RNA–Protein interactions for RNA: ENST00000497730.1

TRA2A-210, Transcript of transformer 2 alpha homolog, human

TSL 3

Gene TRA2A, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRA2A-210	ENST00000497730	PPP1R1C	Q8WVI7	109 aa		0.33	□□□□□ -2.36
TRA2A-210	ENST00000497730	ZFYVE26	Q68DK2	2539 aa		0.33	□□□□□ -2.36
TRA2A-210	ENST00000497730	KDM5C	P41229	1560 aa		0.32	□□□□□ -2.36
TRA2A-210	ENST00000497730	KIDINS220	Q9ULH0	1771 aa		0.32	□□□□□ -2.36
TRA2A-210	ENST00000497730	DBI	P07108	87 aa	Known RBP	0.32	□□□□□ -2.36
TRA2A-210	ENST00000497730	NOP16	Q9Y3C1	178 aa	Known RBP	0.32	□□□□□ -2.36
TRA2A-210	ENST00000497730	RREB1	Q92766	1687 aa		0.32	□□□□□ -2.36
TRA2A-210	ENST00000497730	AFDN	P55196	1824 aa	Known RBP	0.31	□□□□□ -2.36
TRA2A-210	ENST00000497730	WDR97	A6NE52	1622 aa		0.31	□□□□□ -2.36
TRA2A-210	ENST00000497730	ZNF670-ZNF695	F2Z2N8	137 aa		0.31	□□□□□ -2.36
TRA2A-210	ENST00000497730	CLLU1	Q5K131	121 aa		0.31	□□□□□ -2.36
TRA2A-210	ENST00000497730	ATP6V0E2	Q8NHE4	81 aa		0.31	□□□□□ -2.36
TRA2A-210	ENST00000497730	AIF1L	Q9BQI0	150 aa		0.31	□□□□□ -2.36
TRA2A-210	ENST00000497730	BET1L	Q9NYM9	111 aa		0.31	□□□□□ -2.36
TRA2A-210	ENST00000497730	PIEZO1	Q92508	2521 aa		0.31	□□□□□ -2.36
TRA2A-210	ENST00000497730	CCDC171	Q6TFL3	1326 aa		0.31	□□□□□ -2.36
TRA2A-210	ENST00000497730	RBBP6	Q7Z6E9	1792 aa	Known RBP	0.3	□□□□□ -2.36
TRA2A-210	ENST00000497730		A0A096LNT2	108 aa		0.3	□□□□□ -2.36
TRA2A-210	ENST00000497730	TRAV2	A0A0B4J234	112 aa		0.3	□□□□□ -2.36
TRA2A-210	ENST00000497730	CXorf51A	A0A1B0GTR3	108 aa		0.3	□□□□□ -2.36
TRA2A-210	ENST00000497730	YPEL1	O60688	119 aa		0.3	□□□□□ -2.36
TRA2A-210	ENST00000497730	DR1	Q01658	176 aa		0.3	□□□□□ -2.36
TRA2A-210	ENST00000497730	DYNLRB2	Q8TF09	96 aa		0.3	□□□□□ -2.36
TRA2A-210	ENST00000497730	KMT2D	O14686	5537 aa		0.3	□□□□□ -2.36
TRA2A-210	ENST00000497730	TRAV12-2	A0A075B6T6	113 aa		0.29	□□□□□ -2.36
TRA2A-210	ENST00000497730	TCRBV3S1	A0A5B6	114 aa		0.29	□□□□□ -2.36
TRA2A-210	ENST00000497730	PYY	P10082	97 aa		0.29	□□□□□ -2.36
TRA2A-210	ENST00000497730	SYNE1	Q8NF91	8797 aa	Known RBP	0.29	□□□□□ -2.36
TRA2A-210	ENST00000497730	DLEC1	Q9Y238	1755 aa		0.29	□□□□□ -2.36
TRA2A-210	ENST00000497730	ARAP1	Q96P48	1450 aa		0.29	□□□□□ -2.36
TRA2A-210	ENST00000497730	HELZ	P42694	1942 aa	Known RBP	0.28	□□□□□ -2.36
TRA2A-210	ENST00000497730	TPR	P12270	2363 aa	Known RBP	0.28	□□□□□ -2.36
TRA2A-210	ENST00000497730	SPAG17	Q6Q759	2223 aa		0.28	□□□□□ -2.36
TRA2A-210	ENST00000497730	MCRIP1	C9JLW8	97 aa		0.28	□□□□□ -2.36
TRA2A-210	ENST00000497730		F2Z2F3	143 aa		0.28	□□□□□ -2.36
TRA2A-210	ENST00000497730	SLC25A6	P12236	298 aa		0.28	□□□□□ -2.36
TRA2A-210	ENST00000497730	VMO1	Q7Z5L0	202 aa		0.28	□□□□□ -2.36
TRA2A-210	ENST00000497730	AKAP14	Q86UN6	197 aa		0.28	□□□□□ -2.36
TRA2A-210	ENST00000497730	PYDC1	Q8WXC3	89 aa		0.28	□□□□□ -2.36
TRA2A-210	ENST00000497730	PTPRZ1	P23471	2315 aa	Predicted RBP	0.28	□□□□□ -2.36
TRA2A-210	ENST00000497730	XIRP1	Q702N8	1843 aa	Known RBP	0.28	□□□□□ -2.36
TRA2A-210	ENST00000497730		J3QLW9	94 aa		0.27	□□□□□ -2.37
TRA2A-210	ENST00000497730	ELOF1	P60002	83 aa	Known RBP	0.27	□□□□□ -2.37
TRA2A-210	ENST00000497730	ESPL1	Q14674	2120 aa		0.27	□□□□□ -2.37
TRA2A-210	ENST00000497730	ATP11AUN	Q6ZP68	121 aa		0.27	□□□□□ -2.37
TRA2A-210	ENST00000497730	CYP2G1P	Q6ZSU1	146 aa		0.27	□□□□□ -2.37
TRA2A-210	ENST00000497730	PRR15L	Q9BU68	103 aa		0.27	□□□□□ -2.37
TRA2A-210	ENST00000497730	PROK2	Q9HC23	129 aa		0.27	□□□□□ -2.37
TRA2A-210	ENST00000497730	LSM2	Q9Y333	95 aa	Known RBP	0.27	□□□□□ -2.37
TRA2A-210	ENST00000497730	ANKRD30A	Q9BXX3	1397 aa		0.27	□□□□□ -2.37
TRA2A-210	ENST00000497730	UHRF1BP1L	A0JNW5	1464 aa		0.27	□□□□□ -2.37
TRA2A-210	ENST00000497730	IGF2R	P11717	2491 aa		0.27	□□□□□ -2.37
TRA2A-210	ENST00000497730	SCGB1A1	P11684	91 aa		0.26	□□□□□ -2.37
TRA2A-210	ENST00000497730	NCS1	P62166	190 aa		0.26	□□□□□ -2.37
TRA2A-210	ENST00000497730	OR2T2	Q6IF00	324 aa		0.26	□□□□□ -2.37
TRA2A-210	ENST00000497730	ERG28	Q9UKR5	140 aa		0.26	□□□□□ -2.37
TRA2A-210	ENST00000497730	MACF1	Q9UPN3	7388 aa	Known RBP	0.26	□□□□□ -2.37
TRA2A-210	ENST00000497730	RBAKDN	A6NC62	111 aa		0.25	□□□□□ -2.37
TRA2A-210	ENST00000497730	EMX2	Q04743	252 aa		0.25	□□□□□ -2.37
TRA2A-210	ENST00000497730	MORN2	Q502X0	79 aa		0.25	□□□□□ -2.37
TRA2A-210	ENST00000497730	NDUFA11	Q86Y39	141 aa		0.25	□□□□□ -2.37
TRA2A-210	ENST00000497730	MMGT1	Q8N4V1	131 aa		0.25	□□□□□ -2.37
TRA2A-210	ENST00000497730	IFI27L1	Q96BM0	104 aa		0.25	□□□□□ -2.37
TRA2A-210	ENST00000497730	IGSF10	Q6WRI0	2623 aa		0.25	□□□□□ -2.37
TRA2A-210	ENST00000497730		M0R2P5	195 aa		0.24	□□□□□ -2.37
TRA2A-210	ENST00000497730	SYNE2	Q8WXH0	6885 aa	Known RBP	0.24	□□□□□ -2.37
TRA2A-210	ENST00000497730	CCDC179	H3BU77	68 aa		0.23	□□□□□ -2.37
TRA2A-210	ENST00000497730	BPESC1	Q9GZL8	116 aa		0.23	□□□□□ -2.37
TRA2A-210	ENST00000497730	KDM6B	O15054	1643 aa		0.23	□□□□□ -2.37
TRA2A-210	ENST00000497730	TANC1	Q9C0D5	1861 aa		0.22	□□□□□ -2.37
TRA2A-210	ENST00000497730	TRBV20-1	A0A075B6N2	111 aa		0.22	□□□□□ -2.37
TRA2A-210	ENST00000497730	COX4I1	P13073	169 aa		0.22	□□□□□ -2.37
TRA2A-210	ENST00000497730	HIST1H1A	Q02539	215 aa	Predicted RBP	0.22	□□□□□ -2.37
TRA2A-210	ENST00000497730	BATF3	Q9NR55	127 aa		0.22	□□□□□ -2.37
TRA2A-210	ENST00000497730	SYNJ1	O43426	1573 aa		0.22	□□□□□ -2.37
TRA2A-210	ENST00000497730	ABCA1	O95477	2261 aa		0.22	□□□□□ -2.37
TRA2A-210	ENST00000497730	FSIP2	Q5CZC0	6907 aa		0.22	□□□□□ -2.37
TRA2A-210	ENST00000497730	CKS1B	P61024	79 aa		0.21	□□□□□ -2.38
TRA2A-210	ENST00000497730	NPC2	P61916	151 aa		0.21	□□□□□ -2.38
TRA2A-210	ENST00000497730	C4orf33	Q8N1A6	199 aa		0.21	□□□□□ -2.38
TRA2A-210	ENST00000497730	LZIC	Q8WZA0	190 aa		0.21	□□□□□ -2.38
TRA2A-210	ENST00000497730	SMIM3	Q9BZL3	60 aa		0.21	□□□□□ -2.38
TRA2A-210	ENST00000497730	SAR1A	Q9NR31	198 aa		0.21	□□□□□ -2.38
TRA2A-210	ENST00000497730	CASZ1	Q86V15	1759 aa		0.21	□□□□□ -2.38
TRA2A-210	ENST00000497730	ERCC6	Q03468	1493 aa		0.21	□□□□□ -2.38
TRA2A-210	ENST00000497730	JMJD1C	Q15652	2540 aa		0.21	□□□□□ -2.38
TRA2A-210	ENST00000497730		J3QR89	54 aa		0.2	□□□□□ -2.38
TRA2A-210	ENST00000497730	CCL3L1	P16619	93 aa		0.2	□□□□□ -2.38
TRA2A-210	ENST00000497730	SSBP1	Q04837	148 aa	Known RBP	0.2	□□□□□ -2.38
TRA2A-210	ENST00000497730	FAM74A4	Q5TZK3	123 aa		0.2	□□□□□ -2.38
TRA2A-210	ENST00000497730	C20orf197	Q8N268	126 aa		0.2	□□□□□ -2.38
TRA2A-210	ENST00000497730	ABCA4	P78363	2273 aa		0.19	□□□□□ -2.38
TRA2A-210	ENST00000497730	PTPRM	P28827	1452 aa		0.19	□□□□□ -2.38
TRA2A-210	ENST00000497730	TRAV12-3	A0A0B4J271	114 aa		0.19	□□□□□ -2.38
TRA2A-210	ENST00000497730		M0R129	80 aa		0.19	□□□□□ -2.38
TRA2A-210	ENST00000497730	SPINK1	P00995	79 aa		0.19	□□□□□ -2.38
TRA2A-210	ENST00000497730	IGLC6	P0CF74	106 aa		0.19	□□□□□ -2.38
TRA2A-210	ENST00000497730	SPCS2	Q15005	226 aa		0.19	□□□□□ -2.38
TRA2A-210	ENST00000497730	LINC01545	Q5VT33	79 aa		0.19	□□□□□ -2.38
TRA2A-210	ENST00000497730	SLC48A1	Q6P1K1	146 aa		0.19	□□□□□ -2.38

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