RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 H3BS24 57 aa5.78□□□□□ -1.48
PDLIM5-219ENST00000514743 CCL21O00585 134 aa5.78□□□□□ -1.48
PDLIM5-219ENST00000514743 PYYP10082 97 aa5.78□□□□□ -1.48
PDLIM5-219ENST00000514743 PRB3Q04118 309 aaPredicted RBP5.78□□□□□ -1.48
PDLIM5-219ENST00000514743 RITA1Q96K30 269 aa5.78□□□□□ -1.48
PDLIM5-219ENST00000514743 TEX22C9J3V5 150 aa5.78□□□□□ -1.48
PDLIM5-219ENST00000514743 NPYP01303 97 aa5.78□□□□□ -1.48
PDLIM5-219ENST00000514743 WT1-ASQ06250 92 aa5.78□□□□□ -1.48
PDLIM5-219ENST00000514743 MRPL55Q7Z7F7 128 aaKnown RBP5.78□□□□□ -1.48
PDLIM5-219ENST00000514743 TMEM167AQ8TBQ9 72 aa5.78□□□□□ -1.48
PDLIM5-219ENST00000514743 IGKV2D-26A0A0A0MRZ7 120 aa5.78□□□□□ -1.48
PDLIM5-219ENST00000514743 NDUFB3O43676 98 aa5.78□□□□□ -1.48
PDLIM5-219ENST00000514743 PLAUP00749 431 aa5.78□□□□□ -1.48
PDLIM5-219ENST00000514743 APELAP0DMC3 54 aa5.78□□□□□ -1.48
PDLIM5-219ENST00000514743 PRB4P10163 310 aaPredicted RBP5.78□□□□□ -1.48
PDLIM5-219ENST00000514743 EBI3Q14213 229 aa5.78□□□□□ -1.48
PDLIM5-219ENST00000514743 C10orf55Q5SWW7 151 aa5.78□□□□□ -1.48
PDLIM5-219ENST00000514743 MORN5Q5VZ52 161 aa5.78□□□□□ -1.48
PDLIM5-219ENST00000514743 PDPNQ86YL7 162 aa5.78□□□□□ -1.48
PDLIM5-219ENST00000514743 IMUPQ9GZP8 106 aa5.78□□□□□ -1.48
PDLIM5-219ENST00000514743 H3BTX0 84 aa5.77□□□□□ -1.49
PDLIM5-219ENST00000514743 IGHV1-8P0DP01 117 aa5.77□□□□□ -1.49
PDLIM5-219ENST00000514743 RUSC1-AS1Q66K80 236 aa5.77□□□□□ -1.49
PDLIM5-219ENST00000514743 C17orf77Q96MU5 243 aa5.77□□□□□ -1.49
PDLIM5-219ENST00000514743 AAMDCQ9H7C9 122 aa5.77□□□□□ -1.49
PDLIM5-219ENST00000514743 VPS13CQ709C8 3753 aa5.77□□□□□ -1.49
PDLIM5-219ENST00000514743 IGKV1D-37A0A075B6S9 117 aa5.77□□□□□ -1.49
PDLIM5-219ENST00000514743 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.77□□□□□ -1.49
PDLIM5-219ENST00000514743 DLX1P56177 255 aa5.77□□□□□ -1.49
PDLIM5-219ENST00000514743 NPC2P61916 151 aa5.77□□□□□ -1.49
PDLIM5-219ENST00000514743 DPH3P1Q9H4G8 78 aa5.77□□□□□ -1.49
PDLIM5-219ENST00000514743 MRPL36Q9P0J6 103 aaKnown RBP5.77□□□□□ -1.49
PDLIM5-219ENST00000514743 PTPRQQ9UMZ3 2332 aa5.77□□□□□ -1.49
PDLIM5-219ENST00000514743 MALRD1Q5VYJ5 2156 aa5.77□□□□□ -1.49
PDLIM5-219ENST00000514743 TLN1Q9Y490 2541 aaKnown RBP5.77□□□□□ -1.49
PDLIM5-219ENST00000514743 TCRAP04437 139 aa5.76□□□□□ -1.49
PDLIM5-219ENST00000514743 UBE2L3P68036 154 aaKnown RBP5.76□□□□□ -1.49
PDLIM5-219ENST00000514743 HBBP68871 147 aa5.76□□□□□ -1.49
PDLIM5-219ENST00000514743 ZNF355PQ9NSJ1 428 aa5.76□□□□□ -1.49
PDLIM5-219ENST00000514743 U3KQE9 123 aa5.76□□□□□ -1.49
PDLIM5-219ENST00000514743 FSTL3O95633 263 aa5.76□□□□□ -1.49
PDLIM5-219ENST00000514743 SLC25A16P16260 332 aa5.76□□□□□ -1.49
PDLIM5-219ENST00000514743 UBE2D3P61077 147 aa5.76□□□□□ -1.49
PDLIM5-219ENST00000514743 UBE2D2P62837 147 aa5.76□□□□□ -1.49
PDLIM5-219ENST00000514743 C11orf45Q8TAV5 145 aa5.76□□□□□ -1.49
PDLIM5-219ENST00000514743 FAM167A-AS1Q96KT0 104 aa5.76□□□□□ -1.49
PDLIM5-219ENST00000514743 SLC25A2Q9BXI2 301 aa5.76□□□□□ -1.49
PDLIM5-219ENST00000514743 PTPRZ1P23471 2315 aaPredicted RBP5.76□□□□□ -1.49
PDLIM5-219ENST00000514743 TEX49A0A1B0GTD5 131 aa5.76□□□□□ -1.49
PDLIM5-219ENST00000514743 H3BMM0 161 aa5.76□□□□□ -1.49
PDLIM5-219ENST00000514743 LGALS9O00182 355 aa5.76□□□□□ -1.49
PDLIM5-219ENST00000514743 IGLV1-47P01700 117 aa5.76□□□□□ -1.49
PDLIM5-219ENST00000514743 PVRIGQ6DKI7 326 aa5.76□□□□□ -1.49
PDLIM5-219ENST00000514743 WFDC3Q8IUB2 231 aa5.76□□□□□ -1.49
PDLIM5-219ENST00000514743 FAM168AQ92567 244 aa5.76□□□□□ -1.49
PDLIM5-219ENST00000514743 UBE2WQ96B02 151 aa5.76□□□□□ -1.49
PDLIM5-219ENST00000514743 TRGV9Q99603 122 aa5.76□□□□□ -1.49
PDLIM5-219ENST00000514743 DYNLRB1Q9NP97 96 aa5.76□□□□□ -1.49
PDLIM5-219ENST00000514743 ASH1LQ9NR48 2969 aaKnown RBP5.75□□□□□ -1.49
PDLIM5-219ENST00000514743 IGHV3-21A0A0B4J1V1 117 aa5.75□□□□□ -1.49
PDLIM5-219ENST00000514743 LYNX1G3V0Z9 82 aa5.75□□□□□ -1.49
PDLIM5-219ENST00000514743 ATOX1O00244 68 aa5.75□□□□□ -1.49
PDLIM5-219ENST00000514743 LYNX1P0DP58 116 aa5.75□□□□□ -1.49
PDLIM5-219ENST00000514743 HLA-DMBP28068 263 aa5.75□□□□□ -1.49
PDLIM5-219ENST00000514743 NSUN5P1Q3KNT7 163 aa5.75□□□□□ -1.49
PDLIM5-219ENST00000514743 PSMG4Q5JS54 123 aa5.75□□□□□ -1.49
PDLIM5-219ENST00000514743 PRSS3P2Q8NHM4 247 aa5.75□□□□□ -1.49
PDLIM5-219ENST00000514743 HIGD1CA8MV81 97 aa5.75□□□□□ -1.49
PDLIM5-219ENST00000514743 IGLV2-8P01709 118 aa5.75□□□□□ -1.49
PDLIM5-219ENST00000514743 PATE2Q6UY27 113 aa5.75□□□□□ -1.49
PDLIM5-219ENST00000514743 ATP5L2Q7Z4Y8 100 aa5.75□□□□□ -1.49
PDLIM5-219ENST00000514743 NEXN-AS1Q8NBZ9 246 aa5.75□□□□□ -1.49
PDLIM5-219ENST00000514743 LINC01560Q8TB33 94 aa5.75□□□□□ -1.49
PDLIM5-219ENST00000514743 IGHV3-72A0A0B4J1Y9 119 aa5.75□□□□□ -1.49
PDLIM5-219ENST00000514743 MRPS12O15235 138 aaKnown RBP5.75□□□□□ -1.49
PDLIM5-219ENST00000514743 FBXL19-AS1Q494R0 122 aa5.75□□□□□ -1.49
PDLIM5-219ENST00000514743 THAP8Q8NA92 274 aa5.75□□□□□ -1.49
PDLIM5-219ENST00000514743 IGF2BP2-AS1Q96M15 143 aa5.75□□□□□ -1.49
PDLIM5-219ENST00000514743 TMEM167BQ9NRX6 74 aa5.75□□□□□ -1.49
PDLIM5-219ENST00000514743 TRAV12-2A0A075B6T6 113 aa5.74□□□□□ -1.49
PDLIM5-219ENST00000514743 TRAV26-2A0A0B4J265 109 aa5.74□□□□□ -1.49
PDLIM5-219ENST00000514743 HOXB4P17483 251 aaPredicted RBP5.74□□□□□ -1.49
PDLIM5-219ENST00000514743 ERHP84090 104 aaKnown RBP5.74□□□□□ -1.49
PDLIM5-219ENST00000514743 DKK2Q9UBU2 259 aa5.74□□□□□ -1.49
PDLIM5-219ENST00000514743 NBASA2RRP1 2371 aa5.74□□□□□ -1.49
PDLIM5-219ENST00000514743 PSMB8P28062 276 aa5.74□□□□□ -1.49
PDLIM5-219ENST00000514743 C19orf71A6NCJ1 209 aa5.73□□□□□ -1.49
PDLIM5-219ENST00000514743 LCE2DQ5TA82 110 aaPredicted RBP5.73□□□□□ -1.49
PDLIM5-219ENST00000514743 Q9UF83 564 aa5.73□□□□□ -1.49
PDLIM5-219ENST00000514743 ITPR1Q14643 2758 aa5.73□□□□□ -1.49
PDLIM5-219ENST00000514743 PEX7O00628 323 aa5.73□□□□□ -1.49
PDLIM5-219ENST00000514743 Q71RC1 249 aaPredicted RBP5.73□□□□□ -1.49
PDLIM5-219ENST00000514743 TRBV7-3A0A075B6L6 115 aa5.73□□□□□ -1.49
PDLIM5-219ENST00000514743 IGHV1-3A0A0C4DH29 117 aa5.73□□□□□ -1.49
PDLIM5-219ENST00000514743 A0A1B0GXF2 115 aa5.73□□□□□ -1.49
PDLIM5-219ENST00000514743 BUB1B-PAK6H3BSN5 160 aa5.73□□□□□ -1.49
PDLIM5-219ENST00000514743 H3BT86 120 aa5.73□□□□□ -1.49
PDLIM5-219ENST00000514743 RPL13AP40429 203 aaKnown RBP5.73□□□□□ -1.49
PDLIM5-219ENST00000514743 RNF182Q8N6D2 247 aa5.73□□□□□ -1.49
PDLIM5-219ENST00000514743 IFI27L1Q96BM0 104 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms