RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 OR2H2O95918 312 aa0.21□□□□□ -2.38
PSPC1-205ENST00000497722 APOC1P02654 83 aa0.21□□□□□ -2.38
PSPC1-205ENST00000497722 DBIP07108 87 aaKnown RBP0.21□□□□□ -2.38
PSPC1-205ENST00000497722 AKR1D1P51857 326 aa0.21□□□□□ -2.38
PSPC1-205ENST00000497722 TMEM244Q5VVB8 128 aa0.21□□□□□ -2.38
PSPC1-205ENST00000497722 PYDC1Q8WXC3 89 aa0.21□□□□□ -2.38
PSPC1-205ENST00000497722 BANF2Q9H503 90 aa0.21□□□□□ -2.38
PSPC1-205ENST00000497722 TAS2R8Q9NYW2 309 aa0.21□□□□□ -2.38
PSPC1-205ENST00000497722 RBBP6Q7Z6E9 1792 aaKnown RBP0.21□□□□□ -2.38
PSPC1-205ENST00000497722 AHNAKQ09666 5890 aaKnown RBP0.21□□□□□ -2.38
PSPC1-205ENST00000497722 GPR98Q8WXG9 6306 aa0.2□□□□□ -2.38
PSPC1-205ENST00000497722 LAMB1P07942 1786 aa0.2□□□□□ -2.38
PSPC1-205ENST00000497722 TEX49A0A1B0GTD5 131 aa0.2□□□□□ -2.38
PSPC1-205ENST00000497722 POLR2JP52435 117 aaKnown RBP0.2□□□□□ -2.38
PSPC1-205ENST00000497722 SLC25A26Q70HW3 274 aa0.2□□□□□ -2.38
PSPC1-205ENST00000497722 ATP6V0E2Q8NHE4 81 aa0.2□□□□□ -2.38
PSPC1-205ENST00000497722 CALML5Q9NZT1 146 aa0.2□□□□□ -2.38
PSPC1-205ENST00000497722 ADGRB1O14514 1584 aa0.19□□□□□ -2.38
PSPC1-205ENST00000497722 CDK5RAP2Q96SN8 1893 aa0.19□□□□□ -2.38
PSPC1-205ENST00000497722 YPEL1O60688 119 aa0.19□□□□□ -2.38
PSPC1-205ENST00000497722 SMIM24O75264 130 aa0.19□□□□□ -2.38
PSPC1-205ENST00000497722 CCKP06307 115 aa0.19□□□□□ -2.38
PSPC1-205ENST00000497722 CMPK1P30085 196 aa0.19□□□□□ -2.38
PSPC1-205ENST00000497722 NDUFA11Q86Y39 141 aa0.19□□□□□ -2.38
PSPC1-205ENST00000497722 PPP1R1CQ8WVI7 109 aa0.19□□□□□ -2.38
PSPC1-205ENST00000497722 DSCR8Q96T75 97 aa0.19□□□□□ -2.38
PSPC1-205ENST00000497722 AIF1LQ9BQI0 150 aa0.19□□□□□ -2.38
PSPC1-205ENST00000497722 TMEM14BQ9NUH8 114 aa0.19□□□□□ -2.38
PSPC1-205ENST00000497722 SPAG17Q6Q759 2223 aa0.19□□□□□ -2.38
PSPC1-205ENST00000497722 KDM6BO15054 1643 aa0.19□□□□□ -2.38
PSPC1-205ENST00000497722 OVOS2A0A0J9YW53 1432 aa0.19□□□□□ -2.38
PSPC1-205ENST00000497722 OVOS2Q6IE36 1432 aa0.19□□□□□ -2.38
PSPC1-205ENST00000497722 MYH13Q9UKX3 1938 aa0.19□□□□□ -2.38
PSPC1-205ENST00000497722 TNS1Q9HBL0 1735 aaKnown RBP0.18□□□□□ -2.38
PSPC1-205ENST00000497722 FAT4Q6V0I7 4981 aa0.18□□□□□ -2.38
PSPC1-205ENST00000497722 M0R2P5 195 aa0.18□□□□□ -2.38
PSPC1-205ENST00000497722 SPINK1P00995 79 aa0.18□□□□□ -2.38
PSPC1-205ENST00000497722 ATP11AUNQ6ZP68 121 aa0.18□□□□□ -2.38
PSPC1-205ENST00000497722 VPS25Q9BRG1 176 aa0.18□□□□□ -2.38
PSPC1-205ENST00000497722 COA4Q9NYJ1 87 aa0.18□□□□□ -2.38
PSPC1-205ENST00000497722 LSM2Q9Y333 95 aaKnown RBP0.18□□□□□ -2.38
PSPC1-205ENST00000497722 MAST4O15021 2626 aa0.18□□□□□ -2.38
PSPC1-205ENST00000497722 PRG4Q92954 1404 aaPredicted RBP0.18□□□□□ -2.38
PSPC1-205ENST00000497722 SYNJ1O43426 1573 aa0.18□□□□□ -2.38
PSPC1-205ENST00000497722 MEGF8Q7Z7M0 2845 aa0.18□□□□□ -2.38
PSPC1-205ENST00000497722 TRAV12-2A0A075B6T6 113 aa0.17□□□□□ -2.38
PSPC1-205ENST00000497722 TRAV17A0A0B4J275 112 aa0.17□□□□□ -2.38
PSPC1-205ENST00000497722 RBP4P02753 201 aa0.17□□□□□ -2.38
PSPC1-205ENST00000497722 TSPAN19P0C672 248 aa0.17□□□□□ -2.38
PSPC1-205ENST00000497722 MPC1LP0DKB6 136 aa0.17□□□□□ -2.38
PSPC1-205ENST00000497722 PYYP10082 97 aa0.17□□□□□ -2.38
PSPC1-205ENST00000497722 EMX2Q04743 252 aa0.17□□□□□ -2.38
PSPC1-205ENST00000497722 OR2T2Q6IF00 324 aa0.17□□□□□ -2.38
PSPC1-205ENST00000497722 SNX29P2Q8IUI4 249 aa0.17□□□□□ -2.38
PSPC1-205ENST00000497722 DYNLRB2Q8TF09 96 aa0.17□□□□□ -2.38
PSPC1-205ENST00000497722 NOP16Q9Y3C1 178 aaKnown RBP0.17□□□□□ -2.38
PSPC1-205ENST00000497722 KMT2DO14686 5537 aa0.17□□□□□ -2.38
PSPC1-205ENST00000497722 ABCA4P78363 2273 aa0.17□□□□□ -2.38
PSPC1-205ENST00000497722 SYNE1Q8NF91 8797 aaKnown RBP0.17□□□□□ -2.38
PSPC1-205ENST00000497722 ARHGEF10O15013 1369 aa0.17□□□□□ -2.38
PSPC1-205ENST00000497722 AKAP11Q9UKA4 1901 aa0.17□□□□□ -2.38
PSPC1-205ENST00000497722 MUC22E2RYF6 1773 aaPredicted RBP0.17□□□□□ -2.38
PSPC1-205ENST00000497722 ERCC6Q03468 1493 aa0.16□□□□□ -2.38
PSPC1-205ENST00000497722 LRP1Q07954 4544 aaKnown RBP0.16□□□□□ -2.38
PSPC1-205ENST00000497722 PHIPQ8WWQ0 1821 aa0.16□□□□□ -2.38
PSPC1-205ENST00000497722 TRBV20-1A0A075B6N2 111 aa0.16□□□□□ -2.38
PSPC1-205ENST00000497722 MCRIP1C9JLW8 97 aa0.16□□□□□ -2.38
PSPC1-205ENST00000497722 F2Z2F3 143 aa0.16□□□□□ -2.38
PSPC1-205ENST00000497722 J3QLW9 94 aa0.16□□□□□ -2.38
PSPC1-205ENST00000497722 ARPC5O15511 151 aa0.16□□□□□ -2.38
PSPC1-205ENST00000497722 NCR2O95944 276 aa0.16□□□□□ -2.38
PSPC1-205ENST00000497722 ALX1Q15699 326 aa0.16□□□□□ -2.38
PSPC1-205ENST00000497722 CLLU1Q5K131 121 aa0.16□□□□□ -2.38
PSPC1-205ENST00000497722 VMO1Q7Z5L0 202 aa0.16□□□□□ -2.38
PSPC1-205ENST00000497722 MYH6P13533 1939 aa0.16□□□□□ -2.38
PSPC1-205ENST00000497722 LAMC3Q9Y6N6 1575 aa0.15□□□□□ -2.38
PSPC1-205ENST00000497722 DISP2A7MBM2 1401 aa0.15□□□□□ -2.39
PSPC1-205ENST00000497722 ABCA1O95477 2261 aa0.15□□□□□ -2.39
PSPC1-205ENST00000497722 CDK13Q14004 1512 aaKnown RBP0.15□□□□□ -2.39
PSPC1-205ENST00000497722 A0A087WTM6 91 aa0.15□□□□□ -2.39
PSPC1-205ENST00000497722 CCDC179H3BU77 68 aa0.15□□□□□ -2.39
PSPC1-205ENST00000497722 SLC25A6P12236 298 aa0.15□□□□□ -2.39
PSPC1-205ENST00000497722 ELOF1P60002 83 aaKnown RBP0.15□□□□□ -2.39
PSPC1-205ENST00000497722 TMEM141Q96I45 108 aa0.15□□□□□ -2.39
PSPC1-205ENST00000497722 PRR15LQ9BU68 103 aa0.15□□□□□ -2.39
PSPC1-205ENST00000497722 PROK2Q9HC23 129 aa0.15□□□□□ -2.39
PSPC1-205ENST00000497722 ERG28Q9UKR5 140 aa0.15□□□□□ -2.39
PSPC1-205ENST00000497722 NRXN2Q9P2S2 1712 aa0.15□□□□□ -2.39
PSPC1-205ENST00000497722 PARP14Q460N5 1801 aa0.15□□□□□ -2.39
PSPC1-205ENST00000497722 UNC13BO14795 1591 aa0.15□□□□□ -2.39
PSPC1-205ENST00000497722 SIPA1L3O60292 1781 aaPredicted RBP0.14□□□□□ -2.39
PSPC1-205ENST00000497722 FHAD1B1AJZ9 1412 aa0.14□□□□□ -2.39
PSPC1-205ENST00000497722 LOC105371267A0A1B0GV96 52 aa0.14□□□□□ -2.39
PSPC1-205ENST00000497722 IGLC6P0CF74 106 aa0.14□□□□□ -2.39
PSPC1-205ENST00000497722 CKS1BP61024 79 aa0.14□□□□□ -2.39
PSPC1-205ENST00000497722 HIST1H1AQ02539 215 aaPredicted RBP0.14□□□□□ -2.39
PSPC1-205ENST00000497722 MMGT1Q8N4V1 131 aa0.14□□□□□ -2.39
PSPC1-205ENST00000497722 SPRR2GQ9BYE4 73 aa0.14□□□□□ -2.39
PSPC1-205ENST00000497722 BET1LQ9NYM9 111 aa0.14□□□□□ -2.39
PSPC1-205ENST00000497722 GSKIPQ9P0R6 139 aa0.14□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms