RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 MCRIP1C9JLW8 97 aa-0.11□□□□□ -2.43
SMC4-223ENST00000493695 SCTP09683 121 aa-0.11□□□□□ -2.43
SMC4-223ENST00000493695 EMX2Q04743 252 aa-0.11□□□□□ -2.43
SMC4-223ENST00000493695 OR8I2Q8N0Y5 310 aa-0.11□□□□□ -2.43
SMC4-223ENST00000493695 SLC35B3Q9H1N7 401 aa-0.11□□□□□ -2.43
SMC4-223ENST00000493695 GINS2Q9Y248 185 aa-0.11□□□□□ -2.43
SMC4-223ENST00000493695 CASZ1Q86V15 1759 aa-0.11□□□□□ -2.43
SMC4-223ENST00000493695 TNS1Q9HBL0 1735 aaKnown RBP-0.12□□□□□ -2.43
SMC4-223ENST00000493695 TSTD3H0UI37 97 aa-0.12□□□□□ -2.43
SMC4-223ENST00000493695 OR8B8Q15620 311 aa-0.12□□□□□ -2.43
SMC4-223ENST00000493695 SLC25A26Q70HW3 274 aa-0.12□□□□□ -2.43
SMC4-223ENST00000493695 TAS2R8Q9NYW2 309 aa-0.12□□□□□ -2.43
SMC4-223ENST00000493695 ABCA4P78363 2273 aa-0.12□□□□□ -2.43
SMC4-223ENST00000493695 PTPRMP28827 1452 aa-0.13□□□□□ -2.43
SMC4-223ENST00000493695 TRAV12-2A0A075B6T6 113 aa-0.13□□□□□ -2.43
SMC4-223ENST00000493695 AKR1D1P51857 326 aa-0.13□□□□□ -2.43
SMC4-223ENST00000493695 ELOF1P60002 83 aaKnown RBP-0.13□□□□□ -2.43
SMC4-223ENST00000493695 DSCR8Q96T75 97 aa-0.13□□□□□ -2.43
SMC4-223ENST00000493695 HSPB11Q9Y547 144 aa-0.13□□□□□ -2.43
SMC4-223ENST00000493695 HIVEP3Q5T1R4 2406 aa-0.13□□□□□ -2.43
SMC4-223ENST00000493695 SSPOA2VEC9 5147 aa-0.13□□□□□ -2.43
SMC4-223ENST00000493695 CCDC171Q6TFL3 1326 aa-0.13□□□□□ -2.43
SMC4-223ENST00000493695 UNC13BO14795 1591 aa-0.14□□□□□ -2.43
SMC4-223ENST00000493695 TNFSF15O95150 251 aa-0.14□□□□□ -2.43
SMC4-223ENST00000493695 MT-ND4LP03901 98 aa-0.14□□□□□ -2.43
SMC4-223ENST00000493695 HLA-DRB4P13762 266 aa-0.14□□□□□ -2.43
SMC4-223ENST00000493695 Q5BKY6 102 aa-0.14□□□□□ -2.43
SMC4-223ENST00000493695 TMEM244Q5VVB8 128 aa-0.14□□□□□ -2.43
SMC4-223ENST00000493695 NDUFA11Q86Y39 141 aa-0.14□□□□□ -2.43
SMC4-223ENST00000493695 VPS25Q9BRG1 176 aa-0.14□□□□□ -2.43
SMC4-223ENST00000493695 SPRR2GQ9BYE4 73 aa-0.14□□□□□ -2.43
SMC4-223ENST00000493695 HLA-DRB4X5D2U9 266 aa-0.14□□□□□ -2.43
SMC4-223ENST00000493695 DMBT1Q9UGM3 2413 aaPredicted RBP-0.14□□□□□ -2.43
SMC4-223ENST00000493695 CDK13Q14004 1512 aaKnown RBP-0.14□□□□□ -2.43
SMC4-223ENST00000493695 SOGA1O94964 1423 aa-0.14□□□□□ -2.43
SMC4-223ENST00000493695 LAMC3Q9Y6N6 1575 aa-0.15□□□□□ -2.43
SMC4-223ENST00000493695 A0A1B0GW64 132 aa-0.15□□□□□ -2.43
SMC4-223ENST00000493695 C9JAW5 83 aa-0.15□□□□□ -2.43
SMC4-223ENST00000493695 PAEPP09466 180 aa-0.15□□□□□ -2.43
SMC4-223ENST00000493695 OR2T2Q6IF00 324 aa-0.15□□□□□ -2.43
SMC4-223ENST00000493695 TMEM141Q96I45 108 aa-0.15□□□□□ -2.43
SMC4-223ENST00000493695 COA4Q9NYJ1 87 aa-0.15□□□□□ -2.43
SMC4-223ENST00000493695 BET1LQ9NYM9 111 aa-0.15□□□□□ -2.43
SMC4-223ENST00000493695 CHD9Q3L8U1 2897 aa-0.16□□□□□ -2.43
SMC4-223ENST00000493695 TRAV17A0A0B4J275 112 aa-0.16□□□□□ -2.44
SMC4-223ENST00000493695 GNG14A0A1W2PPG7 69 aa-0.16□□□□□ -2.44
SMC4-223ENST00000493695 DEGS1O15121 323 aa-0.16□□□□□ -2.44
SMC4-223ENST00000493695 NEFHP12036 1026 aa-0.16□□□□□ -2.44
SMC4-223ENST00000493695 B2MP61769 119 aa-0.16□□□□□ -2.44
SMC4-223ENST00000493695 ATP6V0E2Q8NHE4 81 aa-0.16□□□□□ -2.44
SMC4-223ENST00000493695 PPP1R1CQ8WVI7 109 aa-0.16□□□□□ -2.44
SMC4-223ENST00000493695 SELENOSQ9BQE4 189 aa-0.16□□□□□ -2.44
SMC4-223ENST00000493695 VIRMAQ69YN4 1812 aaKnown RBP-0.16□□□□□ -2.44
SMC4-223ENST00000493695 SYNE2Q8WXH0 6885 aaKnown RBP-0.17□□□□□ -2.44
SMC4-223ENST00000493695 A0A087WTM6 91 aa-0.17□□□□□ -2.44
SMC4-223ENST00000493695 H0YJX3 145 aa-0.17□□□□□ -2.44
SMC4-223ENST00000493695 APOC1P02654 83 aa-0.17□□□□□ -2.44
SMC4-223ENST00000493695 ATP11AUNQ6ZP68 121 aa-0.17□□□□□ -2.44
SMC4-223ENST00000493695 PRR15LQ9BU68 103 aa-0.17□□□□□ -2.44
SMC4-223ENST00000493695 BANF2Q9H503 90 aa-0.17□□□□□ -2.44
SMC4-223ENST00000493695 HIGD1AQ9Y241 93 aa-0.17□□□□□ -2.44
SMC4-223ENST00000493695 PLXNA1Q9UIW2 1896 aa-0.18□□□□□ -2.44
SMC4-223ENST00000493695 SMIM24O75264 130 aa-0.18□□□□□ -2.44
SMC4-223ENST00000493695 SLC25A6P12236 298 aa-0.18□□□□□ -2.44
SMC4-223ENST00000493695 TCTE3Q8IZS6 198 aa-0.18□□□□□ -2.44
SMC4-223ENST00000493695 DYNLRB2Q8TF09 96 aa-0.18□□□□□ -2.44
SMC4-223ENST00000493695 MAGOHBQ96A72 148 aaKnown RBP-0.18□□□□□ -2.44
SMC4-223ENST00000493695 SPANXCQ9NY87 97 aa-0.18□□□□□ -2.44
SMC4-223ENST00000493695 CALML5Q9NZT1 146 aa-0.18□□□□□ -2.44
SMC4-223ENST00000493695 MED13LQ71F56 2210 aa-0.18□□□□□ -2.44
SMC4-223ENST00000493695 SSC5DA1L4H1 1573 aa-0.19□□□□□ -2.44
SMC4-223ENST00000493695 GVQW2A0A096LPI5 108 aaPredicted RBP-0.19□□□□□ -2.44
SMC4-223ENST00000493695 BORCS7-ASMTA0A0B4J1R7 106 aa-0.19□□□□□ -2.44
SMC4-223ENST00000493695 TFF1P04155 84 aa-0.19□□□□□ -2.44
SMC4-223ENST00000493695 MORN2Q502X0 79 aa-0.19□□□□□ -2.44
SMC4-223ENST00000493695 TAC4Q86UU9 113 aa-0.19□□□□□ -2.44
SMC4-223ENST00000493695 SNX29P2Q8IUI4 249 aa-0.19□□□□□ -2.44
SMC4-223ENST00000493695 BPESC1Q9GZL8 116 aa-0.19□□□□□ -2.44
SMC4-223ENST00000493695 SPANXA1Q9NS26 97 aa-0.19□□□□□ -2.44
SMC4-223ENST00000493695 UBR5O95071 2799 aaPredicted RBP-0.19□□□□□ -2.44
SMC4-223ENST00000493695 ZNF670-ZNF695F2Z2N8 137 aa-0.2□□□□□ -2.44
SMC4-223ENST00000493695 M0R2P5 195 aa-0.2□□□□□ -2.44
SMC4-223ENST00000493695 YPEL1O60688 119 aa-0.2□□□□□ -2.44
SMC4-223ENST00000493695 SPINK1P00995 79 aa-0.2□□□□□ -2.44
SMC4-223ENST00000493695 RBP4P02753 201 aa-0.2□□□□□ -2.44
SMC4-223ENST00000493695 NOP16Q9Y3C1 178 aaKnown RBP-0.2□□□□□ -2.44
SMC4-223ENST00000493695 F5P12259 2224 aa-0.21□□□□□ -2.44
SMC4-223ENST00000493695 KIF13AQ9H1H9 1805 aa-0.21□□□□□ -2.44
SMC4-223ENST00000493695 CCL3L1P16619 93 aa-0.21□□□□□ -2.44
SMC4-223ENST00000493695 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa-0.21□□□□□ -2.44
SMC4-223ENST00000493695 IFI27L1Q96BM0 104 aa-0.21□□□□□ -2.44
SMC4-223ENST00000493695 LSM2Q9Y333 95 aaKnown RBP-0.21□□□□□ -2.44
SMC4-223ENST00000493695 F8P00451 2351 aa-0.21□□□□□ -2.44
SMC4-223ENST00000493695 FSIP2Q5CZC0 6907 aa-0.22□□□□□ -2.44
SMC4-223ENST00000493695 TCRBV3S1A0A5B6 114 aa-0.22□□□□□ -2.44
SMC4-223ENST00000493695 RBAKDNA6NC62 111 aa-0.22□□□□□ -2.44
SMC4-223ENST00000493695 F2Z2F3 143 aa-0.22□□□□□ -2.44
SMC4-223ENST00000493695 CMPK1P30085 196 aa-0.22□□□□□ -2.44
SMC4-223ENST00000493695 CCDC153Q494R4 210 aa-0.22□□□□□ -2.44
SMC4-223ENST00000493695 ERG28Q9UKR5 140 aa-0.22□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 118.6 ms