RNA–Protein interactions for RNA: ENST00000529611.5

CCDC90B-213, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2 BASIC

Gene CCDC90B, Length 1,986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-213ENST00000529611 CRLF1O75462 422 aa11.42□□□□□ -0.58
CCDC90B-213ENST00000529611 SCGB1D1O95968 90 aa11.42□□□□□ -0.58
CCDC90B-213ENST00000529611 PHLDA3Q9Y5J5 127 aa11.42□□□□□ -0.58
CCDC90B-213ENST00000529611 NIPBLQ6KC79 2804 aaeCLIP11.42□□□□□ -0.58
CCDC90B-213ENST00000529611 M0R381 172 aa11.41□□□□□ -0.58
CCDC90B-213ENST00000529611 GAS8-AS1O95177 125 aa11.41□□□□□ -0.58
CCDC90B-213ENST00000529611 NPYP01303 97 aa11.41□□□□□ -0.58
CCDC90B-213ENST00000529611 PMCHL1Q16048 86 aa11.41□□□□□ -0.58
CCDC90B-213ENST00000529611 SMIM15Q7Z3B0 74 aa11.41□□□□□ -0.58
CCDC90B-213ENST00000529611 IGHV1-24A0A0C4DH33 117 aa11.41□□□□□ -0.58
CCDC90B-213ENST00000529611 RBMY1BA6NDE4 496 aaKnown RBP11.41□□□□□ -0.58
CCDC90B-213ENST00000529611 RBMY1EA6NEQ0 496 aaKnown RBP11.41□□□□□ -0.58
CCDC90B-213ENST00000529611 PPBPP02775 128 aa11.41□□□□□ -0.58
CCDC90B-213ENST00000529611 CD7P09564 240 aa11.41□□□□□ -0.58
CCDC90B-213ENST00000529611 RBMY1DP0C7P1 496 aaKnown RBP11.41□□□□□ -0.58
CCDC90B-213ENST00000529611 MUC4Q99102 2169 aa11.4□□□□□ -0.58
CCDC90B-213ENST00000529611 FXYD7P58549 80 aa11.4□□□□□ -0.58
CCDC90B-213ENST00000529611 KRTDAPP60985 99 aa11.4□□□□□ -0.58
CCDC90B-213ENST00000529611 ODF3L2Q3SX64 289 aa11.4□□□□□ -0.58
CCDC90B-213ENST00000529611 PRSS3P2Q8NHM4 247 aa11.4□□□□□ -0.58
CCDC90B-213ENST00000529611 F8P00451 2351 aa11.4□□□□□ -0.59
CCDC90B-213ENST00000529611 LOC389332A0A1B0GUA5 103 aa11.39□□□□□ -0.59
CCDC90B-213ENST00000529611 CRXO43186 299 aaPredicted RBP11.39□□□□□ -0.59
CCDC90B-213ENST00000529611 IFI27P40305 119 aaPredicted RBP11.39□□□□□ -0.59
CCDC90B-213ENST00000529611 NDUFA11Q86Y39 141 aa11.39□□□□□ -0.59
CCDC90B-213ENST00000529611 AP5S1Q9NUS5 200 aa11.39□□□□□ -0.59
CCDC90B-213ENST00000529611 IGHV1OR15-1A0A075B7D0 117 aa11.39□□□□□ -0.59
CCDC90B-213ENST00000529611 SAP30O75446 220 aa11.39□□□□□ -0.59
CCDC90B-213ENST00000529611 NXPH4O95158 308 aa11.39□□□□□ -0.59
CCDC90B-213ENST00000529611 C3orf79P0CE67 100 aa11.39□□□□□ -0.59
CCDC90B-213ENST00000529611 RBMY1A1P0DJD3 496 aaKnown RBP11.39□□□□□ -0.59
CCDC90B-213ENST00000529611 RBMY1CP0DJD4 496 aa11.39□□□□□ -0.59
CCDC90B-213ENST00000529611 S100A12P80511 92 aa11.39□□□□□ -0.59
CCDC90B-213ENST00000529611 RBMY1FQ15415 496 aaKnown RBP11.39□□□□□ -0.59
CCDC90B-213ENST00000529611 FA2HQ7L5A8 372 aa11.39□□□□□ -0.59
CCDC90B-213ENST00000529611 IGHV3-16A0A0C4DH30 117 aa11.38□□□□□ -0.59
CCDC90B-213ENST00000529611 GATA1P15976 413 aaPredicted RBP11.38□□□□□ -0.59
CCDC90B-213ENST00000529611 Q8N1Y9 231 aa11.38□□□□□ -0.59
CCDC90B-213ENST00000529611 Q8N976 141 aa11.38□□□□□ -0.59
CCDC90B-213ENST00000529611 LAMTOR2Q9Y2Q5 125 aa11.38□□□□□ -0.59
CCDC90B-213ENST00000529611 TRAV26-2A0A0B4J265 109 aa11.37□□□□□ -0.59
CCDC90B-213ENST00000529611 TNFRSF6BO95407 300 aa11.37□□□□□ -0.59
CCDC90B-213ENST00000529611 C9orf85Q96MD7 179 aa11.37□□□□□ -0.59
CCDC90B-213ENST00000529611 IGLV1-51P01701 117 aa11.36□□□□□ -0.59
CCDC90B-213ENST00000529611 MDFICQ9P1T7 246 aa11.36□□□□□ -0.59
CCDC90B-213ENST00000529611 C14orf178Q8N769 122 aaPredicted RBP11.36□□□□□ -0.59
CCDC90B-213ENST00000529611 AP1S3Q96PC3 154 aa11.36□□□□□ -0.59
CCDC90B-213ENST00000529611 MAP1LC3AQ9H492 121 aa11.36□□□□□ -0.59
CCDC90B-213ENST00000529611 DPH3P1Q9H4G8 78 aa11.36□□□□□ -0.59
CCDC90B-213ENST00000529611 JMJD1CQ15652 2540 aa11.35□□□□□ -0.59
CCDC90B-213ENST00000529611 OR11H12B2RN74 326 aa11.35□□□□□ -0.59
CCDC90B-213ENST00000529611 LEPROTL1O95214 131 aa11.35□□□□□ -0.59
CCDC90B-213ENST00000529611 LINC00173Q6ZV60 143 aa11.35□□□□□ -0.59
CCDC90B-213ENST00000529611 ZNF664Q8N3J9 261 aa11.35□□□□□ -0.59
CCDC90B-213ENST00000529611 NRACQ8N912 160 aa11.35□□□□□ -0.59
CCDC90B-213ENST00000529611 CLUHP3Q96NS8 147 aa11.35□□□□□ -0.59
CCDC90B-213ENST00000529611 A0A096LNJ9 63 aa11.34□□□□□ -0.59
CCDC90B-213ENST00000529611 TEX43Q6ZNM6 134 aa11.34□□□□□ -0.59
CCDC90B-213ENST00000529611 OR2K2Q8NGT1 345 aa11.34□□□□□ -0.59
CCDC90B-213ENST00000529611 MRAP2Q96G30 205 aa11.34□□□□□ -0.59
CCDC90B-213ENST00000529611 PF4P02776 101 aa11.33□□□□□ -0.6
CCDC90B-213ENST00000529611 BTF3P20290 206 aaKnown RBP11.33□□□□□ -0.6
CCDC90B-213ENST00000529611 LINC00482Q8N8I6 264 aa11.33□□□□□ -0.6
CCDC90B-213ENST00000529611 PRO1933Q9H354 126 aa11.33□□□□□ -0.6
CCDC90B-213ENST00000529611 KIF25-AS1Q9Y6Z4 181 aa11.33□□□□□ -0.6
CCDC90B-213ENST00000529611 TRGV11A0A075B6L2 103 aa11.32□□□□□ -0.6
CCDC90B-213ENST00000529611 PKIAP61925 76 aa11.32□□□□□ -0.6
CCDC90B-213ENST00000529611 STHQ8IWL8 128 aa11.32□□□□□ -0.6
CCDC90B-213ENST00000529611 JPT2Q9H910 190 aa11.32□□□□□ -0.6
CCDC90B-213ENST00000529611 LINC01546A6NGU7 62 aa11.32□□□□□ -0.6
CCDC90B-213ENST00000529611 CBY3A6NI87 242 aa11.32□□□□□ -0.6
CCDC90B-213ENST00000529611 LINC00315P59091 139 aa11.32□□□□□ -0.6
CCDC90B-213ENST00000529611 TRPT1Q86TN4 253 aaKnown RBP11.32□□□□□ -0.6
CCDC90B-213ENST00000529611 DEFB125Q8N687 156 aa11.32□□□□□ -0.6
CCDC90B-213ENST00000529611 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.32□□□□□ -0.6
CCDC90B-213ENST00000529611 TMEM70Q9BUB7 260 aa11.32□□□□□ -0.6
CCDC90B-213ENST00000529611 NXT2Q9NPJ8 142 aaKnown RBP11.32□□□□□ -0.6
CCDC90B-213ENST00000529611 TENM1Q9UKZ4 2725 aa11.31□□□□□ -0.6
CCDC90B-213ENST00000529611 IGLV2-18A0A075B6J9 118 aa11.31□□□□□ -0.6
CCDC90B-213ENST00000529611 PRSS47A8MTI9 375 aa11.31□□□□□ -0.6
CCDC90B-213ENST00000529611 LINC00587B1AMM8 73 aa11.31□□□□□ -0.6
CCDC90B-213ENST00000529611 MGPP08493 103 aa11.31□□□□□ -0.6
CCDC90B-213ENST00000529611 BEAN1Q3B7T3 259 aa11.31□□□□□ -0.6
CCDC90B-213ENST00000529611 SPATA12Q7Z6I5 190 aa11.31□□□□□ -0.6
CCDC90B-213ENST00000529611 POM121L12Q8N7R1 296 aa11.31□□□□□ -0.6
CCDC90B-213ENST00000529611 TSTD3H0UI37 97 aa11.3□□□□□ -0.6
CCDC90B-213ENST00000529611 RASL10AQ92737 203 aa11.3□□□□□ -0.6
CCDC90B-213ENST00000529611 HSPB8Q9UJY1 196 aa11.3□□□□□ -0.6
CCDC90B-213ENST00000529611 INSP01308 110 aa11.3□□□□□ -0.6
CCDC90B-213ENST00000529611 HTN1P15515 57 aa11.3□□□□□ -0.6
CCDC90B-213ENST00000529611 Q8N8P6 123 aa11.3□□□□□ -0.6
CCDC90B-213ENST00000529611 FAM110AQ9BQ89 295 aa11.3□□□□□ -0.6
CCDC90B-213ENST00000529611 ATRQ13535 2644 aa11.29□□□□□ -0.6
CCDC90B-213ENST00000529611 SYS1-DBNDD2H3BUS1 97 aa11.29□□□□□ -0.6
CCDC90B-213ENST00000529611 HBDP02042 147 aa11.29□□□□□ -0.6
CCDC90B-213ENST00000529611 PRM2P04554 102 aa11.29□□□□□ -0.6
CCDC90B-213ENST00000529611 SMIM17P0DL12 118 aa11.29□□□□□ -0.6
CCDC90B-213ENST00000529611 CMC4P56277 68 aaPredicted RBP11.29□□□□□ -0.6
CCDC90B-213ENST00000529611 SYT8Q8NBV8 401 aa11.29□□□□□ -0.6
CCDC90B-213ENST00000529611 C20orf144Q9BQM9 153 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms