RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 KLLNB2CW77 178 aa13.48□□□□□ -0.25
CCHCR1-228ENST00000509552 PSMB8P28062 276 aa13.48□□□□□ -0.25
CCHCR1-228ENST00000509552 F8VRH5 84 aa13.48□□□□□ -0.25
CCHCR1-228ENST00000509552 SMIM13P0DJ93 91 aa13.48□□□□□ -0.25
CCHCR1-228ENST00000509552 DCANP1Q8TF63 244 aa13.48□□□□□ -0.25
CCHCR1-228ENST00000509552 SPG11Q96JI7 2443 aa13.47□□□□□ -0.25
CCHCR1-228ENST00000509552 NXPH4O95158 308 aa13.47□□□□□ -0.25
CCHCR1-228ENST00000509552 IGHV4-59P01825 116 aa13.47□□□□□ -0.25
CCHCR1-228ENST00000509552 EDN2P20800 178 aa13.47□□□□□ -0.25
CCHCR1-228ENST00000509552 DEFB112Q30KQ8 113 aa13.47□□□□□ -0.25
CCHCR1-228ENST00000509552 JMJD8Q96S16 334 aa13.47□□□□□ -0.25
CCHCR1-228ENST00000509552 CHTOPQ9Y3Y2 248 aaKnown RBP13.47□□□□□ -0.25
CCHCR1-228ENST00000509552 LINC01356Q8N9X3 169 aa13.46□□□□□ -0.25
CCHCR1-228ENST00000509552 COL12A1Q99715 3063 aa13.46□□□□□ -0.25
CCHCR1-228ENST00000509552 CDKN1BP46527 198 aa13.46□□□□□ -0.26
CCHCR1-228ENST00000509552 C2orf66Q6UXQ4 117 aa13.46□□□□□ -0.26
CCHCR1-228ENST00000509552 TMEM89A2RUT3 159 aa13.45□□□□□ -0.26
CCHCR1-228ENST00000509552 K7EP34 96 aa13.45□□□□□ -0.26
CCHCR1-228ENST00000509552 UFSP1Q6NVU6 142 aa13.45□□□□□ -0.26
CCHCR1-228ENST00000509552 POM121L12Q8N7R1 296 aa13.45□□□□□ -0.26
CCHCR1-228ENST00000509552 NAA38Q9BRA0 125 aaKnown RBP13.45□□□□□ -0.26
CCHCR1-228ENST00000509552 CSTL1Q9H114 145 aa13.45□□□□□ -0.26
CCHCR1-228ENST00000509552 DOPEY1Q5JWR5 2465 aa13.45□□□□□ -0.26
CCHCR1-228ENST00000509552 FXYD2P54710 66 aa13.45□□□□□ -0.26
CCHCR1-228ENST00000509552 OCIAD2Q56VL3 154 aa13.45□□□□□ -0.26
CCHCR1-228ENST00000509552 NEXN-AS1Q8NBZ9 246 aa13.45□□□□□ -0.26
CCHCR1-228ENST00000509552 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.44□□□□□ -0.261e-7■■■■■ 32.9
CCHCR1-228ENST00000509552 A0A1W2PPM0 123 aa13.44□□□□□ -0.26
CCHCR1-228ENST00000509552 RNF223E7ERA6 249 aa13.44□□□□□ -0.26
CCHCR1-228ENST00000509552 CD7P09564 240 aa13.44□□□□□ -0.26
CCHCR1-228ENST00000509552 CEND1Q8N111 149 aa13.44□□□□□ -0.26
CCHCR1-228ENST00000509552 NRGNQ92686 78 aa13.44□□□□□ -0.26
CCHCR1-228ENST00000509552 CFAP46Q8IYW2 2715 aa13.43□□□□□ -0.26
CCHCR1-228ENST00000509552 TRAV12-3A0A0B4J271 114 aa13.43□□□□□ -0.26
CCHCR1-228ENST00000509552 SNRPD3P62318 126 aaKnown RBP13.43□□□□□ -0.26
CCHCR1-228ENST00000509552 RNF151Q2KHN1 245 aa13.43□□□□□ -0.26
CCHCR1-228ENST00000509552 MAPKAPK5-AS1Q8N8E1 139 aa13.43□□□□□ -0.26
CCHCR1-228ENST00000509552 WFDC12Q8WWY7 111 aa13.43□□□□□ -0.26
CCHCR1-228ENST00000509552 TM2D2Q9BX73 214 aa13.43□□□□□ -0.26
CCHCR1-228ENST00000509552 KIF25-AS1Q9Y6Z4 181 aa13.43□□□□□ -0.26
CCHCR1-228ENST00000509552 TAL2Q16559 108 aa13.42□□□□□ -0.26
CCHCR1-228ENST00000509552 IGHV4OR15-8A0A075B7B6 117 aa13.42□□□□□ -0.26
CCHCR1-228ENST00000509552 A0A087WW49 117 aa13.42□□□□□ -0.26
CCHCR1-228ENST00000509552 J3QLI3 93 aa13.42□□□□□ -0.26
CCHCR1-228ENST00000509552 ZNF688P0C7X2 276 aa13.42□□□□□ -0.26
CCHCR1-228ENST00000509552 FABP2P12104 132 aa13.42□□□□□ -0.26
CCHCR1-228ENST00000509552 BAALCQ8WXS3 180 aa13.42□□□□□ -0.26
CCHCR1-228ENST00000509552 ODF3Q96PU9 254 aa13.42□□□□□ -0.26
CCHCR1-228ENST00000509552 OR11H12B2RN74 326 aa13.41□□□□□ -0.26
CCHCR1-228ENST00000509552 LINC00315P59091 139 aa13.41□□□□□ -0.26
CCHCR1-228ENST00000509552 RPL32P62910 135 aaKnown RBP13.41□□□□□ -0.26
CCHCR1-228ENST00000509552 SAMD5Q5TGI4 173 aa13.41□□□□□ -0.26
CCHCR1-228ENST00000509552 C10orf99Q6UWK7 81 aa13.41□□□□□ -0.26
CCHCR1-228ENST00000509552 OR11H1Q8NG94 326 aa13.41□□□□□ -0.26
CCHCR1-228ENST00000509552 OR11H2Q8NH07 326 aa13.41□□□□□ -0.26
CCHCR1-228ENST00000509552 SPCS1Q9Y6A9 102 aa13.41□□□□□ -0.26
CCHCR1-228ENST00000509552 OR5A1Q8NGJ0 315 aa13.41□□□□□ -0.26
CCHCR1-228ENST00000509552 LINC01549A6NIU2 74 aa13.4□□□□□ -0.26
CCHCR1-228ENST00000509552 CYSLTR1Q9Y271 337 aa13.4□□□□□ -0.26
CCHCR1-228ENST00000509552 MAP1AP78559 2803 aaPredicted RBP13.4□□□□□ -0.26
CCHCR1-228ENST00000509552 F5H697 171 aa13.4□□□□□ -0.26
CCHCR1-228ENST00000509552 K7ERU9 68 aa13.4□□□□□ -0.26
CCHCR1-228ENST00000509552 TGFAP01135 160 aa13.4□□□□□ -0.26
CCHCR1-228ENST00000509552 NHP2Q9NX24 153 aaKnown RBP13.4□□□□□ -0.26
CCHCR1-228ENST00000509552 A0A0J9YX75 114 aa13.39□□□□□ -0.27
CCHCR1-228ENST00000509552 PRSS29PA6NIE9 313 aa13.39□□□□□ -0.27
CCHCR1-228ENST00000509552 SUMO4Q6EEV6 95 aa13.39□□□□□ -0.27
CCHCR1-228ENST00000509552 JPT2Q9H910 190 aa13.39□□□□□ -0.27
CCHCR1-228ENST00000509552 MUC4Q99102 2169 aa13.39□□□□□ -0.27
CCHCR1-228ENST00000509552 PIEZO1Q92508 2521 aa13.39□□□□□ -0.27
CCHCR1-228ENST00000509552 PCP4P48539 62 aa13.39□□□□□ -0.27
CCHCR1-228ENST00000509552 NEGR1Q7Z3B1 354 aa13.39□□□□□ -0.27
CCHCR1-228ENST00000509552 HIST1H4GQ99525 98 aa13.39□□□□□ -0.27
CCHCR1-228ENST00000509552 FLNCQ14315 2725 aa13.39□□□□□ -0.27
CCHCR1-228ENST00000509552 CSPG4Q6UVK1 2322 aa13.39□□□□□ -0.27
CCHCR1-228ENST00000509552 A0A087WWL8 130 aa13.38□□□□□ -0.27
CCHCR1-228ENST00000509552 MYMXA0A1B0GTQ4 84 aa13.38□□□□□ -0.27
CCHCR1-228ENST00000509552 VCYO14598 125 aa13.38□□□□□ -0.27
CCHCR1-228ENST00000509552 KIR2DL4Q99706 377 aa13.38□□□□□ -0.27
CCHCR1-228ENST00000509552 K7EQG2 157 aa13.38□□□□□ -0.27
CCHCR1-228ENST00000509552 IGKV3-20P01619 116 aa13.38□□□□□ -0.27
CCHCR1-228ENST00000509552 SYT8Q8NBV8 401 aa13.38□□□□□ -0.27
CCHCR1-228ENST00000509552 USP9XQ93008 2570 aaPredicted RBP13.37□□□□□ -0.27
CCHCR1-228ENST00000509552 K7ERJ3 54 aa13.37□□□□□ -0.27
CCHCR1-228ENST00000509552 POLR2KP53803 58 aaKnown RBP13.37□□□□□ -0.27
CCHCR1-228ENST00000509552 SYNJ2BPP57105 145 aa13.37□□□□□ -0.27
CCHCR1-228ENST00000509552 DUSP14O95147 198 aaKnown RBP13.36□□□□□ -0.27
CCHCR1-228ENST00000509552 LGALS1P09382 135 aaKnown RBP13.36□□□□□ -0.27
CCHCR1-228ENST00000509552 VPS25Q9BRG1 176 aa13.36□□□□□ -0.27
CCHCR1-228ENST00000509552 VPREB3Q9UKI3 123 aa13.36□□□□□ -0.27
CCHCR1-228ENST00000509552 TP53TG1Q9Y2A0 90 aa13.36□□□□□ -0.27
CCHCR1-228ENST00000509552 CACNA1AO00555 2505 aa13.36□□□□□ -0.27
CCHCR1-228ENST00000509552 TRAV12-2A0A075B6T6 113 aa13.36□□□□□ -0.27
CCHCR1-228ENST00000509552 IGHV3-16A0A0C4DH30 117 aa13.36□□□□□ -0.27
CCHCR1-228ENST00000509552 E9PLD3 99 aa13.36□□□□□ -0.27
CCHCR1-228ENST00000509552 ELANEP08246 267 aa13.36□□□□□ -0.27
CCHCR1-228ENST00000509552 ZFP2Q6ZN57 461 aa13.36□□□□□ -0.27
CCHCR1-228ENST00000509552 PHLDA1Q8WV24 401 aaPredicted RBP13.36□□□□□ -0.27
CCHCR1-228ENST00000509552 C9orf85Q96MD7 179 aa13.36□□□□□ -0.27
CCHCR1-228ENST00000509552 CELSR2Q9HCU4 2923 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms