RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 HIGD1AQ9Y241 93 aa2.53□□□□□ -2
HTT-210ENST00000512909 TP53TG1Q9Y2A0 90 aa2.53□□□□□ -2
HTT-210ENST00000512909 OBSCNQ5VST9 7968 aa2.53□□□□□ -2
HTT-210ENST00000512909 TRAV2A0A0B4J234 112 aa2.52□□□□□ -2.01
HTT-210ENST00000512909 LCE6AA0A183 80 aa2.52□□□□□ -2.01
HTT-210ENST00000512909 A6NDN8 102 aa2.52□□□□□ -2.01
HTT-210ENST00000512909 NUPR2A6NF83 97 aa2.52□□□□□ -2.01
HTT-210ENST00000512909 ZNF98A6NK75 572 aa2.52□□□□□ -2.01
HTT-210ENST00000512909 NDUFC2-KCTD14E9PQ53 114 aa2.52□□□□□ -2.01
HTT-210ENST00000512909 INMT-MINDY4F8WBC2 141 aa2.52□□□□□ -2.01
HTT-210ENST00000512909 BPY2O14599 106 aa2.52□□□□□ -2.01
HTT-210ENST00000512909 COX7A2P2O60397 106 aa2.52□□□□□ -2.01
HTT-210ENST00000512909 CST7O76096 145 aa2.52□□□□□ -2.01
HTT-210ENST00000512909 LINC00869P0C866 280 aa2.52□□□□□ -2.01
HTT-210ENST00000512909 RAB5AP20339 215 aa2.52□□□□□ -2.01
HTT-210ENST00000512909 HLA-DMBP28068 263 aa2.52□□□□□ -2.01
HTT-210ENST00000512909 DEFA1P59665 94 aa2.52□□□□□ -2.01
HTT-210ENST00000512909 DEFA3P59666 94 aa2.52□□□□□ -2.01
HTT-210ENST00000512909 PSG9Q00887 426 aa2.52□□□□□ -2.01
HTT-210ENST00000512909 HIST1H1AQ02539 215 aaPredicted RBP2.52□□□□□ -2.01
HTT-210ENST00000512909 BAXQ07812 192 aa2.52□□□□□ -2.01
HTT-210ENST00000512909 SLC38A11Q08AI6 406 aa2.52□□□□□ -2.01
HTT-210ENST00000512909 BSXQ3C1V8 233 aa2.52□□□□□ -2.01
HTT-210ENST00000512909 C1orf194Q5T5A4 169 aa2.52□□□□□ -2.01
HTT-210ENST00000512909 FAM78BQ5VT40 261 aa2.52□□□□□ -2.01
HTT-210ENST00000512909 C10orf113Q5VZT2 155 aa2.52□□□□□ -2.01
HTT-210ENST00000512909 NEGR1Q7Z3B1 354 aa2.52□□□□□ -2.01
HTT-210ENST00000512909 TMEM144Q7Z5S9 345 aa2.52□□□□□ -2.01
HTT-210ENST00000512909 ZNF709Q8N972 641 aa2.52□□□□□ -2.01
HTT-210ENST00000512909 MITD1Q8WV92 249 aa2.52□□□□□ -2.01
HTT-210ENST00000512909 LINC01587Q99440 93 aa2.52□□□□□ -2.01
HTT-210ENST00000512909 TIMM9Q9Y5J7 89 aa2.52□□□□□ -2.01
HTT-210ENST00000512909 RFNGQ9Y644 331 aa2.52□□□□□ -2.01
HTT-210ENST00000512909 DNHD1Q96M86 4753 aa2.51□□□□□ -2.01
HTT-210ENST00000512909 IGKV1D-37A0A075B6S9 117 aa2.51□□□□□ -2.01
HTT-210ENST00000512909 TRAV5A0A0B4J249 113 aa2.51□□□□□ -2.01
HTT-210ENST00000512909 H3BMM0 161 aa2.51□□□□□ -2.01
HTT-210ENST00000512909 K7EPK0 472 aa2.51□□□□□ -2.01
HTT-210ENST00000512909 DEDDO75618 318 aa2.51□□□□□ -2.01
HTT-210ENST00000512909 SPART-AS1P0CW21 52 aa2.51□□□□□ -2.01
HTT-210ENST00000512909 DEFB130BP0DP73 79 aa2.51□□□□□ -2.01
HTT-210ENST00000512909 DEFB130AP0DP74 79 aa2.51□□□□□ -2.01
HTT-210ENST00000512909 RPL7P18124 248 aaKnown RBP2.51□□□□□ -2.01
HTT-210ENST00000512909 FGF7P21781 194 aa2.51□□□□□ -2.01
HTT-210ENST00000512909 S100A11P31949 105 aa2.51□□□□□ -2.01
HTT-210ENST00000512909 RPL23P62829 140 aaKnown RBP2.51□□□□□ -2.01
HTT-210ENST00000512909 HBG1P69891 147 aa2.51□□□□□ -2.01
HTT-210ENST00000512909 HBG2P69892 147 aa2.51□□□□□ -2.01
HTT-210ENST00000512909 RBMY1FQ15415 496 aaKnown RBP2.51□□□□□ -2.01
HTT-210ENST00000512909 GDF5OSQ5U4N7 250 aa2.51□□□□□ -2.01
HTT-210ENST00000512909 MIC13Q5XKP0 118 aa2.51□□□□□ -2.01
HTT-210ENST00000512909 LINC00305Q7Z4B0 112 aa2.51□□□□□ -2.01
HTT-210ENST00000512909 STX12Q86Y82 276 aa2.51□□□□□ -2.01
HTT-210ENST00000512909 UBE2DNLQ8IWF7 75 aa2.51□□□□□ -2.01
HTT-210ENST00000512909 C15orf56Q8N910 161 aa2.51□□□□□ -2.01
HTT-210ENST00000512909 SCGB1C1Q8TD33 95 aa2.51□□□□□ -2.01
HTT-210ENST00000512909 DCANP1Q8TF63 244 aa2.51□□□□□ -2.01
HTT-210ENST00000512909 BLNKQ8WV28 456 aa2.51□□□□□ -2.01
HTT-210ENST00000512909 GPR82Q96P67 336 aa2.51□□□□□ -2.01
HTT-210ENST00000512909 CCDC32Q9BV29 185 aa2.51□□□□□ -2.01
HTT-210ENST00000512909 SCRT1Q9BWW7 348 aa2.51□□□□□ -2.01
HTT-210ENST00000512909 SLC25A31Q9H0C2 315 aa2.51□□□□□ -2.01
HTT-210ENST00000512909 SLC35B3Q9H1N7 401 aa2.51□□□□□ -2.01
HTT-210ENST00000512909 ARV1Q9H2C2 271 aa2.51□□□□□ -2.01
HTT-210ENST00000512909 ANK2Q01484 3957 aa2.5□□□□□ -2.01
HTT-210ENST00000512909 TRAV12-2A0A075B6T6 113 aa2.5□□□□□ -2.01
HTT-210ENST00000512909 IGKV1OR2-108A0A075B7D4 117 aa2.5□□□□□ -2.01
HTT-210ENST00000512909 DEFB131BA0A096LNP1 70 aa2.5□□□□□ -2.01
HTT-210ENST00000512909 SMIM26A0A096LP01 95 aa2.5□□□□□ -2.01
HTT-210ENST00000512909 TRAV10A0A0B4J240 114 aa2.5□□□□□ -2.01
HTT-210ENST00000512909 A0A0J9YX75 114 aa2.5□□□□□ -2.01
HTT-210ENST00000512909 UBE2L5PA0A1B0GUS4 154 aa2.5□□□□□ -2.01
HTT-210ENST00000512909 ZNF705FA8MVS1 300 aaPredicted RBP2.5□□□□□ -2.01
HTT-210ENST00000512909 H7C1H1 209 aa2.5□□□□□ -2.01
HTT-210ENST00000512909 M0R2N4 97 aa2.5□□□□□ -2.01
HTT-210ENST00000512909 M0R2Z0 102 aa2.5□□□□□ -2.01
HTT-210ENST00000512909 ISLRO14498 428 aa2.5□□□□□ -2.01
HTT-210ENST00000512909 UPK1BO75841 260 aa2.5□□□□□ -2.01
HTT-210ENST00000512909 IFNA5P01569 189 aa2.5□□□□□ -2.01
HTT-210ENST00000512909 PRM2P04554 102 aa2.5□□□□□ -2.01
HTT-210ENST00000512909 MIFP14174 115 aa2.5□□□□□ -2.01
HTT-210ENST00000512909 PSMB3P49720 205 aa2.5□□□□□ -2.01
HTT-210ENST00000512909 SULT1A1P50225 295 aa2.5□□□□□ -2.01
HTT-210ENST00000512909 TAS2R30P59541 319 aa2.5□□□□□ -2.01
HTT-210ENST00000512909 DAD1P61803 113 aa2.5□□□□□ -2.01
HTT-210ENST00000512909 IFITM3Q01628 133 aa2.5□□□□□ -2.01
HTT-210ENST00000512909 PSG3Q16557 428 aa2.5□□□□□ -2.01
HTT-210ENST00000512909 ATP6V1FQ16864 119 aa2.5□□□□□ -2.01
HTT-210ENST00000512909 SPINK13Q1W4C9 94 aa2.5□□□□□ -2.01
HTT-210ENST00000512909 RRN3P1Q2M238 152 aa2.5□□□□□ -2.01
HTT-210ENST00000512909 SPATA31B1PQ5VZV4 182 aa2.5□□□□□ -2.01
HTT-210ENST00000512909 TMEM14EPQ6UXP3 125 aa2.5□□□□□ -2.01
HTT-210ENST00000512909 PATE2Q6UY27 113 aa2.5□□□□□ -2.01
HTT-210ENST00000512909 FOXI2Q6ZQN5 318 aa2.5□□□□□ -2.01
HTT-210ENST00000512909 BPIFA4PQ86YQ2 179 aa2.5□□□□□ -2.01
HTT-210ENST00000512909 SHANK2-AS3Q9BTD1 123 aa2.5□□□□□ -2.01
HTT-210ENST00000512909 SMIM3Q9BZL3 60 aa2.5□□□□□ -2.01
HTT-210ENST00000512909 BATF3Q9NR55 127 aa2.5□□□□□ -2.01
HTT-210ENST00000512909 UQCC1Q9NVA1 299 aa2.5□□□□□ -2.01
HTT-210ENST00000512909 NOTCH1P46531 2555 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms