RNA–Protein interactions for RNA: ENST00000469939.1

TTC3-213, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2

Gene TTC3, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-213ENST00000469939 MAGI1Q96QZ7 1491 aaPredicted RBP1.73□□□□□ -2.13
TTC3-213ENST00000469939 RAPGEF2Q9Y4G8 1499 aa1.73□□□□□ -2.13
TTC3-213ENST00000469939 ZNF609O15014 1411 aa1.73□□□□□ -2.13
TTC3-213ENST00000469939 PTPRDP23468 1912 aa1.72□□□□□ -2.13
TTC3-213ENST00000469939 CCDC141Q6ZP82 1450 aa1.72□□□□□ -2.13
TTC3-213ENST00000469939 A0A0J9YY99 117 aa1.72□□□□□ -2.13
TTC3-213ENST00000469939 IGLV3-1P01715 115 aa1.72□□□□□ -2.13
TTC3-213ENST00000469939 APODP05090 189 aa1.72□□□□□ -2.13
TTC3-213ENST00000469939 LINC00299Q6ZSB3 139 aa1.72□□□□□ -2.13
TTC3-213ENST00000469939 KCNRGQ8N5I3 272 aa1.72□□□□□ -2.13
TTC3-213ENST00000469939 TMEM203Q969S6 136 aa1.72□□□□□ -2.13
TTC3-213ENST00000469939 PPP3R2Q96LZ3 170 aa1.72□□□□□ -2.13
TTC3-213ENST00000469939 OBSCN-AS1Q96MR7 158 aa1.72□□□□□ -2.13
TTC3-213ENST00000469939 PSMG3Q9BT73 122 aaPredicted RBP1.72□□□□□ -2.13
TTC3-213ENST00000469939 COA4Q9NYJ1 87 aa1.72□□□□□ -2.13
TTC3-213ENST00000469939 SPEF2Q9C093 1822 aa1.72□□□□□ -2.13
TTC3-213ENST00000469939 MED13Q9UHV7 2174 aa1.72□□□□□ -2.13
TTC3-213ENST00000469939 AKAP12Q02952 1782 aa1.72□□□□□ -2.13
TTC3-213ENST00000469939 INO80Q9ULG1 1556 aaPredicted RBP1.72□□□□□ -2.13
TTC3-213ENST00000469939 KTN1Q86UP2 1357 aaKnown RBP1.72□□□□□ -2.13
TTC3-213ENST00000469939 AKAP11Q9UKA4 1901 aa1.72□□□□□ -2.13
TTC3-213ENST00000469939 CHD1O14646 1710 aa1.71□□□□□ -2.13
TTC3-213ENST00000469939 CTTNBP2Q8WZ74 1663 aa1.71□□□□□ -2.14
TTC3-213ENST00000469939 TRAV12-2A0A075B6T6 113 aa1.71□□□□□ -2.14
TTC3-213ENST00000469939 TRBV6-7A0A0A0MS04 114 aa1.71□□□□□ -2.14
TTC3-213ENST00000469939 IGKCP01834 107 aa1.71□□□□□ -2.14
TTC3-213ENST00000469939 PRB4P10163 310 aaPredicted RBP1.71□□□□□ -2.14
TTC3-213ENST00000469939 IL7P13232 177 aa1.71□□□□□ -2.14
TTC3-213ENST00000469939 KRTAP12-3P60328 96 aa1.71□□□□□ -2.14
TTC3-213ENST00000469939 RHOHQ15669 191 aa1.71□□□□□ -2.14
TTC3-213ENST00000469939 MEIG1Q5JSS6 88 aa1.71□□□□□ -2.14
TTC3-213ENST00000469939 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.71□□□□□ -2.14
TTC3-213ENST00000469939 TET1Q8NFU7 2136 aa1.71□□□□□ -2.14
TTC3-213ENST00000469939 VSTM2AQ8TAG5 236 aa1.71□□□□□ -2.14
TTC3-213ENST00000469939 DYNLRB2Q8TF09 96 aa1.71□□□□□ -2.14
TTC3-213ENST00000469939 WFDC10AQ9H1F0 79 aa1.71□□□□□ -2.14
TTC3-213ENST00000469939 DNMBPQ6XZF7 1577 aa1.71□□□□□ -2.14
TTC3-213ENST00000469939 MAP3K1Q13233 1512 aa1.71□□□□□ -2.14
TTC3-213ENST00000469939 FYCO1Q9BQS8 1478 aa1.7□□□□□ -2.14
TTC3-213ENST00000469939 FANCD2Q9BXW9 1451 aa1.7□□□□□ -2.14
TTC3-213ENST00000469939 IGLV3-32A0A0A0MS00 114 aa1.7□□□□□ -2.14
TTC3-213ENST00000469939 TRAV17A0A0B4J275 112 aa1.7□□□□□ -2.14
TTC3-213ENST00000469939 SPAARA0A1B0GVQ0 90 aa1.7□□□□□ -2.14
TTC3-213ENST00000469939 TMEM30CPA0ZSE6 113 aa1.7□□□□□ -2.14
TTC3-213ENST00000469939 POLR2JP52435 117 aaKnown RBP1.7□□□□□ -2.14
TTC3-213ENST00000469939 CACNA1BQ00975 2339 aa1.7□□□□□ -2.14
TTC3-213ENST00000469939 GDF5OSQ5U4N7 250 aa1.7□□□□□ -2.14
TTC3-213ENST00000469939 LINC01545Q5VT33 79 aa1.7□□□□□ -2.14
TTC3-213ENST00000469939 PDCD10Q9BUL8 212 aa1.7□□□□□ -2.14
TTC3-213ENST00000469939 SNRNP25Q9BV90 132 aaKnown RBP1.7□□□□□ -2.14
TTC3-213ENST00000469939 UACAQ9BZF9 1416 aa1.7□□□□□ -2.14
TTC3-213ENST00000469939 ZGRF1Q86YA3 2104 aa1.7□□□□□ -2.14
TTC3-213ENST00000469939 GOLGA3Q08378 1498 aa1.69□□□□□ -2.14
TTC3-213ENST00000469939 IGKV3-7A0A075B6H7 116 aa1.69□□□□□ -2.14
TTC3-213ENST00000469939 J3QKU1 62 aa1.69□□□□□ -2.14
TTC3-213ENST00000469939 LYPD5Q6UWN5 251 aa1.69□□□□□ -2.14
TTC3-213ENST00000469939 TMEM131LA2VDJ0 1609 aa1.69□□□□□ -2.14
TTC3-213ENST00000469939 PHRF1Q9P1Y6 1649 aaKnown RBP1.69□□□□□ -2.14
TTC3-213ENST00000469939 FANCAO15360 1455 aa1.69□□□□□ -2.14
TTC3-213ENST00000469939 MED14O60244 1454 aa1.69□□□□□ -2.14
TTC3-213ENST00000469939 CCDC18Q5T9S5 1454 aa1.69□□□□□ -2.14
TTC3-213ENST00000469939 ARHGAP35Q9NRY4 1499 aa1.69□□□□□ -2.14
TTC3-213ENST00000469939 ATG2AQ2TAZ0 1938 aa1.68□□□□□ -2.14
TTC3-213ENST00000469939 TROQ12816 1431 aaPredicted RBP1.68□□□□□ -2.14
TTC3-213ENST00000469939 TRAV23DV6A0A075B6W5 121 aa1.68□□□□□ -2.14
TTC3-213ENST00000469939 IGKV2-40A0A087WW87 121 aaPredicted RBP1.68□□□□□ -2.14
TTC3-213ENST00000469939 TRAV2A0A0B4J234 112 aa1.68□□□□□ -2.14
TTC3-213ENST00000469939 NUPR2A6NF83 97 aa1.68□□□□□ -2.14
TTC3-213ENST00000469939 CCDC179H3BU77 68 aa1.68□□□□□ -2.14
TTC3-213ENST00000469939 IGKV2D-40P01614 121 aaPredicted RBP1.68□□□□□ -2.14
TTC3-213ENST00000469939 IGHV3-30P01768 117 aa1.68□□□□□ -2.14
TTC3-213ENST00000469939 IGHV3-30-5P0DP03 117 aa1.68□□□□□ -2.14
TTC3-213ENST00000469939 HIST1H1DP16402 221 aaKnown RBP1.68□□□□□ -2.14
TTC3-213ENST00000469939 PDE6GP18545 87 aa1.68□□□□□ -2.14
TTC3-213ENST00000469939 FGF7P21781 194 aa1.68□□□□□ -2.14
TTC3-213ENST00000469939 RBP2P50120 134 aa1.68□□□□□ -2.14
TTC3-213ENST00000469939 OCIAD2Q56VL3 154 aa1.68□□□□□ -2.14
TTC3-213ENST00000469939 NLRP1Q9C000 1473 aa1.68□□□□□ -2.14
TTC3-213ENST00000469939 WNK3Q9BYP7 1800 aa1.68□□□□□ -2.14
TTC3-213ENST00000469939 DAPK1P53355 1430 aa1.67□□□□□ -2.14
TTC3-213ENST00000469939 PLXNA2O75051 1894 aa1.67□□□□□ -2.14
TTC3-213ENST00000469939 TECTAO75443 2155 aa1.67□□□□□ -2.14
TTC3-213ENST00000469939 IFNA17P01571 189 aa1.67□□□□□ -2.14
TTC3-213ENST00000469939 TFF1P04155 84 aa1.67□□□□□ -2.14
TTC3-213ENST00000469939 TRAPPC2P0DI81 140 aa1.67□□□□□ -2.14
TTC3-213ENST00000469939 TRAPPC2BP0DI82 140 aa1.67□□□□□ -2.14
TTC3-213ENST00000469939 IL9P15248 144 aa1.67□□□□□ -2.14
TTC3-213ENST00000469939 IQCJQ1A5X6 159 aa1.67□□□□□ -2.14
TTC3-213ENST00000469939 UNQ5815/PRO19632Q6UWF5 114 aa1.67□□□□□ -2.14
TTC3-213ENST00000469939 PLPP5Q8NEB5 264 aa1.67□□□□□ -2.14
TTC3-213ENST00000469939 PPDPFLQ8WWR9 84 aa1.67□□□□□ -2.14
TTC3-213ENST00000469939 ODF3Q96PU9 254 aa1.67□□□□□ -2.14
TTC3-213ENST00000469939 SEC11CQ9BY50 192 aa1.67□□□□□ -2.14
TTC3-213ENST00000469939 AGPAT4-IT1Q9H0P7 198 aa1.67□□□□□ -2.14
TTC3-213ENST00000469939 SCN3BQ9NY72 215 aa1.67□□□□□ -2.14
TTC3-213ENST00000469939 MRPL36Q9P0J6 103 aaKnown RBP1.67□□□□□ -2.14
TTC3-213ENST00000469939 GNG8Q9UK08 70 aa1.67□□□□□ -2.14
TTC3-213ENST00000469939 C22orf24Q9Y442 160 aa1.67□□□□□ -2.14
TTC3-213ENST00000469939 PSME4Q14997 1843 aa1.67□□□□□ -2.14
TTC3-213ENST00000469939 KIF14Q15058 1648 aa1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms