RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 IGHV3-73A0A0B4J1V6 119 aa17.03■□□□□ 0.32
HMGN1-217ENST00000489072 A0A1B0GV50 99 aa17.03■□□□□ 0.32
HMGN1-217ENST00000489072 PAGE4O60829 102 aa17.03■□□□□ 0.32
HMGN1-217ENST00000489072 TMUB2Q71RG4 321 aa17.03■□□□□ 0.32
HMGN1-217ENST00000489072 WFDC10BQ8IUB3 73 aa17.03■□□□□ 0.32
HMGN1-217ENST00000489072 ZFP30Q9Y2G7 519 aa17.03■□□□□ 0.32
HMGN1-217ENST00000489072 UBE2G1P62253 170 aa17.02■□□□□ 0.32
HMGN1-217ENST00000489072 SLC25A29Q8N8R3 303 aa17.02■□□□□ 0.32
HMGN1-217ENST00000489072 TCEAL7Q9BRU2 100 aa17.02■□□□□ 0.32
HMGN1-217ENST00000489072 LRP1BQ9NZR2 4599 aa17.01■□□□□ 0.31
HMGN1-217ENST00000489072 TRBV6-1A0A0K0K1D8 114 aa17.01■□□□□ 0.31
HMGN1-217ENST00000489072 S100A4P26447 101 aaKnown RBP17.01■□□□□ 0.31
HMGN1-217ENST00000489072 ASIPP42127 132 aa17.01■□□□□ 0.31
HMGN1-217ENST00000489072 Q6ZRN7 208 aaPredicted RBP17.01■□□□□ 0.31
HMGN1-217ENST00000489072 B4DEV8 164 aa17■□□□□ 0.31
HMGN1-217ENST00000489072 CIDEAO60543 219 aa17■□□□□ 0.31
HMGN1-217ENST00000489072 SH2D1AO60880 128 aa17■□□□□ 0.31
HMGN1-217ENST00000489072 LTAP01374 205 aa17■□□□□ 0.31
HMGN1-217ENST00000489072 NHLRC2Q8NBF2 726 aa17■□□□□ 0.31
HMGN1-217ENST00000489072 TNFRSF18Q9Y5U5 241 aa17■□□□□ 0.31
HMGN1-217ENST00000489072 KRBOX1C9JBD0 128 aa16.99■□□□□ 0.31
HMGN1-217ENST00000489072 M0R036 132 aa16.99■□□□□ 0.31
HMGN1-217ENST00000489072 PFDN1O60925 122 aa16.99■□□□□ 0.31
HMGN1-217ENST00000489072 AKR1C3P42330 323 aa16.99■□□□□ 0.31
HMGN1-217ENST00000489072 TRBV6-4A0A1B0GX49 114 aa16.98■□□□□ 0.31
HMGN1-217ENST00000489072 C16orf90A8MZG2 172 aa16.98■□□□□ 0.31
HMGN1-217ENST00000489072 EIF5AP63241 154 aaKnown RBP16.98■□□□□ 0.31
HMGN1-217ENST00000489072 FAM162BQ5T6X4 162 aa16.98■□□□□ 0.31
HMGN1-217ENST00000489072 SH2D6Q7Z4S9 175 aa16.98■□□□□ 0.31
HMGN1-217ENST00000489072 IL36BQ9NZH7 164 aa16.98■□□□□ 0.31
HMGN1-217ENST00000489072 LY96Q9Y6Y9 160 aa16.98■□□□□ 0.31
HMGN1-217ENST00000489072 H3BVH4 76 aa16.97■□□□□ 0.31
HMGN1-217ENST00000489072 H2AFB1P0C5Y9 115 aa16.97■□□□□ 0.31
HMGN1-217ENST00000489072 TPT1P13693 172 aaKnown RBP16.97■□□□□ 0.31
HMGN1-217ENST00000489072 RHOHQ15669 191 aa16.97■□□□□ 0.31
HMGN1-217ENST00000489072 ZNF674Q2M3X9 581 aa16.97■□□□□ 0.31
HMGN1-217ENST00000489072 DNLZQ5SXM8 178 aa16.97■□□□□ 0.31
HMGN1-217ENST00000489072 Q6ZSN1 163 aa16.97■□□□□ 0.31
HMGN1-217ENST00000489072 PRADC1Q9BSG0 188 aa16.97■□□□□ 0.31
HMGN1-217ENST00000489072 PARLQ9H300 379 aa16.97■□□□□ 0.31
HMGN1-217ENST00000489072 SCO2A0A1W2PP80 73 aa16.96■□□□□ 0.31
HMGN1-217ENST00000489072 GRIFINA4D1Z8 144 aa16.96■□□□□ 0.31
HMGN1-217ENST00000489072 TIRAPP58753 221 aa16.96■□□□□ 0.31
HMGN1-217ENST00000489072 PIK3CD-AS1Q5SR53 167 aa16.96■□□□□ 0.31
HMGN1-217ENST00000489072 SPATA12Q7Z6I5 190 aa16.96■□□□□ 0.31
HMGN1-217ENST00000489072 JPT2Q9H910 190 aa16.96■□□□□ 0.31
HMGN1-217ENST00000489072 DNAH10OSP0CZ25 163 aa16.95■□□□□ 0.3
HMGN1-217ENST00000489072 LGALSLQ3ZCW2 172 aaPredicted RBP16.95■□□□□ 0.3
HMGN1-217ENST00000489072 DNAH5Q8TE73 4624 aa16.94■□□□□ 0.3
HMGN1-217ENST00000489072 PCLOQ9Y6V0 5065 aa16.94■□□□□ 0.3
HMGN1-217ENST00000489072 A8MWV9 139 aa16.94■□□□□ 0.3
HMGN1-217ENST00000489072 ARMS2P0C7Q2 107 aa16.94■□□□□ 0.3
HMGN1-217ENST00000489072 MGST1P10620 155 aaKnown RBP16.94■□□□□ 0.3
HMGN1-217ENST00000489072 KRTAP10-2P60368 255 aa16.94■□□□□ 0.3
HMGN1-217ENST00000489072 LINC01559Q495D7 138 aa16.94■□□□□ 0.3
HMGN1-217ENST00000489072 DMRTA1Q5VZB9 504 aa16.94■□□□□ 0.3
HMGN1-217ENST00000489072 TMSB15BA0A087X1C1 80 aa16.93■□□□□ 0.3
HMGN1-217ENST00000489072 UFSP1Q6NVU6 142 aa16.93■□□□□ 0.3
HMGN1-217ENST00000489072 ZFP2Q6ZN57 461 aa16.93■□□□□ 0.3
HMGN1-217ENST00000489072 TCTE3Q8IZS6 198 aa16.93■□□□□ 0.3
HMGN1-217ENST00000489072 SAMD10Q9BYL1 202 aa16.93■□□□□ 0.3
HMGN1-217ENST00000489072 HSPG2P98160 4391 aa16.92■□□□□ 0.3
HMGN1-217ENST00000489072 TRAV9-2A0A087WT02 112 aa16.92■□□□□ 0.3
HMGN1-217ENST00000489072 CCL20P78556 96 aa16.92■□□□□ 0.3
HMGN1-217ENST00000489072 KRTAP17-1Q9BYP8 105 aa16.92■□□□□ 0.3
HMGN1-217ENST00000489072 EVI2AP22794 236 aa16.91■□□□□ 0.3
HMGN1-217ENST00000489072 SCRT2Q9NQ03 307 aa16.91■□□□□ 0.3
HMGN1-217ENST00000489072 K7EP13 123 aa16.9■□□□□ 0.3
HMGN1-217ENST00000489072 S100A9P06702 114 aaKnown RBP16.9■□□□□ 0.3
HMGN1-217ENST00000489072 MLST8Q9BVC4 326 aa16.9■□□□□ 0.3
HMGN1-217ENST00000489072 MSRB1Q9NZV6 116 aa16.9■□□□□ 0.3
HMGN1-217ENST00000489072 Q6ZNX1 250 aa16.89■□□□□ 0.29
HMGN1-217ENST00000489072 SYT8Q8NBV8 401 aa16.89■□□□□ 0.29
HMGN1-217ENST00000489072 Q9UF83 564 aa16.89■□□□□ 0.29
HMGN1-217ENST00000489072 TRAV1-1A0A0B4J248 108 aa16.88■□□□□ 0.29
HMGN1-217ENST00000489072 IGHV3-38A0A0C4DH36 116 aa16.88■□□□□ 0.29
HMGN1-217ENST00000489072 CRYGDP07320 174 aa16.88■□□□□ 0.29
HMGN1-217ENST00000489072 LINC00694P0DN24 101 aa16.88■□□□□ 0.29
HMGN1-217ENST00000489072 NFE4Q86UQ8 179 aa16.88■□□□□ 0.29
HMGN1-217ENST00000489072 BAGE2Q86Y30 109 aa16.88■□□□□ 0.29
HMGN1-217ENST00000489072 ATP6V0E2Q8NHE4 81 aa16.88■□□□□ 0.29
HMGN1-217ENST00000489072 C14orf178Q8N769 122 aaPredicted RBP16.87■□□□□ 0.29
HMGN1-217ENST00000489072 GTSF1LQ9H1H1 148 aa16.87■□□□□ 0.29
HMGN1-217ENST00000489072 GNG13Q9P2W3 67 aa16.87■□□□□ 0.29
HMGN1-217ENST00000489072 PHLDA3Q9Y5J5 127 aa16.87■□□□□ 0.29
HMGN1-217ENST00000489072 APOBP04114 4563 aaKnown RBP16.87■□□□□ 0.29
HMGN1-217ENST00000489072 GAGE12JA6NER3 117 aa16.86■□□□□ 0.29
HMGN1-217ENST00000489072 RAB5CP51148 216 aa16.86■□□□□ 0.29
HMGN1-217ENST00000489072 RPL19P84098 196 aaKnown RBP16.86■□□□□ 0.29
HMGN1-217ENST00000489072 GAGE1Q13065 139 aa16.86■□□□□ 0.29
HMGN1-217ENST00000489072 GAGE4Q13068 117 aa16.86■□□□□ 0.29
HMGN1-217ENST00000489072 GAGE5Q13069 117 aa16.86■□□□□ 0.29
HMGN1-217ENST00000489072 GAGE13Q4V321 117 aa16.86■□□□□ 0.29
HMGN1-217ENST00000489072 LINC01556Q5JQF7 62 aa16.86■□□□□ 0.29
HMGN1-217ENST00000489072 OR10J3Q5JRS4 329 aa16.86■□□□□ 0.29
HMGN1-217ENST00000489072 LELP1Q5T871 98 aa16.86■□□□□ 0.29
HMGN1-217ENST00000489072 SFRP2Q96HF1 295 aa16.86■□□□□ 0.29
HMGN1-217ENST00000489072 MANBALQ9NQG1 85 aa16.86■□□□□ 0.29
HMGN1-217ENST00000489072 TRAV8-6A0A0B4J262 113 aa16.85■□□□□ 0.29
HMGN1-217ENST00000489072 M0R381 172 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms