RNA–Protein interactions for RNA: ENST00000517921.1

PABPC1-203, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 885 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-203ENST00000517921 MUC21A0A140T8X8 626 aa7.66□□□□□ -1.18
PABPC1-203ENST00000517921 CBY3A6NI87 242 aa7.66□□□□□ -1.18
PABPC1-203ENST00000517921 F2Z2F3 143 aa7.66□□□□□ -1.18
PABPC1-203ENST00000517921 SPRY2O43597 315 aa7.66□□□□□ -1.18
PABPC1-203ENST00000517921 RAB5AP20339 215 aa7.66□□□□□ -1.18
PABPC1-203ENST00000517921 OR10AG1Q8NH19 301 aa7.66□□□□□ -1.18
PABPC1-203ENST00000517921 MDFICQ9P1T7 246 aa7.66□□□□□ -1.18
PABPC1-203ENST00000517921 TIMM8BQ9Y5J9 83 aaPredicted RBP7.66□□□□□ -1.18
PABPC1-203ENST00000517921 NXPH4O95158 308 aa7.65□□□□□ -1.18
PABPC1-203ENST00000517921 HTN1P15515 57 aa7.65□□□□□ -1.18
PABPC1-203ENST00000517921 AZU1P20160 251 aa7.65□□□□□ -1.18
PABPC1-203ENST00000517921 HBBP68871 147 aa7.65□□□□□ -1.18
PABPC1-203ENST00000517921 ZNF415Q09FC8 603 aa7.65□□□□□ -1.18
PABPC1-203ENST00000517921 RIGQ13278 110 aa7.65□□□□□ -1.18
PABPC1-203ENST00000517921 DEFB135Q30KP9 77 aa7.65□□□□□ -1.18
PABPC1-203ENST00000517921 RASL11AQ6T310 242 aa7.65□□□□□ -1.18
PABPC1-203ENST00000517921 C11orf72Q8NBR9 251 aa7.65□□□□□ -1.18
PABPC1-203ENST00000517921 MRAPQ8TCY5 172 aa7.65□□□□□ -1.18
PABPC1-203ENST00000517921 RNASE8Q8TDE3 154 aaKnown RBP7.65□□□□□ -1.18
PABPC1-203ENST00000517921 BORCS7Q96B45 105 aa7.65□□□□□ -1.18
PABPC1-203ENST00000517921 TENM3Q9P273 2699 aa7.65□□□□□ -1.18
PABPC1-203ENST00000517921 IGHV4-4A0A075B6R2 117 aa7.64□□□□□ -1.19
PABPC1-203ENST00000517921 UBE2CO00762 179 aa7.64□□□□□ -1.19
PABPC1-203ENST00000517921 CACNG7P62955 275 aa7.64□□□□□ -1.19
PABPC1-203ENST00000517921 WDR73Q6P4I2 378 aa7.64□□□□□ -1.19
PABPC1-203ENST00000517921 TMEM136Q6ZRR5 245 aa7.64□□□□□ -1.19
PABPC1-203ENST00000517921 GATD1Q8NB37 220 aa7.64□□□□□ -1.19
PABPC1-203ENST00000517921 IL17DQ8TAD2 202 aa7.64□□□□□ -1.19
PABPC1-203ENST00000517921 TMEM263Q8WUH6 116 aaKnown RBP7.64□□□□□ -1.19
PABPC1-203ENST00000517921 A0A1B0GW15 77 aa7.63□□□□□ -1.19
PABPC1-203ENST00000517921 SNURFLB1AK76 121 aa7.63□□□□□ -1.19
PABPC1-203ENST00000517921 K7EIL1 84 aa7.63□□□□□ -1.19
PABPC1-203ENST00000517921 NTF3P20783 257 aa7.63□□□□□ -1.19
PABPC1-203ENST00000517921 RPS10P46783 165 aaKnown RBP7.63□□□□□ -1.19
PABPC1-203ENST00000517921 CAMPP49913 170 aa7.63□□□□□ -1.19
PABPC1-203ENST00000517921 SSTP61278 116 aa7.63□□□□□ -1.19
PABPC1-203ENST00000517921 COX19Q49B96 90 aa7.63□□□□□ -1.19
PABPC1-203ENST00000517921 SPANXN1Q5VSR9 72 aa7.63□□□□□ -1.19
PABPC1-203ENST00000517921 ZFP82Q8N141 532 aa7.63□□□□□ -1.19
PABPC1-203ENST00000517921 GNB1LQ9BYB4 327 aa7.63□□□□□ -1.19
PABPC1-203ENST00000517921 GSN-AS1Q9NRJ2 163 aa7.63□□□□□ -1.19
PABPC1-203ENST00000517921 MSRB1Q9NZV6 116 aa7.63□□□□□ -1.19
PABPC1-203ENST00000517921 TMA7Q9Y2S6 64 aaKnown RBP7.63□□□□□ -1.19
PABPC1-203ENST00000517921 PHLDA3Q9Y5J5 127 aa7.63□□□□□ -1.19
PABPC1-203ENST00000517921 X6R8D5 127 aa7.63□□□□□ -1.19
PABPC1-203ENST00000517921 PLAC8L1A1L4L8 177 aa7.62□□□□□ -1.19
PABPC1-203ENST00000517921 M0R381 172 aa7.62□□□□□ -1.19
PABPC1-203ENST00000517921 HLA-DQA1P01909 254 aa7.62□□□□□ -1.19
PABPC1-203ENST00000517921 MT-ND6P03923 174 aa7.62□□□□□ -1.19
PABPC1-203ENST00000517921 TWIST1Q15672 202 aa7.62□□□□□ -1.19
PABPC1-203ENST00000517921 RRN3P1Q2M238 152 aa7.62□□□□□ -1.19
PABPC1-203ENST00000517921 ZNF493Q6ZR52 646 aa7.62□□□□□ -1.19
PABPC1-203ENST00000517921 Q6ZWC4 215 aa7.62□□□□□ -1.19
PABPC1-203ENST00000517921 C16orf74Q96GX8 76 aa7.62□□□□□ -1.19
PABPC1-203ENST00000517921 RCHY1Q96PM5 261 aa7.62□□□□□ -1.19
PABPC1-203ENST00000517921 LOC105371267A0A1B0GV96 52 aa7.61□□□□□ -1.19
PABPC1-203ENST00000517921 PHOX2AO14813 284 aa7.61□□□□□ -1.19
PABPC1-203ENST00000517921 TRGC2P03986 189 aa7.61□□□□□ -1.19
PABPC1-203ENST00000517921 S100A8P05109 93 aa7.61□□□□□ -1.19
PABPC1-203ENST00000517921 RAB4BP61018 213 aa7.61□□□□□ -1.19
PABPC1-203ENST00000517921 RNF183Q96D59 192 aa7.61□□□□□ -1.19
PABPC1-203ENST00000517921 SPXQ9BT56 116 aa7.61□□□□□ -1.19
PABPC1-203ENST00000517921 MRPL18Q9H0U6 180 aaKnown RBP7.61□□□□□ -1.19
PABPC1-203ENST00000517921 TRAPPC1Q9Y5R8 145 aa7.61□□□□□ -1.19
PABPC1-203ENST00000517921 DNAH9Q9NYC9 4486 aa7.61□□□□□ -1.19
PABPC1-203ENST00000517921 SMIM9A6NGZ8 99 aa7.6□□□□□ -1.19
PABPC1-203ENST00000517921 M0R2P5 195 aa7.6□□□□□ -1.19
PABPC1-203ENST00000517921 FABP9Q0Z7S8 132 aa7.6□□□□□ -1.19
PABPC1-203ENST00000517921 SLAQ13239 276 aa7.6□□□□□ -1.19
PABPC1-203ENST00000517921 DEFB121Q5J5C9 76 aa7.6□□□□□ -1.19
PABPC1-203ENST00000517921 SYT8Q8NBV8 401 aa7.6□□□□□ -1.19
PABPC1-203ENST00000517921 OR11H2Q8NH07 326 aa7.6□□□□□ -1.19
PABPC1-203ENST00000517921 FRZBQ92765 325 aa7.6□□□□□ -1.19
PABPC1-203ENST00000517921 PTH2Q96A98 100 aa7.6□□□□□ -1.19
PABPC1-203ENST00000517921 AP1S3Q96PC3 154 aa7.6□□□□□ -1.19
PABPC1-203ENST00000517921 TMEM191AQ9H0A3 160 aa7.6□□□□□ -1.19
PABPC1-203ENST00000517921 HUWE1Q7Z6Z7 4374 aaKnown RBP7.6□□□□□ -1.19
PABPC1-203ENST00000517921 TRGC1P0CF51 173 aa7.59□□□□□ -1.19
PABPC1-203ENST00000517921 EVI2AP22794 236 aa7.59□□□□□ -1.19
PABPC1-203ENST00000517921 ZNF876PQ49A33 203 aa7.59□□□□□ -1.19
PABPC1-203ENST00000517921 PIK3CD-AS1Q5SR53 167 aa7.59□□□□□ -1.19
PABPC1-203ENST00000517921 AMN1Q8IY45 258 aa7.59□□□□□ -1.19
PABPC1-203ENST00000517921 JPT2Q9H910 190 aa7.59□□□□□ -1.19
PABPC1-203ENST00000517921 RETNQ9HD89 108 aa7.59□□□□□ -1.19
PABPC1-203ENST00000517921 MRPL16Q9NX20 251 aaKnown RBP7.59□□□□□ -1.19
PABPC1-203ENST00000517921 TP53TG1Q9Y2A0 90 aa7.59□□□□□ -1.19
PABPC1-203ENST00000517921 COL7A1Q02388 2944 aa7.58□□□□□ -1.2
PABPC1-203ENST00000517921 APCSP02743 223 aa7.58□□□□□ -1.2
PABPC1-203ENST00000517921 DAZ2Q13117 558 aaKnown RBP7.58□□□□□ -1.2
PABPC1-203ENST00000517921 KIAA1644Q3SXP7 199 aa7.58□□□□□ -1.2
PABPC1-203ENST00000517921 FAM104BQ5XKR9 115 aa7.58□□□□□ -1.2
PABPC1-203ENST00000517921 Q8NAQ8 132 aa7.58□□□□□ -1.2
PABPC1-203ENST00000517921 RNF185Q96GF1 192 aa7.58□□□□□ -1.2
PABPC1-203ENST00000517921 OVOL2Q9BRP0 275 aa7.58□□□□□ -1.2
PABPC1-203ENST00000517921 PRKDCP78527 4128 aaKnown RBP7.58□□□□□ -1.2
PABPC1-203ENST00000517921 TRGV1A0A0A0MS02 117 aa7.57□□□□□ -1.2
PABPC1-203ENST00000517921 IGHV4-28A0A0C4DH34 117 aa7.57□□□□□ -1.2
PABPC1-203ENST00000517921 C1orf196B1AJZ1 125 aa7.57□□□□□ -1.2
PABPC1-203ENST00000517921 MIFP14174 115 aa7.57□□□□□ -1.2
PABPC1-203ENST00000517921 LGALS9BQ3B8N2 356 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms