RNA–Protein interactions for RNA: ENST00000461047.2

NUP98-208, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-208ENST00000461047 BORCS7Q96B45 105 aa4.29□□□□□ -1.72
NUP98-208ENST00000461047 ZC2HC1AQ96GY0 325 aa4.29□□□□□ -1.72
NUP98-208ENST00000461047 C11orf68Q9H3H3 251 aaKnown RBP4.29□□□□□ -1.72
NUP98-208ENST00000461047 A0A1W2PPQ1 181 aa4.28□□□□□ -1.72
NUP98-208ENST00000461047 TMEM218A2RU14 115 aa4.28□□□□□ -1.72
NUP98-208ENST00000461047 A8MWL6 223 aa4.28□□□□□ -1.72
NUP98-208ENST00000461047 KRBOX1C9JBD0 128 aa4.28□□□□□ -1.72
NUP98-208ENST00000461047 F2Z2F3 143 aa4.28□□□□□ -1.72
NUP98-208ENST00000461047 GATCO43716 136 aaKnown RBP4.28□□□□□ -1.72
NUP98-208ENST00000461047 MT-ND4LP03901 98 aa4.28□□□□□ -1.72
NUP98-208ENST00000461047 MALP21145 153 aa4.28□□□□□ -1.72
NUP98-208ENST00000461047 DAZ2Q13117 558 aaKnown RBP4.28□□□□□ -1.72
NUP98-208ENST00000461047 ADIRFQ15847 76 aa4.28□□□□□ -1.72
NUP98-208ENST00000461047 FAM231DQ6ZW35 169 aa4.28□□□□□ -1.72
NUP98-208ENST00000461047 OR2D3Q8NGH3 330 aa4.28□□□□□ -1.72
NUP98-208ENST00000461047 OR10G8Q8NGN5 311 aa4.28□□□□□ -1.72
NUP98-208ENST00000461047 C11orf45Q8TAV5 145 aa4.28□□□□□ -1.72
NUP98-208ENST00000461047 SEC11CQ9BY50 192 aa4.28□□□□□ -1.72
NUP98-208ENST00000461047 OSTCQ9NRP0 149 aa4.28□□□□□ -1.72
NUP98-208ENST00000461047 PHLDA3Q9Y5J5 127 aa4.28□□□□□ -1.72
NUP98-208ENST00000461047 TRGV2A0A075B6R0 118 aa4.27□□□□□ -1.73
NUP98-208ENST00000461047 M0R036 132 aa4.27□□□□□ -1.73
NUP98-208ENST00000461047 M0R2P5 195 aa4.27□□□□□ -1.73
NUP98-208ENST00000461047 GNRH2O43555 120 aa4.27□□□□□ -1.73
NUP98-208ENST00000461047 CIDEAO60543 219 aa4.27□□□□□ -1.73
NUP98-208ENST00000461047 CXCL1P09341 107 aa4.27□□□□□ -1.73
NUP98-208ENST00000461047 CRIP1P50238 77 aa4.27□□□□□ -1.73
NUP98-208ENST00000461047 ZNF80P51504 273 aaPredicted RBP4.27□□□□□ -1.73
NUP98-208ENST00000461047 TCL1AP56279 114 aa4.27□□□□□ -1.73
NUP98-208ENST00000461047 DAD1P61803 113 aa4.27□□□□□ -1.73
NUP98-208ENST00000461047 LGALS9BQ3B8N2 356 aa4.27□□□□□ -1.73
NUP98-208ENST00000461047 DNLZQ5SXM8 178 aa4.27□□□□□ -1.73
NUP98-208ENST00000461047 PRR9Q5T870 116 aa4.27□□□□□ -1.73
NUP98-208ENST00000461047 SMIM15Q7Z3B0 74 aa4.27□□□□□ -1.73
NUP98-208ENST00000461047 LINC01551Q86U37 167 aa4.27□□□□□ -1.73
NUP98-208ENST00000461047 NDUFAF3Q9BU61 184 aa4.27□□□□□ -1.73
NUP98-208ENST00000461047 RPP21Q9H633 154 aaKnown RBP4.27□□□□□ -1.73
NUP98-208ENST00000461047 RETNQ9HD89 108 aa4.27□□□□□ -1.73
NUP98-208ENST00000461047 NOP10Q9NPE3 64 aaKnown RBP4.27□□□□□ -1.73
NUP98-208ENST00000461047 GSN-AS1Q9NRJ2 163 aa4.27□□□□□ -1.73
NUP98-208ENST00000461047 TP53TG3Q9ULZ0 132 aa4.27□□□□□ -1.73
NUP98-208ENST00000461047 VWFP04275 2813 aa4.27□□□□□ -1.73
NUP98-208ENST00000461047 TRBV20OR9-2A0A075B6H5 130 aa4.26□□□□□ -1.73
NUP98-208ENST00000461047 TMSB15BA0A087X1C1 80 aa4.26□□□□□ -1.73
NUP98-208ENST00000461047 TRGV1A0A0A0MS02 117 aa4.26□□□□□ -1.73
NUP98-208ENST00000461047 IGHV3-16A0A0C4DH30 117 aa4.26□□□□□ -1.73
NUP98-208ENST00000461047 A0A0J9YWU9 116 aa4.26□□□□□ -1.73
NUP98-208ENST00000461047 GRIFINA4D1Z8 144 aa4.26□□□□□ -1.73
NUP98-208ENST00000461047 C19orf71A6NCJ1 209 aa4.26□□□□□ -1.73
NUP98-208ENST00000461047 FAM231BA6NCW3 169 aa4.26□□□□□ -1.73
NUP98-208ENST00000461047 PGPEP1LA6NFU8 196 aa4.26□□□□□ -1.73
NUP98-208ENST00000461047 C9JQL5 133 aa4.26□□□□□ -1.73
NUP98-208ENST00000461047 SNAPINO95295 136 aa4.26□□□□□ -1.73
NUP98-208ENST00000461047 IGLV2-8P01709 118 aa4.26□□□□□ -1.73
NUP98-208ENST00000461047 TYMSP04818 313 aa4.26□□□□□ -1.73
NUP98-208ENST00000461047 ARMS2P0C7Q2 107 aa4.26□□□□□ -1.73
NUP98-208ENST00000461047 RBMY1A1P0DJD3 496 aaKnown RBP4.26□□□□□ -1.73
NUP98-208ENST00000461047 RBMY1CP0DJD4 496 aa4.26□□□□□ -1.73
NUP98-208ENST00000461047 DEFB130BP0DP73 79 aa4.26□□□□□ -1.73
NUP98-208ENST00000461047 DEFB130AP0DP74 79 aa4.26□□□□□ -1.73
NUP98-208ENST00000461047 AZU1P20160 251 aa4.26□□□□□ -1.73
NUP98-208ENST00000461047 RPL23P62829 140 aaKnown RBP4.26□□□□□ -1.73
NUP98-208ENST00000461047 CACNG7P62955 275 aa4.26□□□□□ -1.73
NUP98-208ENST00000461047 SLAQ13239 276 aa4.26□□□□□ -1.73
NUP98-208ENST00000461047 RBMY1FQ15415 496 aaKnown RBP4.26□□□□□ -1.73
NUP98-208ENST00000461047 PIK3CD-AS1Q5SR53 167 aa4.26□□□□□ -1.73
NUP98-208ENST00000461047 SPANXN1Q5VSR9 72 aa4.26□□□□□ -1.73
NUP98-208ENST00000461047 ZFP82Q8N141 532 aa4.26□□□□□ -1.73
NUP98-208ENST00000461047 SVBPQ8N300 66 aa4.26□□□□□ -1.73
NUP98-208ENST00000461047 FER1L6-AS1Q8NA97 138 aa4.26□□□□□ -1.73
NUP98-208ENST00000461047 Q8NAQ8 132 aa4.26□□□□□ -1.73
NUP98-208ENST00000461047 RNASE8Q8TDE3 154 aaKnown RBP4.26□□□□□ -1.73
NUP98-208ENST00000461047 PTH2Q96A98 100 aa4.26□□□□□ -1.73
NUP98-208ENST00000461047 ISOC2Q96AB3 205 aa4.26□□□□□ -1.73
NUP98-208ENST00000461047 SFRP2Q96HF1 295 aa4.26□□□□□ -1.73
NUP98-208ENST00000461047 CTDSP1Q9GZU7 261 aa4.26□□□□□ -1.73
NUP98-208ENST00000461047 GFRA4Q9GZZ7 299 aa4.26□□□□□ -1.73
NUP98-208ENST00000461047 IL36BQ9NZH7 164 aa4.26□□□□□ -1.73
NUP98-208ENST00000461047 IGKV3D-20A0A0C4DH25 116 aa4.25□□□□□ -1.73
NUP98-208ENST00000461047 A8MWV9 139 aa4.25□□□□□ -1.73
NUP98-208ENST00000461047 DEFB4AO15263 64 aa4.25□□□□□ -1.73
NUP98-208ENST00000461047 S100A8P05109 93 aa4.25□□□□□ -1.73
NUP98-208ENST00000461047 ATP5G1P05496 136 aa4.25□□□□□ -1.73
NUP98-208ENST00000461047 OR5AL1P0C617 328 aa4.25□□□□□ -1.73
NUP98-208ENST00000461047 SMIM17P0DL12 118 aa4.25□□□□□ -1.73
NUP98-208ENST00000461047 S100PP25815 95 aa4.25□□□□□ -1.73
NUP98-208ENST00000461047 ZNF876PQ49A33 203 aa4.25□□□□□ -1.73
NUP98-208ENST00000461047 FAM222AQ5U5X8 452 aa4.25□□□□□ -1.73
NUP98-208ENST00000461047 WDR73Q6P4I2 378 aa4.25□□□□□ -1.73
NUP98-208ENST00000461047 TSKUQ8WUA8 353 aa4.25□□□□□ -1.73
NUP98-208ENST00000461047 BTF3L4Q96K17 158 aa4.25□□□□□ -1.73
NUP98-208ENST00000461047 TPPP3Q9BW30 176 aa4.25□□□□□ -1.73
NUP98-208ENST00000461047 RNASE7Q9H1E1 156 aaKnown RBP4.25□□□□□ -1.73
NUP98-208ENST00000461047 MDFICQ9P1T7 246 aa4.25□□□□□ -1.73
NUP98-208ENST00000461047 KLK5Q9Y337 293 aaPredicted RBP4.25□□□□□ -1.73
NUP98-208ENST00000461047 NOTCH1P46531 2555 aa4.24□□□□□ -1.73
NUP98-208ENST00000461047 TRAV10A0A0B4J240 114 aa4.24□□□□□ -1.73
NUP98-208ENST00000461047 A0A1B0GW15 77 aa4.24□□□□□ -1.73
NUP98-208ENST00000461047 H3BVH4 76 aa4.24□□□□□ -1.73
NUP98-208ENST00000461047 K7EN84 100 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms