RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 ZNF670-ZNF695F2Z2N8 137 aa-0.85□□□□□ -2.55
SMC4-207ENST00000467263 IFNA21P01568 189 aa-0.85□□□□□ -2.55
SMC4-207ENST00000467263 TRIQKQ629K1 86 aa-0.85□□□□□ -2.55
SMC4-207ENST00000467263 PTPRQQ9UMZ3 2332 aa-0.86□□□□□ -2.55
SMC4-207ENST00000467263 ZANQ9Y493 2812 aa-0.86□□□□□ -2.55
SMC4-207ENST00000467263 PCBD1P61457 104 aa-0.86□□□□□ -2.55
SMC4-207ENST00000467263 THEM6Q8WUY1 208 aa-0.86□□□□□ -2.55
SMC4-207ENST00000467263 WDR97A6NE52 1622 aa-0.86□□□□□ -2.55
SMC4-207ENST00000467263 A2MP01023 1474 aa-0.86□□□□□ -2.55
SMC4-207ENST00000467263 MUC2Q02817 5179 aa-0.86□□□□□ -2.55
SMC4-207ENST00000467263 PFDN1O60925 122 aa-0.87□□□□□ -2.55
SMC4-207ENST00000467263 FAM107AO95990 144 aa-0.87□□□□□ -2.55
SMC4-207ENST00000467263 ZCCHC11Q5TAX3 1644 aaKnown RBP-0.87□□□□□ -2.55
SMC4-207ENST00000467263 DCHS2Q6V1P9 2916 aa-0.87□□□□□ -2.55
SMC4-207ENST00000467263 DOCK11Q5JSL3 2073 aa-0.87□□□□□ -2.55
SMC4-207ENST00000467263 LRP2P98164 4655 aa-0.88□□□□□ -2.55
SMC4-207ENST00000467263 SLC25A5P05141 298 aaKnown RBP-0.88□□□□□ -2.55
SMC4-207ENST00000467263 RPL7P18124 248 aaKnown RBP-0.88□□□□□ -2.55
SMC4-207ENST00000467263 POLR2HP52434 150 aaKnown RBP-0.88□□□□□ -2.55
SMC4-207ENST00000467263 AKAP6Q13023 2319 aa-0.88□□□□□ -2.55
SMC4-207ENST00000467263 CXorf51AA0A1B0GTR3 108 aa-0.89□□□□□ -2.55
SMC4-207ENST00000467263 E7EQ34 232 aa-0.89□□□□□ -2.55
SMC4-207ENST00000467263 UQCRQO14949 82 aa-0.89□□□□□ -2.55
SMC4-207ENST00000467263 CFDP00746 253 aaPredicted RBP-0.89□□□□□ -2.55
SMC4-207ENST00000467263 G0S2P27469 103 aa-0.89□□□□□ -2.55
SMC4-207ENST00000467263 RPL22P35268 128 aaKnown RBP-0.89□□□□□ -2.55
SMC4-207ENST00000467263 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa-0.89□□□□□ -2.55
SMC4-207ENST00000467263 SMIM11BQ8TCY0 68 aa-0.89□□□□□ -2.55
SMC4-207ENST00000467263 DOPEY2Q9Y3R5 2298 aa-0.89□□□□□ -2.55
SMC4-207ENST00000467263 PNMA8CA0A1B0GUJ8 204 aa-0.9□□□□□ -2.55
SMC4-207ENST00000467263 PGRMC1O00264 195 aaKnown RBP-0.9□□□□□ -2.55
SMC4-207ENST00000467263 CDC26Q8NHZ8 85 aa-0.9□□□□□ -2.55
SMC4-207ENST00000467263 PPDPFLQ8WWR9 84 aa-0.9□□□□□ -2.55
SMC4-207ENST00000467263 SPTBN2O15020 2390 aa-0.9□□□□□ -2.55
SMC4-207ENST00000467263 SSC5DA1L4H1 1573 aa-0.91□□□□□ -2.55
SMC4-207ENST00000467263 TCRAP04437 139 aa-0.91□□□□□ -2.56
SMC4-207ENST00000467263 NDUFAF1Q9Y375 327 aa-0.91□□□□□ -2.56
SMC4-207ENST00000467263 PLXNA2O75051 1894 aa-0.92□□□□□ -2.56
SMC4-207ENST00000467263 ROCK1Q13464 1354 aa-0.92□□□□□ -2.56
SMC4-207ENST00000467263 TCRBV3S1A0A5B6 114 aa-0.92□□□□□ -2.56
SMC4-207ENST00000467263 APODP05090 189 aa-0.92□□□□□ -2.56
SMC4-207ENST00000467263 AKR1D1P51857 326 aa-0.92□□□□□ -2.56
SMC4-207ENST00000467263 VPS25Q9BRG1 176 aa-0.92□□□□□ -2.56
SMC4-207ENST00000467263 PCBD2Q9H0N5 130 aa-0.92□□□□□ -2.56
SMC4-207ENST00000467263 METTL1Q9UBP6 276 aaKnown RBP-0.92□□□□□ -2.56
SMC4-207ENST00000467263 COX4I1P13073 169 aa-0.93□□□□□ -2.56
SMC4-207ENST00000467263 GNG10P50151 68 aa-0.93□□□□□ -2.56
SMC4-207ENST00000467263 SLC25A26Q70HW3 274 aa-0.93□□□□□ -2.56
SMC4-207ENST00000467263 ATPIF1Q9UII2 106 aa-0.93□□□□□ -2.56
SMC4-207ENST00000467263 A0A087WTM6 91 aa-0.94□□□□□ -2.56
SMC4-207ENST00000467263 RBAKDNA6NC62 111 aa-0.94□□□□□ -2.56
SMC4-207ENST00000467263 PLGLB1Q02325 96 aa-0.94□□□□□ -2.56
SMC4-207ENST00000467263 OR2T2Q6IF00 324 aa-0.94□□□□□ -2.56
SMC4-207ENST00000467263 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.94□□□□□ -2.56
SMC4-207ENST00000467263 HIST1H1BP16401 226 aaKnown RBP-0.95□□□□□ -2.56
SMC4-207ENST00000467263 PSPHP78330 225 aa-0.95□□□□□ -2.56
SMC4-207ENST00000467263 HSD17B12Q53GQ0 312 aa-0.95□□□□□ -2.56
SMC4-207ENST00000467263 CYP2G1PQ6ZSU1 146 aa-0.95□□□□□ -2.56
SMC4-207ENST00000467263 CCDC115Q96NT0 180 aa-0.95□□□□□ -2.56
SMC4-207ENST00000467263 TMEM242Q9NWH2 141 aa-0.95□□□□□ -2.56
SMC4-207ENST00000467263 CASZ1Q86V15 1759 aa-0.96□□□□□ -2.56
SMC4-207ENST00000467263 KIF13AQ9H1H9 1805 aa-0.96□□□□□ -2.56
SMC4-207ENST00000467263 A0A1B0GW64 132 aa-0.96□□□□□ -2.56
SMC4-207ENST00000467263 E5RI56 91 aa-0.96□□□□□ -2.56
SMC4-207ENST00000467263 SLC35B3Q9H1N7 401 aa-0.96□□□□□ -2.56
SMC4-207ENST00000467263 TAS2R8Q9NYW2 309 aa-0.96□□□□□ -2.56
SMC4-207ENST00000467263 MED23Q9ULK4 1368 aa-0.96□□□□□ -2.56
SMC4-207ENST00000467263 PLXNA1Q9UIW2 1896 aa-0.97□□□□□ -2.56
SMC4-207ENST00000467263 ARHGAP31Q2M1Z3 1444 aa-0.97□□□□□ -2.56
SMC4-207ENST00000467263 PKDREJQ9NTG1 2253 aa-0.98□□□□□ -2.57
SMC4-207ENST00000467263 CHD6Q8TD26 2715 aa-0.98□□□□□ -2.57
SMC4-207ENST00000467263 TRBV7-1A0A0A6YYK4 115 aa-0.98□□□□□ -2.57
SMC4-207ENST00000467263 SLC25A6P12236 298 aa-0.98□□□□□ -2.57
SMC4-207ENST00000467263 C4orf33Q8N1A6 199 aa-0.98□□□□□ -2.57
SMC4-207ENST00000467263 OR9Q1Q8NGQ5 310 aa-0.98□□□□□ -2.57
SMC4-207ENST00000467263 IFI27L1Q96BM0 104 aa-0.98□□□□□ -2.57
SMC4-207ENST00000467263 Q96NJ1 140 aa-0.98□□□□□ -2.57
SMC4-207ENST00000467263 AKAP11Q9UKA4 1901 aa-0.98□□□□□ -2.57
SMC4-207ENST00000467263 LPAP08519 4548 aa-0.98□□□□□ -2.57
SMC4-207ENST00000467263 ZNF142P52746 1687 aaPredicted RBP-0.98□□□□□ -2.57
SMC4-207ENST00000467263 MYCBP2O75592 4640 aa-0.98□□□□□ -2.57
SMC4-207ENST00000467263 ACYP2P14621 99 aa-0.99□□□□□ -2.57
SMC4-207ENST00000467263 CCL3L1P16619 93 aa-0.99□□□□□ -2.57
SMC4-207ENST00000467263 OR8B8Q15620 311 aa-0.99□□□□□ -2.57
SMC4-207ENST00000467263 Q6ZRX8 168 aa-0.99□□□□□ -2.57
SMC4-207ENST00000467263 CCDC171Q6TFL3 1326 aa-0.99□□□□□ -2.57
SMC4-207ENST00000467263 LAMB1P07942 1786 aa-0.99□□□□□ -2.57
SMC4-207ENST00000467263 KDM5CP41229 1560 aa-1□□□□□ -2.57
SMC4-207ENST00000467263 PPP1R2P3Q6NXS1 205 aa-1□□□□□ -2.57
SMC4-207ENST00000467263 DYNLRB2Q8TF09 96 aa-1□□□□□ -2.57
SMC4-207ENST00000467263 SRRM2Q9UQ35 2752 aaKnown RBP-1.01□□□□□ -2.57
SMC4-207ENST00000467263 VWFP04275 2813 aa-1.01□□□□□ -2.57
SMC4-207ENST00000467263 TRAV2A0A0B4J234 112 aa-1.01□□□□□ -2.57
SMC4-207ENST00000467263 SSBP1Q04837 148 aaKnown RBP-1.01□□□□□ -2.57
SMC4-207ENST00000467263 SAMD13Q5VXD3 122 aa-1.01□□□□□ -2.57
SMC4-207ENST00000467263 SNX29P2Q8IUI4 249 aa-1.01□□□□□ -2.57
SMC4-207ENST00000467263 TMEM35BQ8NCS4 154 aa-1.01□□□□□ -2.57
SMC4-207ENST00000467263 HECTD4Q9Y4D8 3996 aa-1.01□□□□□ -2.57
SMC4-207ENST00000467263 TENM2Q9NT68 2774 aa-1.01□□□□□ -2.57
SMC4-207ENST00000467263 TNXBP22105 4242 aa-1.02□□□□□ -2.57
Retrieved 100 of 20,778 RNA–protein pairs in 165.9 ms