RNA–Protein interactions for RNA: ENST00000498614.5

COL6A1-206, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL6A1, Length 2,358 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-206ENST00000498614 SIGMAR1Q99720 223 aa12.45□□□□□ -0.42
COL6A1-206ENST00000498614 AGRNO00468 2067 aa12.45□□□□□ -0.42
COL6A1-206ENST00000498614 IGHV1-69DA0A0B4J2H0 117 aa12.45□□□□□ -0.42
COL6A1-206ENST00000498614 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.45□□□□□ -0.42
COL6A1-206ENST00000498614 H3BVH4 76 aa12.45□□□□□ -0.42
COL6A1-206ENST00000498614 IGHV1-69P01742 117 aa12.45□□□□□ -0.42
COL6A1-206ENST00000498614 SMAGPQ0VAQ4 97 aa12.45□□□□□ -0.42
COL6A1-206ENST00000498614 ETDBQ3ZM63 59 aa12.45□□□□□ -0.42
COL6A1-206ENST00000498614 KLK15Q9H2R5 256 aa12.45□□□□□ -0.42
COL6A1-206ENST00000498614 ITPR2Q14571 2701 aa12.45□□□□□ -0.42
COL6A1-206ENST00000498614 IGHV4-4A0A075B6R2 117 aa12.44□□□□□ -0.42
COL6A1-206ENST00000498614 H7C1H1 209 aa12.44□□□□□ -0.42
COL6A1-206ENST00000498614 RRN3P1Q2M238 152 aa12.44□□□□□ -0.42
COL6A1-206ENST00000498614 NAV2Q8IVL1 2488 aa12.44□□□□□ -0.42
COL6A1-206ENST00000498614 GAGE12HA6NDE8 117 aa12.44□□□□□ -0.42
COL6A1-206ENST00000498614 F8VRH5 84 aa12.44□□□□□ -0.42
COL6A1-206ENST00000498614 SPRY2O43597 315 aa12.44□□□□□ -0.42
COL6A1-206ENST00000498614 ATP5J2P56134 94 aa12.44□□□□□ -0.42
COL6A1-206ENST00000498614 LY6EQ16553 131 aa12.44□□□□□ -0.42
COL6A1-206ENST00000498614 CD300EQ496F6 205 aaPredicted RBP12.44□□□□□ -0.42
COL6A1-206ENST00000498614 PRR9Q5T870 116 aa12.44□□□□□ -0.42
COL6A1-206ENST00000498614 SMIM2Q9BVW6 85 aa12.44□□□□□ -0.42
COL6A1-206ENST00000498614 SPAG8Q99932 426 aaPredicted RBP12.43□□□□□ -0.42
COL6A1-206ENST00000498614 TRBV12-3P01733 135 aa12.43□□□□□ -0.42
COL6A1-206ENST00000498614 IGHV4-38-2P0DP08 117 aa12.43□□□□□ -0.42
COL6A1-206ENST00000498614 C19orf54Q5BKX5 351 aa12.43□□□□□ -0.42
COL6A1-206ENST00000498614 C9orf47Q6ZRZ4 202 aa12.43□□□□□ -0.42
COL6A1-206ENST00000498614 PIMREGQ9BSJ6 248 aa12.43□□□□□ -0.42
COL6A1-206ENST00000498614 U3KQE9 123 aa12.43□□□□□ -0.42
COL6A1-206ENST00000498614 TRAV12-1A0A0B4J245 112 aa12.42□□□□□ -0.42
COL6A1-206ENST00000498614 MYMXA0A1B0GTQ4 84 aa12.42□□□□□ -0.42
COL6A1-206ENST00000498614 IGF1P05019 195 aa12.42□□□□□ -0.42
COL6A1-206ENST00000498614 LCNL1Q6ZST4 164 aa12.42□□□□□ -0.42
COL6A1-206ENST00000498614 PRO0461Q9UI25 63 aa12.42□□□□□ -0.42
COL6A1-206ENST00000498614 CHTOPQ9Y3Y2 248 aaKnown RBP12.42□□□□□ -0.42
COL6A1-206ENST00000498614 OR11H12B2RN74 326 aa12.42□□□□□ -0.42
COL6A1-206ENST00000498614 ARL3P36405 182 aa12.42□□□□□ -0.42
COL6A1-206ENST00000498614 GAGE13Q4V321 117 aa12.42□□□□□ -0.42
COL6A1-206ENST00000498614 OR11H1Q8NG94 326 aa12.42□□□□□ -0.42
COL6A1-206ENST00000498614 OR11H2Q8NH07 326 aa12.42□□□□□ -0.42
COL6A1-206ENST00000498614 MRAP2Q96G30 205 aa12.42□□□□□ -0.42
COL6A1-206ENST00000498614 C16orf92Q96LL3 132 aa12.42□□□□□ -0.42
COL6A1-206ENST00000498614 SCGB3A1Q96QR1 104 aa12.42□□□□□ -0.42
COL6A1-206ENST00000498614 A0A1B0GWB2 263 aa12.41□□□□□ -0.42
COL6A1-206ENST00000498614 FAM223BA6NKX1 122 aa12.41□□□□□ -0.42
COL6A1-206ENST00000498614 J3KRW8 73 aa12.41□□□□□ -0.42
COL6A1-206ENST00000498614 CIDEAO60543 219 aa12.41□□□□□ -0.42
COL6A1-206ENST00000498614 FAM223AQ8IWN6 122 aa12.41□□□□□ -0.42
COL6A1-206ENST00000498614 MRPL53Q96EL3 112 aaKnown RBP12.41□□□□□ -0.42
COL6A1-206ENST00000498614 CYSLTR1Q9Y271 337 aa12.41□□□□□ -0.42
COL6A1-206ENST00000498614 UNQ9165/PRO28630Q6UXU0 137 aa12.41□□□□□ -0.42
COL6A1-206ENST00000498614 J3QR89 54 aa12.4□□□□□ -0.42
COL6A1-206ENST00000498614 SCGB1A1P11684 91 aa12.4□□□□□ -0.42
COL6A1-206ENST00000498614 INSL3P51460 131 aa12.4□□□□□ -0.42
COL6A1-206ENST00000498614 MORN3Q6PF18 240 aaPredicted RBP12.4□□□□□ -0.42
COL6A1-206ENST00000498614 NEXN-AS1Q8NBZ9 246 aa12.4□□□□□ -0.42
COL6A1-206ENST00000498614 RASL10AQ92737 203 aa12.4□□□□□ -0.42
COL6A1-206ENST00000498614 TOMM6Q96B49 74 aa12.4□□□□□ -0.42
COL6A1-206ENST00000498614 LINC01619G3V211 115 aa12.4□□□□□ -0.43
COL6A1-206ENST00000498614 LGALS1P09382 135 aaKnown RBP12.4□□□□□ -0.43
COL6A1-206ENST00000498614 RPL39LQ96EH5 51 aaKnown RBP12.4□□□□□ -0.43
COL6A1-206ENST00000498614 C20orf173Q96LM9 149 aa12.4□□□□□ -0.43
COL6A1-206ENST00000498614 HIF1ANQ9NWT6 349 aa12.4□□□□□ -0.43
COL6A1-206ENST00000498614 CCDC168Q8NDH2 2452 aa12.4□□□□□ -0.43
COL6A1-206ENST00000498614 ZANQ9Y493 2812 aa12.39□□□□□ -0.43
COL6A1-206ENST00000498614 M0R381 172 aa12.39□□□□□ -0.43
COL6A1-206ENST00000498614 IGHV3-11P01762 117 aa12.39□□□□□ -0.43
COL6A1-206ENST00000498614 C10orf105Q8TEF2 133 aa12.39□□□□□ -0.43
COL6A1-206ENST00000498614 GLMPQ8WWB7 406 aa12.39□□□□□ -0.43
COL6A1-206ENST00000498614 SPATA25Q9BR10 227 aa12.39□□□□□ -0.43
COL6A1-206ENST00000498614 UNC79Q9P2D8 2635 aa12.39□□□□□ -0.43
COL6A1-206ENST00000498614 H3BUX3 64 aa12.38□□□□□ -0.43
COL6A1-206ENST00000498614 CRIP2P52943 208 aaPredicted RBP12.38□□□□□ -0.43
COL6A1-206ENST00000498614 SUMO2P61956 95 aaKnown RBP12.38□□□□□ -0.43
COL6A1-206ENST00000498614 ORMDL2Q53FV1 153 aa12.38□□□□□ -0.43
COL6A1-206ENST00000498614 IGHV4-30-2A0A087WSY4 118 aa12.37□□□□□ -0.43
COL6A1-206ENST00000498614 RNF223E7ERA6 249 aa12.37□□□□□ -0.43
COL6A1-206ENST00000498614 HOXA3O43365 443 aaPredicted RBP12.37□□□□□ -0.43
COL6A1-206ENST00000498614 DEFB1P60022 68 aa12.37□□□□□ -0.43
COL6A1-206ENST00000498614 CLEC2AQ6UVW9 174 aa12.37□□□□□ -0.43
COL6A1-206ENST00000498614 C14orf178Q8N769 122 aaPredicted RBP12.37□□□□□ -0.43
COL6A1-206ENST00000498614 BAALCQ8WXS3 180 aa12.37□□□□□ -0.43
COL6A1-206ENST00000498614 PRADC1Q9BSG0 188 aa12.37□□□□□ -0.43
COL6A1-206ENST00000498614 Q6ZS46 218 aa12.36□□□□□ -0.43
COL6A1-206ENST00000498614 PGPEP1Q9NXJ5 209 aa12.36□□□□□ -0.43
COL6A1-206ENST00000498614 PRRC2AP48634 2157 aaKnown RBP12.36□□□□□ -0.43
COL6A1-206ENST00000498614 SLC25A16P16260 332 aa12.36□□□□□ -0.43
COL6A1-206ENST00000498614 BLCAPP62952 87 aa12.36□□□□□ -0.43
COL6A1-206ENST00000498614 C9orf139Q6ZV77 190 aa12.36□□□□□ -0.43
COL6A1-206ENST00000498614 GPHB5Q86YW7 130 aa12.36□□□□□ -0.43
COL6A1-206ENST00000498614 ATP6V0BQ99437 205 aa12.36□□□□□ -0.43
COL6A1-206ENST00000498614 PRSS29PA6NIE9 313 aa12.35□□□□□ -0.43
COL6A1-206ENST00000498614 C2orf66Q6UXQ4 117 aa12.35□□□□□ -0.43
COL6A1-206ENST00000498614 PLEKHB2Q96CS7 222 aa12.35□□□□□ -0.43
COL6A1-206ENST00000498614 C20orf78Q9BR46 151 aa12.35□□□□□ -0.43
COL6A1-206ENST00000498614 PDZD2O15018 2839 aa12.35□□□□□ -0.43
COL6A1-206ENST00000498614 PF4V1P10720 104 aa12.35□□□□□ -0.43
COL6A1-206ENST00000498614 ZFAND2AQ8N6M9 145 aa12.35□□□□□ -0.43
COL6A1-206ENST00000498614 MAPK1IP1LQ8NDC0 245 aa12.35□□□□□ -0.43
COL6A1-206ENST00000498614 NOTCH2Q04721 2471 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms