RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 BLCAPP62952 87 aa13.95□□□□□ -0.18
SDC2-202ENST00000518385 LAGE3Q14657 143 aa13.95□□□□□ -0.18
SDC2-202ENST00000518385 MYO9AB2RTY4 2548 aa13.95□□□□□ -0.18
SDC2-202ENST00000518385 TRBV25-1A0A075B6N4 114 aa13.94□□□□□ -0.18
SDC2-202ENST00000518385 A0A087WX48 190 aa13.94□□□□□ -0.18
SDC2-202ENST00000518385 CLPSL1A2RUU4 121 aa13.94□□□□□ -0.18
SDC2-202ENST00000518385 E9PLD3 99 aa13.94□□□□□ -0.18
SDC2-202ENST00000518385 NDUFA4O00483 81 aa13.94□□□□□ -0.18
SDC2-202ENST00000518385 IGHV4-59P01825 116 aa13.94□□□□□ -0.18
SDC2-202ENST00000518385 ARL3P36405 182 aa13.94□□□□□ -0.18
SDC2-202ENST00000518385 CFHR3Q02985 330 aa13.94□□□□□ -0.18
SDC2-202ENST00000518385 PHLDA1Q8WV24 401 aaPredicted RBP13.94□□□□□ -0.18
SDC2-202ENST00000518385 CHTOPQ9Y3Y2 248 aaKnown RBP13.94□□□□□ -0.18
SDC2-202ENST00000518385 NOTCH2Q04721 2471 aa13.93□□□□□ -0.18
SDC2-202ENST00000518385 SMKR1H3BMG3 65 aa13.93□□□□□ -0.18
SDC2-202ENST00000518385 TMEM158Q8WZ71 300 aa13.93□□□□□ -0.18
SDC2-202ENST00000518385 LINC00527Q9UJ94 153 aa13.93□□□□□ -0.18
SDC2-202ENST00000518385 RAB37Q96AX2 223 aa13.92□□□□□ -0.18
SDC2-202ENST00000518385 CIDEAO60543 219 aa13.92□□□□□ -0.18
SDC2-202ENST00000518385 ZC2HC1BQ5TFG8 222 aa13.92□□□□□ -0.18
SDC2-202ENST00000518385 ZNF575Q86XF7 245 aa13.92□□□□□ -0.18
SDC2-202ENST00000518385 TMEM160Q9NX00 188 aa13.92□□□□□ -0.18
SDC2-202ENST00000518385 VPREB3Q9UKI3 123 aa13.92□□□□□ -0.18
SDC2-202ENST00000518385 PPP1R17O96001 155 aa13.91□□□□□ -0.18
SDC2-202ENST00000518385 PF4V1P10720 104 aa13.91□□□□□ -0.18
SDC2-202ENST00000518385 FXYD2P54710 66 aa13.91□□□□□ -0.18
SDC2-202ENST00000518385 ORMDL2Q53FV1 153 aa13.91□□□□□ -0.18
SDC2-202ENST00000518385 TMEM78Q5T7P6 136 aa13.91□□□□□ -0.18
SDC2-202ENST00000518385 FOXI2Q6ZQN5 318 aa13.91□□□□□ -0.18
SDC2-202ENST00000518385 C9orf47Q6ZRZ4 202 aa13.91□□□□□ -0.18
SDC2-202ENST00000518385 IGHV3-35A0A0C4DH35 117 aa13.9□□□□□ -0.18
SDC2-202ENST00000518385 A0A1B0GWB2 263 aa13.9□□□□□ -0.18
SDC2-202ENST00000518385 MED14OSP0DP75 135 aa13.9□□□□□ -0.18
SDC2-202ENST00000518385 Q8TAT8 98 aa13.9□□□□□ -0.18
SDC2-202ENST00000518385 C18orf15Q96N68 181 aa13.9□□□□□ -0.18
SDC2-202ENST00000518385 ACANP16112 2415 aa13.9□□□□□ -0.18
SDC2-202ENST00000518385 H7C1H1 209 aa13.89□□□□□ -0.19
SDC2-202ENST00000518385 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.89□□□□□ -0.19
SDC2-202ENST00000518385 NRACQ8N912 160 aa13.89□□□□□ -0.19
SDC2-202ENST00000518385 C20orf78Q9BR46 151 aa13.89□□□□□ -0.19
SDC2-202ENST00000518385 IGKV2D-26A0A0A0MRZ7 120 aa13.88□□□□□ -0.19
SDC2-202ENST00000518385 IGLL5B9A064 214 aa13.88□□□□□ -0.19
SDC2-202ENST00000518385 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.88□□□□□ -0.19
SDC2-202ENST00000518385 HOXA3O43365 443 aaPredicted RBP13.88□□□□□ -0.19
SDC2-202ENST00000518385 TLN2Q9Y4G6 2542 aa13.88□□□□□ -0.19
SDC2-202ENST00000518385 F8VRH5 84 aa13.88□□□□□ -0.19
SDC2-202ENST00000518385 M0R381 172 aa13.88□□□□□ -0.19
SDC2-202ENST00000518385 LY6G6DO95868 133 aa13.88□□□□□ -0.19
SDC2-202ENST00000518385 RIPPLY3P57055 190 aa13.88□□□□□ -0.19
SDC2-202ENST00000518385 Q6ZS46 218 aa13.88□□□□□ -0.19
SDC2-202ENST00000518385 SMR3AQ99954 134 aa13.88□□□□□ -0.19
SDC2-202ENST00000518385 ZFHX3Q15911 3703 aa13.87□□□□□ -0.19
SDC2-202ENST00000518385 PSMB8P28062 276 aa13.87□□□□□ -0.19
SDC2-202ENST00000518385 SAMD13Q5VXD3 122 aa13.87□□□□□ -0.19
SDC2-202ENST00000518385 ZNF479Q96JC4 524 aa13.87□□□□□ -0.19
SDC2-202ENST00000518385 SIGMAR1Q99720 223 aa13.87□□□□□ -0.19
SDC2-202ENST00000518385 KLK15Q9H2R5 256 aa13.87□□□□□ -0.19
SDC2-202ENST00000518385 MSRB1Q9NZV6 116 aa13.87□□□□□ -0.19
SDC2-202ENST00000518385 IGHV3OR16-8A0A075B7F1 116 aa13.86□□□□□ -0.19
SDC2-202ENST00000518385 IGKV3D-20A0A0C4DH25 116 aa13.86□□□□□ -0.19
SDC2-202ENST00000518385 TMEM238LA0A1B0GVL6 79 aa13.86□□□□□ -0.19
SDC2-202ENST00000518385 A6NJY4 79 aa13.86□□□□□ -0.19
SDC2-202ENST00000518385 FXYD7P58549 80 aa13.86□□□□□ -0.19
SDC2-202ENST00000518385 CD300EQ496F6 205 aaPredicted RBP13.86□□□□□ -0.19
SDC2-202ENST00000518385 GTSCR1Q86UQ5 136 aa13.86□□□□□ -0.19
SDC2-202ENST00000518385 TMEM86BQ8N661 226 aa13.86□□□□□ -0.19
SDC2-202ENST00000518385 NHP2Q9NX24 153 aaKnown RBP13.86□□□□□ -0.19
SDC2-202ENST00000518385 K7EMT4 169 aa13.85□□□□□ -0.19
SDC2-202ENST00000518385 C12orf74Q32Q52 190 aa13.85□□□□□ -0.19
SDC2-202ENST00000518385 GLMPQ8WWB7 406 aa13.85□□□□□ -0.19
SDC2-202ENST00000518385 SMIM2Q9BVW6 85 aa13.85□□□□□ -0.19
SDC2-202ENST00000518385 MRPL35Q9NZE8 188 aaKnown RBP13.85□□□□□ -0.19
SDC2-202ENST00000518385 IGHV7-4-1A0A0J9YVY3 117 aa13.84□□□□□ -0.19
SDC2-202ENST00000518385 TRBV7-9A0A0J9YWB2 115 aa13.84□□□□□ -0.19
SDC2-202ENST00000518385 RPL24P83731 157 aaKnown RBP13.84□□□□□ -0.19
SDC2-202ENST00000518385 RRN3P1Q2M238 152 aa13.84□□□□□ -0.19
SDC2-202ENST00000518385 LYRM7Q5U5X0 104 aa13.84□□□□□ -0.19
SDC2-202ENST00000518385 ATP6V0E2Q8NHE4 81 aa13.84□□□□□ -0.19
SDC2-202ENST00000518385 AGPAT4-IT1Q9H0P7 198 aa13.84□□□□□ -0.19
SDC2-202ENST00000518385 OR11H12B2RN74 326 aa13.83□□□□□ -0.19
SDC2-202ENST00000518385 ELANEP08246 267 aa13.83□□□□□ -0.19
SDC2-202ENST00000518385 SCGB2A2Q13296 93 aa13.83□□□□□ -0.19
SDC2-202ENST00000518385 PAPPA-AS1Q5QFB9 102 aa13.83□□□□□ -0.19
SDC2-202ENST00000518385 OR11H1Q8NG94 326 aa13.83□□□□□ -0.19
SDC2-202ENST00000518385 OR11H2Q8NH07 326 aa13.83□□□□□ -0.19
SDC2-202ENST00000518385 SPATA25Q9BR10 227 aa13.83□□□□□ -0.19
SDC2-202ENST00000518385 MXRA5Q9NR99 2828 aa13.83□□□□□ -0.2
SDC2-202ENST00000518385 OTOGQ6ZRI0 2925 aa13.83□□□□□ -0.2
SDC2-202ENST00000518385 TRBV7-3A0A075B6L6 115 aa13.83□□□□□ -0.2
SDC2-202ENST00000518385 RPL32P62910 135 aaKnown RBP13.83□□□□□ -0.2
SDC2-202ENST00000518385 SPANXN1Q5VSR9 72 aa13.83□□□□□ -0.2
SDC2-202ENST00000518385 GPHB5Q86YW7 130 aa13.83□□□□□ -0.2
SDC2-202ENST00000518385 WFDC3Q8IUB2 231 aa13.83□□□□□ -0.2
SDC2-202ENST00000518385 TOMM6Q96B49 74 aa13.83□□□□□ -0.2
SDC2-202ENST00000518385 LINC00477Q96M19 166 aa13.83□□□□□ -0.2
SDC2-202ENST00000518385 HIST1H4GQ99525 98 aa13.83□□□□□ -0.2
SDC2-202ENST00000518385 SPANXB1Q9NS25 103 aaPredicted RBP13.83□□□□□ -0.2
SDC2-202ENST00000518385 SONP18583 2426 aaKnown RBP13.82□□□□□ -0.2
SDC2-202ENST00000518385 MYMXA0A1B0GTQ4 84 aa13.82□□□□□ -0.2
SDC2-202ENST00000518385 TEX48A0A1B0GUV7 120 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms