ZNF876PQ49A33 203 aa12.06□□□□□ -0.48
SMG1-203ENST00000532700 CENPWQ5EE01 88 aa12.06□□□□□ -0.48
SMG1-203ENST00000532700 Q6ZSN1 163 aa12.06□□□□□ -0.48
SMG1-203ENST00000532700 RAB19A4D1S5 217 aa12.05□□□□□ -0.48
SMG1-203ENST00000532700 TMEM250H0YL14 139 aa12.05□□□□□ -0.48
SMG1-203ENST00000532700 DNLZQ5SXM8 178 aa12.05□□□□□ -0.48
SMG1-203ENST00000532700 SLC25A29Q8N8R3 303 aa12.05□□□□□ -0.48
SMG1-203ENST00000532700 PTH2Q96A98 100 aa12.05□□□□□ -0.48
SMG1-203ENST00000532700 EIF5A2Q9GZV4 153 aaKnown RBP12.05□□□□□ -0.48
SMG1-203ENST00000532700 BIN3Q9NQY0 253 aa12.05□□□□□ -0.48
SMG1-203ENST00000532700 Q9UF83 564 aa12.05□□□□□ -0.48
SMG1-203ENST00000532700 MGST1P10620 155 aaKnown RBP12.04□□□□□ -0.48
SMG1-203ENST00000532700 PRR27Q6MZM9 219 aa12.04□□□□□ -0.48
SMG1-203ENST00000532700 PCNPQ8WW12 178 aaKnown RBP12.04□□□□□ -0.48
SMG1-203ENST00000532700 JPT2Q9H910 190 aa12.04□□□□□ -0.48
SMG1-203ENST00000532700 IL36BQ9NZH7 164 aa12.04□□□□□ -0.48
SMG1-203ENST00000532700 NDUFS6O75380 124 aaKnown RBP12.03□□□□□ -0.48
SMG1-203ENST00000532700 CDK2AP2O75956 126 aa12.03□□□□□ -0.48
SMG1-203ENST00000532700 TOR2AQ5JU69 321 aa12.03□□□□□ -0.48
SMG1-203ENST00000532700 DAZAP1Q96EP5 407 aaKnown RBP12.03□□□□□ -0.48
SMG1-203ENST00000532700 FAM210AQ96ND0 272 aa12.03□□□□□ -0.48
SMG1-203ENST00000532700 TMSB15BA0A087X1C1 80 aa12.02□□□□□ -0.49
SMG1-203ENST00000532700 GRIFINA4D1Z8 144 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms