RNA–Protein interactions for RNA: ENST00000487386.1

LINC00888-204, long intergenic non-protein coding RNA 888, humanhuman

BASIC

Gene LINC00888, Length 421 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-204ENST00000487386 TRGV9Q99603 122 aa1.84□□□□□ -2.11
LINC00888-204ENST00000487386 ARV1Q9H2C2 271 aa1.84□□□□□ -2.11
LINC00888-204ENST00000487386 RPRMQ9NS64 109 aa1.84□□□□□ -2.11
LINC00888-204ENST00000487386 RABAC1Q9UI14 185 aa1.84□□□□□ -2.11
LINC00888-204ENST00000487386 FUT9Q9Y231 359 aa1.84□□□□□ -2.11
LINC00888-204ENST00000487386 PUS1Q9Y606 427 aaKnown RBP eCLIP1.84□□□□□ -2.11
LINC00888-204ENST00000487386 DCHS2Q6V1P9 2916 aa1.84□□□□□ -2.11
LINC00888-204ENST00000487386 NAV2Q8IVL1 2488 aa1.84□□□□□ -2.12
LINC00888-204ENST00000487386 DOCK11Q5JSL3 2073 aa1.84□□□□□ -2.12
LINC00888-204ENST00000487386 ASH1LQ9NR48 2969 aaKnown RBP1.83□□□□□ -2.12
LINC00888-204ENST00000487386 USP9YO00507 2555 aaPredicted RBP1.83□□□□□ -2.12
LINC00888-204ENST00000487386 LRBAP50851 2863 aa1.83□□□□□ -2.12
LINC00888-204ENST00000487386 IGKV3-7A0A075B6H7 116 aa1.83□□□□□ -2.12
LINC00888-204ENST00000487386 IGKV1D-37A0A075B6S9 117 aa1.83□□□□□ -2.12
LINC00888-204ENST00000487386 TRAV30A0A087WSZ9 112 aa1.83□□□□□ -2.12
LINC00888-204ENST00000487386 TRBV7-1A0A0A6YYK4 115 aa1.83□□□□□ -2.12
LINC00888-204ENST00000487386 RAB19A4D1S5 217 aa1.83□□□□□ -2.12
LINC00888-204ENST00000487386 GGTLC3B5MD39 225 aa1.83□□□□□ -2.12
LINC00888-204ENST00000487386 F6UZH7 168 aa1.83□□□□□ -2.12
LINC00888-204ENST00000487386 SLC17A3O00476 420 aa1.83□□□□□ -2.12
LINC00888-204ENST00000487386 HYPMO75409 117 aa1.83□□□□□ -2.12
LINC00888-204ENST00000487386 APOC3P02656 99 aa1.83□□□□□ -2.12
LINC00888-204ENST00000487386 SLC25A5P05141 298 aaKnown RBP1.83□□□□□ -2.12
LINC00888-204ENST00000487386 CRYGCP07315 174 aa1.83□□□□□ -2.12
LINC00888-204ENST00000487386 STAG3L2P0CL84 134 aa1.83□□□□□ -2.12
LINC00888-204ENST00000487386 STAG3L3P0CL85 134 aa1.83□□□□□ -2.12
LINC00888-204ENST00000487386 RD3LP0DJH9 198 aa1.83□□□□□ -2.12
LINC00888-204ENST00000487386 C8orf88P0DMB2 117 aa1.83□□□□□ -2.12
LINC00888-204ENST00000487386 S100A1P23297 94 aa1.83□□□□□ -2.12
LINC00888-204ENST00000487386 S100A7P31151 101 aa1.83□□□□□ -2.12
LINC00888-204ENST00000487386 BMI1P35226 326 aa1.83□□□□□ -2.12
LINC00888-204ENST00000487386 TAGLN2P37802 199 aaKnown RBP1.83□□□□□ -2.12
LINC00888-204ENST00000487386 BLCAPP62952 87 aa1.83□□□□□ -2.12
LINC00888-204ENST00000487386 GNG5P63218 68 aa1.83□□□□□ -2.12
LINC00888-204ENST00000487386 ATP5G2Q06055 141 aa1.83□□□□□ -2.12
LINC00888-204ENST00000487386 PEA15Q15121 130 aa1.83□□□□□ -2.12
LINC00888-204ENST00000487386 ADIRFQ15847 76 aa1.83□□□□□ -2.12
LINC00888-204ENST00000487386 Q86TA4 180 aa1.83□□□□□ -2.12
LINC00888-204ENST00000487386 RPP25LQ8N5L8 163 aaKnown RBP1.83□□□□□ -2.12
LINC00888-204ENST00000487386 TTC9CQ8N5M4 171 aa1.83□□□□□ -2.12
LINC00888-204ENST00000487386 COMMD1Q8N668 190 aa1.83□□□□□ -2.12
LINC00888-204ENST00000487386 SPANXA2-OT1Q8N9U9 137 aa1.83□□□□□ -2.12
LINC00888-204ENST00000487386 CMTM2Q8TAZ6 248 aa1.83□□□□□ -2.12
LINC00888-204ENST00000487386 METTL26Q96S19 204 aa1.83□□□□□ -2.12
LINC00888-204ENST00000487386 SMIM7Q9BQ49 75 aa1.83□□□□□ -2.12
LINC00888-204ENST00000487386 SHANK2-AS3Q9BTD1 123 aa1.83□□□□□ -2.12
LINC00888-204ENST00000487386 TMEM167BQ9NRX6 74 aa1.83□□□□□ -2.12
LINC00888-204ENST00000487386 VAX2Q9UIW0 290 aa1.83□□□□□ -2.12
LINC00888-204ENST00000487386 GOLT1BQ9Y3E0 138 aa1.83□□□□□ -2.12
LINC00888-204ENST00000487386 ARL2-SNX15V9GYD0 113 aa1.83□□□□□ -2.12
LINC00888-204ENST00000487386 FLNCQ14315 2725 aa1.83□□□□□ -2.12
LINC00888-204ENST00000487386 CHD6Q8TD26 2715 aa1.83□□□□□ -2.12
LINC00888-204ENST00000487386 UNC79Q9P2D8 2635 aa1.83□□□□□ -2.12
LINC00888-204ENST00000487386 CRYBG3Q68DQ2 2970 aa1.83□□□□□ -2.12
LINC00888-204ENST00000487386 GCN1Q92616 2671 aaKnown RBP1.83□□□□□ -2.12
LINC00888-204ENST00000487386 FASNP49327 2511 aaKnown RBP1.82□□□□□ -2.12
LINC00888-204ENST00000487386 POLQO75417 2590 aa1.82□□□□□ -2.12
LINC00888-204ENST00000487386 ABCA12Q86UK0 2595 aa1.82□□□□□ -2.12
LINC00888-204ENST00000487386 ITPR3Q14573 2671 aa1.82□□□□□ -2.12
LINC00888-204ENST00000487386 IGKV2-40A0A087WW87 121 aaPredicted RBP1.82□□□□□ -2.12
LINC00888-204ENST00000487386 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.82□□□□□ -2.12
LINC00888-204ENST00000487386 TRBV9A0A0B4J1U6 114 aa1.82□□□□□ -2.12
LINC00888-204ENST00000487386 TRAV5A0A0B4J249 113 aa1.82□□□□□ -2.12
LINC00888-204ENST00000487386 RBFOX3A6NFN3 312 aa1.82□□□□□ -2.12
LINC00888-204ENST00000487386 ZNF727A8MUV8 499 aa1.82□□□□□ -2.12
LINC00888-204ENST00000487386 A8MWP6 167 aa1.82□□□□□ -2.12
LINC00888-204ENST00000487386 KRBOX1C9JBD0 128 aa1.82□□□□□ -2.12
LINC00888-204ENST00000487386 CLDN34H7C241 214 aa1.82□□□□□ -2.12
LINC00888-204ENST00000487386 DNASE2O00115 360 aaPredicted RBP1.82□□□□□ -2.12
LINC00888-204ENST00000487386 PDE6DO43924 150 aa1.82□□□□□ -2.12
LINC00888-204ENST00000487386 GGCTO75223 188 aaKnown RBP1.82□□□□□ -2.12
LINC00888-204ENST00000487386 SCO1O75880 301 aa1.82□□□□□ -2.12
LINC00888-204ENST00000487386 IGKV2D-40P01614 121 aaPredicted RBP1.82□□□□□ -2.12
LINC00888-204ENST00000487386 PRB4P10163 310 aaPredicted RBP1.82□□□□□ -2.12
LINC00888-204ENST00000487386 MGST1P10620 155 aaKnown RBP1.82□□□□□ -2.12
LINC00888-204ENST00000487386 RPL7P18124 248 aaKnown RBP1.82□□□□□ -2.12
LINC00888-204ENST00000487386 PSMB8P28062 276 aa1.82□□□□□ -2.12
LINC00888-204ENST00000487386 GALR1P47211 349 aa1.82□□□□□ -2.12
LINC00888-204ENST00000487386 YPEL3P61236 119 aaPredicted RBP1.82□□□□□ -2.12
LINC00888-204ENST00000487386 CENPWQ5EE01 88 aa1.82□□□□□ -2.12
LINC00888-204ENST00000487386 BPIFA4PQ86YQ2 179 aa1.82□□□□□ -2.12
LINC00888-204ENST00000487386 CBLN2Q8IUK8 224 aa1.82□□□□□ -2.12
LINC00888-204ENST00000487386 OR8I2Q8N0Y5 310 aa1.82□□□□□ -2.12
LINC00888-204ENST00000487386 SVBPQ8N300 66 aa1.82□□□□□ -2.12
LINC00888-204ENST00000487386 C5orf17Q8NAS9 161 aa1.82□□□□□ -2.12
LINC00888-204ENST00000487386 ZNF738Q8NE65 137 aa1.82□□□□□ -2.12
LINC00888-204ENST00000487386 Q8TAT8 98 aa1.82□□□□□ -2.12
LINC00888-204ENST00000487386 Q8WTZ3 238 aa1.82□□□□□ -2.12
LINC00888-204ENST00000487386 C4orf3Q8WVX3 66 aa1.82□□□□□ -2.12
LINC00888-204ENST00000487386 USMG5Q96IX5 58 aa1.82□□□□□ -2.12
LINC00888-204ENST00000487386 SLC50A1Q9BRV3 221 aa1.82□□□□□ -2.12
LINC00888-204ENST00000487386 DERL1Q9BUN8 251 aa1.82□□□□□ -2.12
LINC00888-204ENST00000487386 NKX6-2Q9C056 277 aaPredicted RBP1.82□□□□□ -2.12
LINC00888-204ENST00000487386 OR51M1Q9H341 326 aa1.82□□□□□ -2.12
LINC00888-204ENST00000487386 DAZ1Q9NQZ3 744 aaKnown RBP1.82□□□□□ -2.12
LINC00888-204ENST00000487386 MED9Q9NWA0 146 aa1.82□□□□□ -2.12
LINC00888-204ENST00000487386 CARHSP1Q9Y2V2 147 aaKnown RBP1.82□□□□□ -2.12
LINC00888-204ENST00000487386 UFC1Q9Y3C8 167 aa1.82□□□□□ -2.12
LINC00888-204ENST00000487386 CSMD2Q7Z408 3487 aa1.82□□□□□ -2.12
LINC00888-204ENST00000487386 FLNAP21333 2647 aaKnown RBP1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms