RNA–Protein interactions for RNA: ENST00000503842.5

PRDM2-213, Transcript of PR/SET domain 2, humanhuman

TSL 1 (best) BASIC

Gene PRDM2, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-213ENST00000503842 CTRLP40313 264 aa9.6□□□□□ -0.87
PRDM2-213ENST00000503842 RRN3P1Q2M238 152 aa9.6□□□□□ -0.87
PRDM2-213ENST00000503842 ZNF493Q6ZR52 646 aa9.6□□□□□ -0.87
PRDM2-213ENST00000503842 FER1L6-AS1Q8NA97 138 aa9.6□□□□□ -0.87
PRDM2-213ENST00000503842 OR11H2Q8NH07 326 aa9.6□□□□□ -0.87
PRDM2-213ENST00000503842 TMEM263Q8WUH6 116 aaKnown RBP9.6□□□□□ -0.87
PRDM2-213ENST00000503842 C9orf85Q96MD7 179 aa9.6□□□□□ -0.87
PRDM2-213ENST00000503842 AP5S1Q9NUS5 200 aa9.6□□□□□ -0.87
PRDM2-213ENST00000503842 PLAC8L1A1L4L8 177 aa9.59□□□□□ -0.87
PRDM2-213ENST00000503842 HIGD1CA8MV81 97 aa9.59□□□□□ -0.87
PRDM2-213ENST00000503842 PAX4O43316 350 aa9.59□□□□□ -0.87
PRDM2-213ENST00000503842 SCO1O75880 301 aa9.59□□□□□ -0.87
PRDM2-213ENST00000503842 OR5AL1P0C617 328 aa9.59□□□□□ -0.87
PRDM2-213ENST00000503842 ARMS2P0C7Q2 107 aa9.59□□□□□ -0.87
PRDM2-213ENST00000503842 S100A4P26447 101 aaKnown RBP9.59□□□□□ -0.87
PRDM2-213ENST00000503842 ZNF415Q09FC8 603 aa9.59□□□□□ -0.87
PRDM2-213ENST00000503842 NUP35Q8NFH5 326 aa9.59□□□□□ -0.87
PRDM2-213ENST00000503842 IL17DQ8TAD2 202 aa9.59□□□□□ -0.87
PRDM2-213ENST00000503842 C16orf74Q96GX8 76 aa9.59□□□□□ -0.87
PRDM2-213ENST00000503842 TM2D3Q9BRN9 247 aa9.59□□□□□ -0.87
PRDM2-213ENST00000503842 RETNQ9HD89 108 aa9.59□□□□□ -0.87
PRDM2-213ENST00000503842 SMCO4Q9NRQ5 59 aa9.59□□□□□ -0.87
PRDM2-213ENST00000503842 NAT8BQ9UHF3 227 aa9.59□□□□□ -0.87
PRDM2-213ENST00000503842 MUC4Q99102 2169 aa9.58□□□□□ -0.88
PRDM2-213ENST00000503842 FAM3BP58499 235 aaPredicted RBP9.58□□□□□ -0.88
PRDM2-213ENST00000503842 DEFA6Q01524 100 aa9.58□□□□□ -0.88
PRDM2-213ENST00000503842 TMEM88Q6PEY1 159 aa9.58□□□□□ -0.88
PRDM2-213ENST00000503842 LYZL1Q6UWQ5 148 aa9.58□□□□□ -0.88
PRDM2-213ENST00000503842 CBLN2Q8IUK8 224 aa9.58□□□□□ -0.88
PRDM2-213ENST00000503842 PGLYRP4Q96LB8 373 aa9.58□□□□□ -0.88
PRDM2-213ENST00000503842 CNFNQ9BYD5 112 aa9.58□□□□□ -0.88
PRDM2-213ENST00000503842 GSN-AS1Q9NRJ2 163 aa9.58□□□□□ -0.88
PRDM2-213ENST00000503842 DNAH9Q9NYC9 4486 aa9.58□□□□□ -0.88
PRDM2-213ENST00000503842 TRAV9-1A0A075B6T8 112 aa9.57□□□□□ -0.88
PRDM2-213ENST00000503842 F2Z2F3 143 aa9.57□□□□□ -0.88
PRDM2-213ENST00000503842 MIFP14174 115 aa9.57□□□□□ -0.88
PRDM2-213ENST00000503842 KCNIP4Q6PIL6 250 aa9.57□□□□□ -0.88
PRDM2-213ENST00000503842 Q8NAQ8 132 aa9.57□□□□□ -0.88
PRDM2-213ENST00000503842 YPEL4Q96NS1 127 aa9.57□□□□□ -0.88
PRDM2-213ENST00000503842 B9D2Q9BPU9 175 aa9.57□□□□□ -0.88
PRDM2-213ENST00000503842 SPATA25Q9BR10 227 aa9.57□□□□□ -0.88
PRDM2-213ENST00000503842 TPPP3Q9BW30 176 aa9.57□□□□□ -0.88
PRDM2-213ENST00000503842 TIMM8BQ9Y5J9 83 aaPredicted RBP9.57□□□□□ -0.88
PRDM2-213ENST00000503842 URGCP-MRPS24S4R325 110 aa9.57□□□□□ -0.88
PRDM2-213ENST00000503842 HUWE1Q7Z6Z7 4374 aaKnown RBP9.57□□□□□ -0.88
PRDM2-213ENST00000503842 IGHV4-28A0A0C4DH34 117 aa9.56□□□□□ -0.88
PRDM2-213ENST00000503842 NXPH4O95158 308 aa9.56□□□□□ -0.88
PRDM2-213ENST00000503842 S100PP25815 95 aa9.56□□□□□ -0.88
PRDM2-213ENST00000503842 WDR73Q6P4I2 378 aa9.56□□□□□ -0.88
PRDM2-213ENST00000503842 OR10AG1Q8NH19 301 aa9.56□□□□□ -0.88
PRDM2-213ENST00000503842 PTH2Q96A98 100 aa9.56□□□□□ -0.88
PRDM2-213ENST00000503842 SPXQ9BT56 116 aa9.56□□□□□ -0.88
PRDM2-213ENST00000503842 NBEAL2Q6ZNJ1 2754 aa9.56□□□□□ -0.88
PRDM2-213ENST00000503842 IGHV4-4A0A075B6R2 117 aa9.55□□□□□ -0.88
PRDM2-213ENST00000503842 MUC21A0A0G2JKD1 596 aa9.55□□□□□ -0.88
PRDM2-213ENST00000503842 MUC21A0A140T8X8 626 aa9.55□□□□□ -0.88
PRDM2-213ENST00000503842 A0A1B0GUT8 65 aa9.55□□□□□ -0.88
PRDM2-213ENST00000503842 CACNG7P62955 275 aa9.55□□□□□ -0.88
PRDM2-213ENST00000503842 DAZ2Q13117 558 aaKnown RBP9.55□□□□□ -0.88
PRDM2-213ENST00000503842 ELOBQ15370 118 aa9.55□□□□□ -0.88
PRDM2-213ENST00000503842 BTF3L4Q96K17 158 aa9.55□□□□□ -0.88
PRDM2-213ENST00000503842 PHLDA3Q9Y5J5 127 aa9.55□□□□□ -0.88
PRDM2-213ENST00000503842 A0A1B0GXF2 115 aa9.54□□□□□ -0.88
PRDM2-213ENST00000503842 SNURFLB1AK76 121 aa9.54□□□□□ -0.88
PRDM2-213ENST00000503842 M0R2P5 195 aa9.54□□□□□ -0.88
PRDM2-213ENST00000503842 SPINK4O60575 86 aa9.54□□□□□ -0.88
PRDM2-213ENST00000503842 ZFP82Q8N141 532 aa9.54□□□□□ -0.88
PRDM2-213ENST00000503842 TRBV24-1A0A075B6N3 115 aa9.53□□□□□ -0.88
PRDM2-213ENST00000503842 TGIF2-C20orf24A0A0A6YYL0 155 aa9.53□□□□□ -0.88
PRDM2-213ENST00000503842 RIGQ13278 110 aa9.53□□□□□ -0.88
PRDM2-213ENST00000503842 PIK3CD-AS1Q5SR53 167 aa9.53□□□□□ -0.88
PRDM2-213ENST00000503842 SPANXN1Q5VSR9 72 aa9.53□□□□□ -0.88
PRDM2-213ENST00000503842 MRPL54Q6P161 138 aaKnown RBP9.53□□□□□ -0.88
PRDM2-213ENST00000503842 ATP5L2Q7Z4Y8 100 aa9.53□□□□□ -0.88
PRDM2-213ENST00000503842 BORCS7Q96B45 105 aa9.53□□□□□ -0.88
PRDM2-213ENST00000503842 NOP10Q9NPE3 64 aaKnown RBP9.53□□□□□ -0.88
PRDM2-213ENST00000503842 PRKDCP78527 4128 aaKnown RBP9.52□□□□□ -0.88
PRDM2-213ENST00000503842 M0R381 172 aa9.52□□□□□ -0.89
PRDM2-213ENST00000503842 NTF3P20783 257 aa9.52□□□□□ -0.89
PRDM2-213ENST00000503842 LGALS9BQ3B8N2 356 aa9.52□□□□□ -0.89
PRDM2-213ENST00000503842 LINC00612Q8N6U2 182 aa9.52□□□□□ -0.89
PRDM2-213ENST00000503842 SYT8Q8NBV8 401 aa9.52□□□□□ -0.89
PRDM2-213ENST00000503842 RASL10AQ92737 203 aa9.52□□□□□ -0.89
PRDM2-213ENST00000503842 C11orf68Q9H3H3 251 aaKnown RBP9.52□□□□□ -0.89
PRDM2-213ENST00000503842 MRPL16Q9NX20 251 aaKnown RBP9.52□□□□□ -0.89
PRDM2-213ENST00000503842 MSRB1Q9NZV6 116 aa9.52□□□□□ -0.89
PRDM2-213ENST00000503842 A0A1B0GW15 77 aa9.51□□□□□ -0.89
PRDM2-213ENST00000503842 DEFB4AO15263 64 aa9.51□□□□□ -0.89
PRDM2-213ENST00000503842 EMP1P54849 157 aa9.51□□□□□ -0.89
PRDM2-213ENST00000503842 SSTP61278 116 aa9.51□□□□□ -0.89
PRDM2-213ENST00000503842 HBBP68871 147 aa9.51□□□□□ -0.89
PRDM2-213ENST00000503842 TWIST1Q15672 202 aa9.51□□□□□ -0.89
PRDM2-213ENST00000503842 ZNF876PQ49A33 203 aa9.51□□□□□ -0.89
PRDM2-213ENST00000503842 Q6ZTI0 123 aa9.51□□□□□ -0.89
PRDM2-213ENST00000503842 NDUFAF3Q9BU61 184 aa9.51□□□□□ -0.89
PRDM2-213ENST00000503842 ZMAT4Q9H898 229 aa9.51□□□□□ -0.89
PRDM2-213ENST00000503842 TENM3Q9P273 2699 aa9.5□□□□□ -0.89
PRDM2-213ENST00000503842 TRGV1A0A0A0MS02 117 aa9.5□□□□□ -0.89
PRDM2-213ENST00000503842 COLCA2A8K830 154 aa9.5□□□□□ -0.89
PRDM2-213ENST00000503842 LYRM9A8MSI8 78 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms