RNA–Protein interactions for RNA: ENST00000465525.6

PTPRU-206, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 1,650 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-206ENST00000465525 SPATA25Q9BR10 227 aa12.4□□□□□ -0.42
PTPRU-206ENST00000465525 ZNF415Q09FC8 603 aa12.39□□□□□ -0.43
PTPRU-206ENST00000465525 OR10AG1Q8NH19 301 aa12.39□□□□□ -0.43
PTPRU-206ENST00000465525 YPEL4Q96NS1 127 aa12.39□□□□□ -0.43
PTPRU-206ENST00000465525 GFRA4Q9GZZ7 299 aa12.39□□□□□ -0.43
PTPRU-206ENST00000465525 NAT8BQ9UHF3 227 aa12.39□□□□□ -0.43
PTPRU-206ENST00000465525 A0A1W2PPQ1 181 aa12.38□□□□□ -0.43
PTPRU-206ENST00000465525 CXCL1P09341 107 aa12.38□□□□□ -0.43
PTPRU-206ENST00000465525 NHLRC4P0CG21 123 aaPredicted RBP12.38□□□□□ -0.43
PTPRU-206ENST00000465525 DNLZQ5SXM8 178 aa12.38□□□□□ -0.43
PTPRU-206ENST00000465525 TMEM263Q8WUH6 116 aaKnown RBP12.38□□□□□ -0.43
PTPRU-206ENST00000465525 C9orf85Q96MD7 179 aa12.38□□□□□ -0.43
PTPRU-206ENST00000465525 ZMAT4Q9H898 229 aa12.38□□□□□ -0.43
PTPRU-206ENST00000465525 IGHV4-28A0A0C4DH34 117 aa12.38□□□□□ -0.43
PTPRU-206ENST00000465525 PLAC8L1A1L4L8 177 aa12.38□□□□□ -0.43
PTPRU-206ENST00000465525 TGIF2-C20orf24A0A0A6YYL0 155 aa12.37□□□□□ -0.43
PTPRU-206ENST00000465525 S100PP25815 95 aa12.37□□□□□ -0.43
PTPRU-206ENST00000465525 CTRLP40313 264 aa12.37□□□□□ -0.43
PTPRU-206ENST00000465525 MRPL54Q6P161 138 aaKnown RBP12.37□□□□□ -0.43
PTPRU-206ENST00000465525 KCNIP4Q6PIL6 250 aa12.37□□□□□ -0.43
PTPRU-206ENST00000465525 C16orf74Q96GX8 76 aa12.37□□□□□ -0.43
PTPRU-206ENST00000465525 PHLDA3Q9Y5J5 127 aa12.37□□□□□ -0.43
PTPRU-206ENST00000465525 M0R381 172 aa12.36□□□□□ -0.43
PTPRU-206ENST00000465525 SNAI2O43623 268 aa12.36□□□□□ -0.43
PTPRU-206ENST00000465525 OR5AL1P0C617 328 aa12.36□□□□□ -0.43
PTPRU-206ENST00000465525 FOXA3P55318 350 aaPredicted RBP12.36□□□□□ -0.43
PTPRU-206ENST00000465525 ELOBQ15370 118 aa12.36□□□□□ -0.43
PTPRU-206ENST00000465525 IMMP2LQ96T52 175 aa12.36□□□□□ -0.43
PTPRU-206ENST00000465525 SSBP4Q9BWG4 385 aaPredicted RBP12.36□□□□□ -0.43
PTPRU-206ENST00000465525 NOP10Q9NPE3 64 aaKnown RBP12.36□□□□□ -0.43
PTPRU-206ENST00000465525 SCRT2Q9NQ03 307 aa12.36□□□□□ -0.43
PTPRU-206ENST00000465525 MSRB1Q9NZV6 116 aa12.36□□□□□ -0.43
PTPRU-206ENST00000465525 TENM3Q9P273 2699 aa12.36□□□□□ -0.43
PTPRU-206ENST00000465525 FAM231BA6NCW3 169 aa12.35□□□□□ -0.43
PTPRU-206ENST00000465525 SMIM9A6NGZ8 99 aa12.35□□□□□ -0.43
PTPRU-206ENST00000465525 SNURFLB1AK76 121 aa12.35□□□□□ -0.43
PTPRU-206ENST00000465525 Q8NAQ8 132 aa12.35□□□□□ -0.43
PTPRU-206ENST00000465525 MRPL16Q9NX20 251 aaKnown RBP12.35□□□□□ -0.43
PTPRU-206ENST00000465525 MED14OSP0DP75 135 aa12.35□□□□□ -0.43
PTPRU-206ENST00000465525 SPANXN1Q5VSR9 72 aa12.35□□□□□ -0.43
PTPRU-206ENST00000465525 DMRTA1Q5VZB9 504 aa12.35□□□□□ -0.43
PTPRU-206ENST00000465525 ZNF493Q6ZR52 646 aa12.35□□□□□ -0.43
PTPRU-206ENST00000465525 IL17DQ8TAD2 202 aa12.35□□□□□ -0.43
PTPRU-206ENST00000465525 PRKDCP78527 4128 aaKnown RBP12.34□□□□□ -0.43
PTPRU-206ENST00000465525 F2Z2F3 143 aa12.34□□□□□ -0.43
PTPRU-206ENST00000465525 A0A1B0GUT8 65 aa12.33□□□□□ -0.44
PTPRU-206ENST00000465525 MIFP14174 115 aa12.33□□□□□ -0.44
PTPRU-206ENST00000465525 NTF3P20783 257 aa12.33□□□□□ -0.44
PTPRU-206ENST00000465525 TWIST1Q15672 202 aa12.33□□□□□ -0.44
PTPRU-206ENST00000465525 BORCS7Q96B45 105 aa12.33□□□□□ -0.44
PTPRU-206ENST00000465525 TRBV24-1A0A075B6N3 115 aa12.32□□□□□ -0.44
PTPRU-206ENST00000465525 TRGV1A0A0A0MS02 117 aa12.32□□□□□ -0.44
PTPRU-206ENST00000465525 RPS10P46783 165 aaKnown RBP12.32□□□□□ -0.44
PTPRU-206ENST00000465525 CAMPP49913 170 aa12.32□□□□□ -0.44
PTPRU-206ENST00000465525 ZNF876PQ49A33 203 aa12.32□□□□□ -0.44
PTPRU-206ENST00000465525 Q6ZTI0 123 aa12.32□□□□□ -0.44
PTPRU-206ENST00000465525 BTF3L4Q96K17 158 aa12.32□□□□□ -0.44
PTPRU-206ENST00000465525 JPT2Q9H910 190 aa12.32□□□□□ -0.44
PTPRU-206ENST00000465525 M0R2P5 195 aa12.32□□□□□ -0.44
PTPRU-206ENST00000465525 SPXQ9BT56 116 aa12.32□□□□□ -0.44
PTPRU-206ENST00000465525 CACNG7P62955 275 aa12.31□□□□□ -0.44
PTPRU-206ENST00000465525 RIGQ13278 110 aa12.31□□□□□ -0.44
PTPRU-206ENST00000465525 ZFP82Q8N141 532 aa12.31□□□□□ -0.44
PTPRU-206ENST00000465525 FAM210BQ96KR6 192 aa12.31□□□□□ -0.44
PTPRU-206ENST00000465525 CNFNQ9BYD5 112 aa12.31□□□□□ -0.44
PTPRU-206ENST00000465525 DNAH9Q9NYC9 4486 aa12.3□□□□□ -0.44
PTPRU-206ENST00000465525 S100A6P06703 90 aa12.3□□□□□ -0.44
PTPRU-206ENST00000465525 DAZ2Q13117 558 aaKnown RBP12.3□□□□□ -0.44
PTPRU-206ENST00000465525 SYT8Q8NBV8 401 aa12.3□□□□□ -0.44
PTPRU-206ENST00000465525 CELA1Q9UNI1 258 aa12.3□□□□□ -0.44
PTPRU-206ENST00000465525 COL7A1Q02388 2944 aa12.3□□□□□ -0.44
PTPRU-206ENST00000465525 A0A1B0GXF2 115 aa12.29□□□□□ -0.44
PTPRU-206ENST00000465525 GAGE12BA1L429 117 aa12.29□□□□□ -0.44
PTPRU-206ENST00000465525 GAGE7O76087 117 aa12.29□□□□□ -0.44
PTPRU-206ENST00000465525 NXPH4O95158 308 aa12.29□□□□□ -0.44
PTPRU-206ENST00000465525 GAGE12FP0CL80 117 aa12.29□□□□□ -0.44
PTPRU-206ENST00000465525 GAGE12GP0CL81 117 aa12.29□□□□□ -0.44
PTPRU-206ENST00000465525 GAGE12IP0CL82 117 aa12.29□□□□□ -0.44
PTPRU-206ENST00000465525 FAM222AQ5U5X8 452 aa12.29□□□□□ -0.44
PTPRU-206ENST00000465525 NACAE9PAV3 2078 aa12.29□□□□□ -0.44
PTPRU-206ENST00000465525 IGHV4-4A0A075B6R2 117 aa12.29□□□□□ -0.44
PTPRU-206ENST00000465525 TRAV9-1A0A075B6T8 112 aa12.29□□□□□ -0.44
PTPRU-206ENST00000465525 A0A0J9YWU9 116 aa12.29□□□□□ -0.44
PTPRU-206ENST00000465525 DEFB130BP0DP73 79 aa12.29□□□□□ -0.44
PTPRU-206ENST00000465525 DEFB130AP0DP74 79 aa12.29□□□□□ -0.44
PTPRU-206ENST00000465525 RAB4BP61018 213 aa12.29□□□□□ -0.44
PTPRU-206ENST00000465525 HBBP68871 147 aa12.29□□□□□ -0.44
PTPRU-206ENST00000465525 A0A087WWL8 130 aa12.28□□□□□ -0.44
PTPRU-206ENST00000465525 EVI2AP22794 236 aa12.28□□□□□ -0.44
PTPRU-206ENST00000465525 WDR73Q6P4I2 378 aa12.28□□□□□ -0.44
PTPRU-206ENST00000465525 C14orf178Q8N769 122 aaPredicted RBP12.27□□□□□ -0.45
PTPRU-206ENST00000465525 SAMD10Q9BYL1 202 aa12.27□□□□□ -0.45
PTPRU-206ENST00000465525 DKK2Q9UBU2 259 aa12.27□□□□□ -0.45
PTPRU-206ENST00000465525 ATP5L2Q7Z4Y8 100 aa12.26□□□□□ -0.45
PTPRU-206ENST00000465525 RASL10AQ92737 203 aa12.26□□□□□ -0.45
PTPRU-206ENST00000465525 IGHV3-73A0A0B4J1V6 119 aa12.26□□□□□ -0.45
PTPRU-206ENST00000465525 IGHV3-53P01767 116 aa12.26□□□□□ -0.45
PTPRU-206ENST00000465525 FAM74A4Q5TZK3 123 aa12.26□□□□□ -0.45
PTPRU-206ENST00000465525 C11orf68Q9H3H3 251 aaKnown RBP12.26□□□□□ -0.45
PTPRU-206ENST00000465525 U3KQK5 164 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms