RNA–Protein interactions for RNA: ENST00000517181.1

RNU1-54P-201, Transcript of RNA, U1 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU1-54P, Length 120 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-54P-201ENST00000517181 DNAJC13O75165 2243 aa-1.31□□□□□ -2.62
RNU1-54P-201ENST00000517181 MFSD11O43934 449 aa-1.31□□□□□ -2.62
RNU1-54P-201ENST00000517181 EDF1O60869 148 aaKnown RBP-1.31□□□□□ -2.62
RNU1-54P-201ENST00000517181 SPRR1AP35321 89 aa-1.31□□□□□ -2.62
RNU1-54P-201ENST00000517181 GTF2A1P52655 376 aaPredicted RBP-1.31□□□□□ -2.62
RNU1-54P-201ENST00000517181 Q5VSD8 79 aa-1.31□□□□□ -2.62
RNU1-54P-201ENST00000517181 SMIM11BQ8TCY0 68 aa-1.31□□□□□ -2.62
RNU1-54P-201ENST00000517181 DGCR14Q96DF8 476 aaKnown RBP-1.31□□□□□ -2.62
RNU1-54P-201ENST00000517181 TMEM141Q96I45 108 aa-1.31□□□□□ -2.62
RNU1-54P-201ENST00000517181 PHB2Q99623 299 aa-1.31□□□□□ -2.62
RNU1-54P-201ENST00000517181 WDR97A6NE52 1622 aa-1.31□□□□□ -2.62
RNU1-54P-201ENST00000517181 BIVM-ERCC5R4GMW8 1640 aa-1.31□□□□□ -2.62
RNU1-54P-201ENST00000517181 PTPRGP23470 1445 aa-1.32□□□□□ -2.62
RNU1-54P-201ENST00000517181 PRKDCP78527 4128 aaKnown RBP-1.32□□□□□ -2.62
RNU1-54P-201ENST00000517181 LOC107986453A0A1B0GWG9 222 aa-1.32□□□□□ -2.62
RNU1-54P-201ENST00000517181 FABP2P12104 132 aa-1.32□□□□□ -2.62
RNU1-54P-201ENST00000517181 PPP1R2P41236 205 aa-1.32□□□□□ -2.62
RNU1-54P-201ENST00000517181 KLK9Q2XQG4 91 aa-1.32□□□□□ -2.62
RNU1-54P-201ENST00000517181 Q8IZM0 81 aa-1.32□□□□□ -2.62
RNU1-54P-201ENST00000517181 GINS3Q9BRX5 216 aa-1.32□□□□□ -2.62
RNU1-54P-201ENST00000517181 BET1LQ9NYM9 111 aa-1.32□□□□□ -2.62
RNU1-54P-201ENST00000517181 NUBP2Q9Y5Y2 271 aa-1.32□□□□□ -2.62
RNU1-54P-201ENST00000517181 MYH9P35579 1960 aaKnown RBP-1.32□□□□□ -2.62
RNU1-54P-201ENST00000517181 TECPR2O15040 1411 aa-1.32□□□□□ -2.62
RNU1-54P-201ENST00000517181 FAM135BQ49AJ0 1406 aa-1.32□□□□□ -2.62
RNU1-54P-201ENST00000517181 HELZP42694 1942 aaKnown RBP-1.32□□□□□ -2.62
RNU1-54P-201ENST00000517181 TRBV10-1A0A0K0K1A3 114 aa-1.33□□□□□ -2.62
RNU1-54P-201ENST00000517181 TRBV27A0A0K0K1C4 114 aa-1.33□□□□□ -2.62
RNU1-54P-201ENST00000517181 TRDV1A0A1B0GX56 115 aa-1.33□□□□□ -2.62
RNU1-54P-201ENST00000517181 SLC25A4P12235 298 aa-1.33□□□□□ -2.62
RNU1-54P-201ENST00000517181 SDC4P31431 198 aa-1.33□□□□□ -2.62
RNU1-54P-201ENST00000517181 PPP1R1CQ8WVI7 109 aa-1.33□□□□□ -2.62
RNU1-54P-201ENST00000517181 AP3S1Q92572 193 aa-1.33□□□□□ -2.62
RNU1-54P-201ENST00000517181 LAMTOR3Q9UHA4 124 aa-1.33□□□□□ -2.62
RNU1-54P-201ENST00000517181 LRP5O75197 1615 aa-1.33□□□□□ -2.62
RNU1-54P-201ENST00000517181 LAMA2P24043 3122 aaKnown RBP-1.34□□□□□ -2.62
RNU1-54P-201ENST00000517181 A0A087WTM6 91 aa-1.34□□□□□ -2.62
RNU1-54P-201ENST00000517181 OR2H2O95918 312 aa-1.34□□□□□ -2.62
RNU1-54P-201ENST00000517181 MORN4Q8NDC4 146 aa-1.34□□□□□ -2.62
RNU1-54P-201ENST00000517181 SMIM7Q9BQ49 75 aa-1.34□□□□□ -2.62
RNU1-54P-201ENST00000517181 KIDINS220Q9ULH0 1771 aa-1.34□□□□□ -2.62
RNU1-54P-201ENST00000517181 AKAP13Q12802 2813 aa-1.34□□□□□ -2.62
RNU1-54P-201ENST00000517181 TRAV17A0A0B4J275 112 aa-1.35□□□□□ -2.63
RNU1-54P-201ENST00000517181 LOC730098B7Z3J9 87 aa-1.35□□□□□ -2.63
RNU1-54P-201ENST00000517181 K7EQZ3 153 aa-1.35□□□□□ -2.63
RNU1-54P-201ENST00000517181 BLCAPP62952 87 aa-1.35□□□□□ -2.63
RNU1-54P-201ENST00000517181 NUP210Q8TEM1 1887 aaPredicted RBP-1.35□□□□□ -2.63
RNU1-54P-201ENST00000517181 PRRC2CQ9Y520 2896 aaKnown RBP-1.36□□□□□ -2.63
RNU1-54P-201ENST00000517181 VPS13DQ5THJ4 4388 aa-1.36□□□□□ -2.63
RNU1-54P-201ENST00000517181 CXorf51AA0A1B0GTR3 108 aa-1.36□□□□□ -2.63
RNU1-54P-201ENST00000517181 GABARAPH6UMI1 98 aa-1.36□□□□□ -2.63
RNU1-54P-201ENST00000517181 IFNA1P01562 189 aa-1.36□□□□□ -2.63
RNU1-54P-201ENST00000517181 APODP05090 189 aa-1.36□□□□□ -2.63
RNU1-54P-201ENST00000517181 ARF6P62330 175 aa-1.36□□□□□ -2.63
RNU1-54P-201ENST00000517181 REEP5Q00765 189 aa-1.36□□□□□ -2.63
RNU1-54P-201ENST00000517181 OR13C6PQ8NH95 151 aa-1.36□□□□□ -2.63
RNU1-54P-201ENST00000517181 PRO0255Q9UI72 69 aa-1.36□□□□□ -2.63
RNU1-54P-201ENST00000517181 TEP1Q99973 2627 aaKnown RBP-1.37□□□□□ -2.63
RNU1-54P-201ENST00000517181 TRAV16A0A0A6YYK6 109 aaPredicted RBP-1.37□□□□□ -2.63
RNU1-54P-201ENST00000517181 HSD11B1P28845 292 aa-1.37□□□□□ -2.63
RNU1-54P-201ENST00000517181 SDC2P34741 201 aa-1.37□□□□□ -2.63
RNU1-54P-201ENST00000517181 UNQ5815/PRO19632Q6UWF5 114 aa-1.37□□□□□ -2.63
RNU1-54P-201ENST00000517181 CROCCP2Q86T23 111 aa-1.37□□□□□ -2.63
RNU1-54P-201ENST00000517181 OR4S1Q8NGB4 309 aa-1.37□□□□□ -2.63
RNU1-54P-201ENST00000517181 OR51A4Q8NGJ6 313 aa-1.37□□□□□ -2.63
RNU1-54P-201ENST00000517181 CNFNQ9BYD5 112 aa-1.37□□□□□ -2.63
RNU1-54P-201ENST00000517181 TMEM242Q9NWH2 141 aa-1.37□□□□□ -2.63
RNU1-54P-201ENST00000517181 DNAH3Q8TD57 4116 aa-1.37□□□□□ -2.63
RNU1-54P-201ENST00000517181 LAMC1P11047 1609 aa-1.37□□□□□ -2.63
RNU1-54P-201ENST00000517181 PKHD1L1Q86WI1 4243 aa-1.38□□□□□ -2.63
RNU1-54P-201ENST00000517181 SPTBN4Q9H254 2564 aa-1.38□□□□□ -2.63
RNU1-54P-201ENST00000517181 ADCYAP1P18509 176 aa-1.38□□□□□ -2.63
RNU1-54P-201ENST00000517181 GNG3P63215 75 aa-1.38□□□□□ -2.63
RNU1-54P-201ENST00000517181 MYH3P11055 1940 aa-1.38□□□□□ -2.63
RNU1-54P-201ENST00000517181 MYH1P12882 1939 aa-1.38□□□□□ -2.63
RNU1-54P-201ENST00000517181 TRBV7-6A0A0J9YX20 115 aa-1.39□□□□□ -2.63
RNU1-54P-201ENST00000517181 ZNF670-ZNF695F2Z2N8 137 aa-1.39□□□□□ -2.63
RNU1-54P-201ENST00000517181 POLR2JP52435 117 aaKnown RBP-1.39□□□□□ -2.63
RNU1-54P-201ENST00000517181 FADDQ13158 208 aa-1.39□□□□□ -2.63
RNU1-54P-201ENST00000517181 LINC00305Q7Z4B0 112 aa-1.39□□□□□ -2.63
RNU1-54P-201ENST00000517181 MED11Q9P086 117 aa-1.39□□□□□ -2.63
RNU1-54P-201ENST00000517181 NBASA2RRP1 2371 aa-1.39□□□□□ -2.63
RNU1-54P-201ENST00000517181 TNRC18O15417 2968 aaPredicted RBP-1.39□□□□□ -2.63
RNU1-54P-201ENST00000517181 RYR2Q92736 4967 aa-1.39□□□□□ -2.63
RNU1-54P-201ENST00000517181 NIPBLQ6KC79 2804 aaeCLIP-1.4□□□□□ -2.63
RNU1-54P-201ENST00000517181 TRAV13-1A0A0B4J241 112 aa-1.4□□□□□ -2.63
RNU1-54P-201ENST00000517181 IGHV1-24A0A0C4DH33 117 aa-1.4□□□□□ -2.63
RNU1-54P-201ENST00000517181 RBAKDNA6NC62 111 aa-1.4□□□□□ -2.63
RNU1-54P-201ENST00000517181 TMEM210A6NLX4 147 aa-1.4□□□□□ -2.63
RNU1-54P-201ENST00000517181 APOC1P02654 83 aa-1.4□□□□□ -2.63
RNU1-54P-201ENST00000517181 S100A6P06703 90 aa-1.4□□□□□ -2.63
RNU1-54P-201ENST00000517181 SRP9P49458 86 aaKnown RBP-1.4□□□□□ -2.63
RNU1-54P-201ENST00000517181 Q6ZRX8 168 aa-1.4□□□□□ -2.63
RNU1-54P-201ENST00000517181 SSBP3-AS1Q7Z2R9 100 aa-1.4□□□□□ -2.63
RNU1-54P-201ENST00000517181 SMIM20Q8N5G0 67 aa-1.4□□□□□ -2.63
RNU1-54P-201ENST00000517181 TEX29Q8N6K0 151 aa-1.4□□□□□ -2.63
RNU1-54P-201ENST00000517181 OTOSQ8NHW6 89 aa-1.4□□□□□ -2.63
RNU1-54P-201ENST00000517181 PLXNA1Q9UIW2 1896 aa-1.4□□□□□ -2.63
RNU1-54P-201ENST00000517181 ZNF142P52746 1687 aaPredicted RBP-1.41□□□□□ -2.63
RNU1-54P-201ENST00000517181 ZNF815PA8K554 130 aa-1.41□□□□□ -2.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms