RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 TIMD4Q96H15 378 aa11.13□□□□□ -0.63
CAPN1-214ENST00000528165 IGF2-ASQ6U949 168 aa11.13□□□□□ -0.63
CAPN1-214ENST00000528165 Q6ZS46 218 aa11.13□□□□□ -0.63
CAPN1-214ENST00000528165 SLC25A29Q8N8R3 303 aa11.12□□□□□ -0.63
CAPN1-214ENST00000528165 COLQQ9Y215 455 aaPredicted RBP11.12□□□□□ -0.63
CAPN1-214ENST00000528165 TP53TG1Q9Y2A0 90 aa11.12□□□□□ -0.63
CAPN1-214ENST00000528165 MGAQ8IWI9 3026 aa11.12□□□□□ -0.63
CAPN1-214ENST00000528165 ATP6V0E1O15342 81 aa11.12□□□□□ -0.63
CAPN1-214ENST00000528165 ARL3P36405 182 aa11.12□□□□□ -0.63
CAPN1-214ENST00000528165 PMVKQ15126 192 aa11.12□□□□□ -0.63
CAPN1-214ENST00000528165 EEF1AKMT3Q96AZ1 226 aa11.12□□□□□ -0.63
CAPN1-214ENST00000528165 IGHV1-69DA0A0B4J2H0 117 aa11.11□□□□□ -0.63
CAPN1-214ENST00000528165 GAGE5Q13069 117 aa11.11□□□□□ -0.63
CAPN1-214ENST00000528165 GAGE6Q13070 117 aa11.11□□□□□ -0.63
CAPN1-214ENST00000528165 TMEM170BQ5T4T1 132 aa11.11□□□□□ -0.63
CAPN1-214ENST00000528165 SS18L2Q9UHA2 77 aa11.11□□□□□ -0.63
CAPN1-214ENST00000528165 CSMD1Q96PZ7 3565 aa11.11□□□□□ -0.63
CAPN1-214ENST00000528165 EP300Q09472 2414 aaPredicted RBP11.11□□□□□ -0.63
CAPN1-214ENST00000528165 SLC25A20O43772 301 aa11.11□□□□□ -0.63
CAPN1-214ENST00000528165 TSHBP01222 138 aa11.11□□□□□ -0.63
CAPN1-214ENST00000528165 C9orf139Q6ZV77 190 aa11.11□□□□□ -0.63
CAPN1-214ENST00000528165 ZFAND2AQ8N6M9 145 aa11.11□□□□□ -0.63
CAPN1-214ENST00000528165 ANXA2RQ3ZCQ2 193 aa11.1□□□□□ -0.63
CAPN1-214ENST00000528165 MINOS1Q5TGZ0 78 aa11.1□□□□□ -0.63
CAPN1-214ENST00000528165 OR10J6PQ8NGY7 276 aa11.1□□□□□ -0.63
CAPN1-214ENST00000528165 LINC00477Q96M19 166 aa11.1□□□□□ -0.63
CAPN1-214ENST00000528165 MINOS1-NBL1R4GNA1 71 aa11.1□□□□□ -0.63
CAPN1-214ENST00000528165 C9JAW5 83 aa11.1□□□□□ -0.63
CAPN1-214ENST00000528165 TSPEAR-AS2P59090 65 aa11.1□□□□□ -0.63
CAPN1-214ENST00000528165 GPHB5Q86YW7 130 aa11.1□□□□□ -0.63
CAPN1-214ENST00000528165 LINC01560Q8TB33 94 aa11.1□□□□□ -0.63
CAPN1-214ENST00000528165 RAX2Q96IS3 184 aa11.1□□□□□ -0.63
CAPN1-214ENST00000528165 C20orf173Q96LM9 149 aa11.1□□□□□ -0.63
CAPN1-214ENST00000528165 TRBV7-1A0A0A6YYK4 115 aa11.09□□□□□ -0.63
CAPN1-214ENST00000528165 IGIPA6NJ69 53 aa11.09□□□□□ -0.63
CAPN1-214ENST00000528165 CITED1Q99966 193 aa11.09□□□□□ -0.63
CAPN1-214ENST00000528165 U3KQE9 123 aa11.09□□□□□ -0.63
CAPN1-214ENST00000528165 FAM90A27PA6NNH2 459 aa11.08□□□□□ -0.63
CAPN1-214ENST00000528165 G3V318 75 aa11.08□□□□□ -0.63
CAPN1-214ENST00000528165 LGALS3P17931 250 aaKnown RBP11.08□□□□□ -0.63
CAPN1-214ENST00000528165 DEFB104AQ8WTQ1 72 aa11.08□□□□□ -0.63
CAPN1-214ENST00000528165 ITLN2Q8WWU7 325 aaPredicted RBP11.08□□□□□ -0.63
CAPN1-214ENST00000528165 MED14OSP0DP75 135 aa11.08□□□□□ -0.64
CAPN1-214ENST00000528165 DEFB123Q8N688 67 aa11.08□□□□□ -0.64
CAPN1-214ENST00000528165 TMEM141Q96I45 108 aa11.08□□□□□ -0.64
CAPN1-214ENST00000528165 LAMA5O15230 3695 aa11.08□□□□□ -0.64
CAPN1-214ENST00000528165 J3QQQ9 107 aa11.08□□□□□ -0.64
CAPN1-214ENST00000528165 SNCGO76070 127 aa11.08□□□□□ -0.64
CAPN1-214ENST00000528165 KLK9Q2XQG4 91 aa11.08□□□□□ -0.64
CAPN1-214ENST00000528165 KLK9Q9UKQ9 250 aa11.08□□□□□ -0.64
CAPN1-214ENST00000528165 ABCA4P78363 2273 aa11.07□□□□□ -0.64
CAPN1-214ENST00000528165 CACNA1BQ00975 2339 aa11.07□□□□□ -0.64
CAPN1-214ENST00000528165 GNRH2O43555 120 aa11.07□□□□□ -0.64
CAPN1-214ENST00000528165 SRD5A1P18405 259 aa11.07□□□□□ -0.64
CAPN1-214ENST00000528165 RNASE4P34096 147 aaKnown RBP11.07□□□□□ -0.64
CAPN1-214ENST00000528165 RPL39P62891 51 aaKnown RBP11.07□□□□□ -0.64
CAPN1-214ENST00000528165 GAGE2BQ13066 116 aa11.07□□□□□ -0.64
CAPN1-214ENST00000528165 GAGE2EQ4V326 116 aa11.07□□□□□ -0.64
CAPN1-214ENST00000528165 GAGE2DQ9UEU5 116 aa11.07□□□□□ -0.64
CAPN1-214ENST00000528165 CACNA1HO95180 2353 aa11.07□□□□□ -0.64
CAPN1-214ENST00000528165 M0QXV9 152 aa11.07□□□□□ -0.64
CAPN1-214ENST00000528165 C1orf122Q6ZSJ8 110 aa11.07□□□□□ -0.64
CAPN1-214ENST00000528165 TRPT1Q86TN4 253 aaKnown RBP11.07□□□□□ -0.64
CAPN1-214ENST00000528165 AJUBAQ96IF1 538 aa11.07□□□□□ -0.64
CAPN1-214ENST00000528165 A4D1N5 150 aa11.06□□□□□ -0.64
CAPN1-214ENST00000528165 B5MCH6 92 aa11.06□□□□□ -0.64
CAPN1-214ENST00000528165 OVOL1O14753 267 aa11.06□□□□□ -0.64
CAPN1-214ENST00000528165 TIMM17AQ99595 171 aa11.06□□□□□ -0.64
CAPN1-214ENST00000528165 H7C2G1 150 aa11.06□□□□□ -0.64
CAPN1-214ENST00000528165 CRIP2P52943 208 aaPredicted RBP11.06□□□□□ -0.64
CAPN1-214ENST00000528165 ZNRF2Q8NHG8 242 aa11.06□□□□□ -0.64
CAPN1-214ENST00000528165 BDP1A6H8Y1 2624 aa11.06□□□□□ -0.64
CAPN1-214ENST00000528165 RHODO00212 210 aa11.05□□□□□ -0.64
CAPN1-214ENST00000528165 RNASE3P12724 160 aaKnown RBP11.05□□□□□ -0.64
CAPN1-214ENST00000528165 RPL32P62910 135 aaKnown RBP11.05□□□□□ -0.64
CAPN1-214ENST00000528165 VCYO14598 125 aa11.05□□□□□ -0.64
CAPN1-214ENST00000528165 DEFB1P60022 68 aa11.05□□□□□ -0.64
CAPN1-214ENST00000528165 ACACAQ13085 2346 aa11.05□□□□□ -0.64
CAPN1-214ENST00000528165 POM121L12Q8N7R1 296 aa11.05□□□□□ -0.64
CAPN1-214ENST00000528165 AMELXQ99217 191 aa11.05□□□□□ -0.64
CAPN1-214ENST00000528165 IGHV4OR15-8A0A075B7B6 117 aa11.04□□□□□ -0.64
CAPN1-214ENST00000528165 A0A087WW49 117 aa11.04□□□□□ -0.64
CAPN1-214ENST00000528165 IGHV3-33P01772 117 aa11.04□□□□□ -0.64
CAPN1-214ENST00000528165 ZNF876PQ49A33 203 aa11.04□□□□□ -0.64
CAPN1-214ENST00000528165 NHLRC4P0CG21 123 aaPredicted RBP11.04□□□□□ -0.64
CAPN1-214ENST00000528165 POLR2KP53803 58 aaKnown RBP11.04□□□□□ -0.64
CAPN1-214ENST00000528165 Q8NA96 180 aa11.04□□□□□ -0.64
CAPN1-214ENST00000528165 Q1RN00 199 aa11.04□□□□□ -0.64
CAPN1-214ENST00000528165 GVINP1Q7Z2Y8 2422 aa11.03□□□□□ -0.64
CAPN1-214ENST00000528165 TRAV2A0A0B4J234 112 aa11.03□□□□□ -0.64
CAPN1-214ENST00000528165 F5H697 171 aa11.03□□□□□ -0.64
CAPN1-214ENST00000528165 NDUFV3P56181 108 aaKnown RBP11.03□□□□□ -0.64
CAPN1-214ENST00000528165 NTN5Q8WTR8 489 aaPredicted RBP11.03□□□□□ -0.64
CAPN1-214ENST00000528165 TMEM263Q8WUH6 116 aaKnown RBP11.03□□□□□ -0.64
CAPN1-214ENST00000528165 KIF25-AS1Q9Y6Z4 181 aa11.03□□□□□ -0.64
CAPN1-214ENST00000528165 OTOGLQ3ZCN5 2332 aa11.03□□□□□ -0.64
CAPN1-214ENST00000528165 P0DMU3 169 aa11.03□□□□□ -0.64
CAPN1-214ENST00000528165 FAM231AP0DMU4 169 aa11.03□□□□□ -0.64
CAPN1-214ENST00000528165 FAM231CP0DMU5 169 aa11.03□□□□□ -0.64
CAPN1-214ENST00000528165 LINC00315P59091 139 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms