RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 FER1L6-AS1Q8NA97 138 aa9.12□□□□□ -0.95
SCLT1-202ENST00000439369 RETNQ9HD89 108 aa9.12□□□□□ -0.95
SCLT1-202ENST00000439369 GSN-AS1Q9NRJ2 163 aa9.12□□□□□ -0.95
SCLT1-202ENST00000439369 MDFICQ9P1T7 246 aa9.12□□□□□ -0.95
SCLT1-202ENST00000439369 CXorf65A6NEN9 183 aa9.11□□□□□ -0.95
SCLT1-202ENST00000439369 LYRM9A8MSI8 78 aa9.11□□□□□ -0.95
SCLT1-202ENST00000439369 ATP6V1G1O75348 118 aa9.11□□□□□ -0.95
SCLT1-202ENST00000439369 CNFNQ9BYD5 112 aa9.11□□□□□ -0.95
SCLT1-202ENST00000439369 RPS10P5Q9NQ39 176 aa9.11□□□□□ -0.95
SCLT1-202ENST00000439369 NAT8BQ9UHF3 227 aa9.11□□□□□ -0.95
SCLT1-202ENST00000439369 TRAV9-1A0A075B6T8 112 aa9.1□□□□□ -0.95
SCLT1-202ENST00000439369 H3BVH4 76 aa9.1□□□□□ -0.95
SCLT1-202ENST00000439369 M0R2P5 195 aa9.1□□□□□ -0.95
SCLT1-202ENST00000439369 NXPH4O95158 308 aa9.1□□□□□ -0.95
SCLT1-202ENST00000439369 GZMBP10144 247 aa9.1□□□□□ -0.95
SCLT1-202ENST00000439369 CACNG7P62955 275 aa9.1□□□□□ -0.95
SCLT1-202ENST00000439369 ZFP82Q8N141 532 aa9.1□□□□□ -0.95
SCLT1-202ENST00000439369 SYT8Q8NBV8 401 aa9.1□□□□□ -0.95
SCLT1-202ENST00000439369 GTSF1Q8WW33 167 aa9.1□□□□□ -0.95
SCLT1-202ENST00000439369 PHLDA3Q9Y5J5 127 aa9.1□□□□□ -0.95
SCLT1-202ENST00000439369 IGHV4-4A0A075B6R2 117 aa9.09□□□□□ -0.95
SCLT1-202ENST00000439369 HIGD1CA8MV81 97 aa9.09□□□□□ -0.95
SCLT1-202ENST00000439369 SPINK4O60575 86 aa9.09□□□□□ -0.95
SCLT1-202ENST00000439369 PRM2P04554 102 aa9.09□□□□□ -0.95
SCLT1-202ENST00000439369 KCNIP4Q6PIL6 250 aa9.09□□□□□ -0.95
SCLT1-202ENST00000439369 LINC00612Q8N6U2 182 aa9.09□□□□□ -0.95
SCLT1-202ENST00000439369 RASL10AQ92737 203 aa9.09□□□□□ -0.95
SCLT1-202ENST00000439369 BORCS7Q96B45 105 aa9.09□□□□□ -0.95
SCLT1-202ENST00000439369 MEGF8Q7Z7M0 2845 aa9.09□□□□□ -0.96
SCLT1-202ENST00000439369 A0A1B0GW15 77 aa9.08□□□□□ -0.96
SCLT1-202ENST00000439369 SPART-AS1P0CW21 52 aa9.08□□□□□ -0.96
SCLT1-202ENST00000439369 S100PP25815 95 aa9.08□□□□□ -0.96
SCLT1-202ENST00000439369 LYZL1Q6UWQ5 148 aa9.08□□□□□ -0.96
SCLT1-202ENST00000439369 BTF3L4Q96K17 158 aa9.08□□□□□ -0.96
SCLT1-202ENST00000439369 C18orf15Q96N68 181 aa9.08□□□□□ -0.96
SCLT1-202ENST00000439369 NOP10Q9NPE3 64 aaKnown RBP9.08□□□□□ -0.96
SCLT1-202ENST00000439369 DKK2Q9UBU2 259 aa9.08□□□□□ -0.96
SCLT1-202ENST00000439369 A0A1B0GUT8 65 aa9.07□□□□□ -0.96
SCLT1-202ENST00000439369 CIDEAO60543 219 aa9.07□□□□□ -0.96
SCLT1-202ENST00000439369 ZNF876PQ49A33 203 aa9.07□□□□□ -0.96
SCLT1-202ENST00000439369 SPANXN1Q5VSR9 72 aa9.07□□□□□ -0.96
SCLT1-202ENST00000439369 ATP5L2Q7Z4Y8 100 aa9.07□□□□□ -0.96
SCLT1-202ENST00000439369 NUP35Q8NFH5 326 aa9.07□□□□□ -0.96
SCLT1-202ENST00000439369 TPPP3Q9BW30 176 aa9.07□□□□□ -0.96
SCLT1-202ENST00000439369 S100A8P05109 93 aa9.06□□□□□ -0.96
SCLT1-202ENST00000439369 EMP1P54849 157 aa9.06□□□□□ -0.96
SCLT1-202ENST00000439369 RIGQ13278 110 aa9.06□□□□□ -0.96
SCLT1-202ENST00000439369 FAM222AQ5U5X8 452 aa9.06□□□□□ -0.96
SCLT1-202ENST00000439369 ATRAIDQ6UW56 229 aa9.06□□□□□ -0.96
SCLT1-202ENST00000439369 OR10AG1Q8NH19 301 aa9.06□□□□□ -0.96
SCLT1-202ENST00000439369 PGLYRP4Q96LB8 373 aa9.06□□□□□ -0.96
SCLT1-202ENST00000439369 SMCO4Q9NRQ5 59 aa9.06□□□□□ -0.96
SCLT1-202ENST00000439369 U3KQK5 164 aa9.06□□□□□ -0.96
SCLT1-202ENST00000439369 TRGV1A0A0A0MS02 117 aa9.05□□□□□ -0.96
SCLT1-202ENST00000439369 A0A0J9YWU9 116 aa9.05□□□□□ -0.96
SCLT1-202ENST00000439369 A8MWV9 139 aa9.05□□□□□ -0.96
SCLT1-202ENST00000439369 M0R381 172 aa9.05□□□□□ -0.96
SCLT1-202ENST00000439369 TRGC1P0CF51 173 aa9.05□□□□□ -0.96
SCLT1-202ENST00000439369 RASL11AQ6T310 242 aa9.05□□□□□ -0.96
SCLT1-202ENST00000439369 AP1S3Q96PC3 154 aa9.05□□□□□ -0.96
SCLT1-202ENST00000439369 MRPL16Q9NX20 251 aaKnown RBP9.05□□□□□ -0.96
SCLT1-202ENST00000439369 DEFB4AO15263 64 aa9.04□□□□□ -0.96
SCLT1-202ENST00000439369 NTF3P20783 257 aa9.04□□□□□ -0.96
SCLT1-202ENST00000439369 DMRTA1Q5VZB9 504 aa9.04□□□□□ -0.96
SCLT1-202ENST00000439369 Q6ZTI0 123 aa9.04□□□□□ -0.96
SCLT1-202ENST00000439369 TRAV4A0A0B4J268 109 aa9.03□□□□□ -0.96
SCLT1-202ENST00000439369 RHODO00212 210 aa9.03□□□□□ -0.96
SCLT1-202ENST00000439369 RS1O15537 224 aa9.03□□□□□ -0.96
SCLT1-202ENST00000439369 FAM3BP58499 235 aaPredicted RBP9.03□□□□□ -0.96
SCLT1-202ENST00000439369 DAD1P61803 113 aa9.03□□□□□ -0.96
SCLT1-202ENST00000439369 TWIST1Q15672 202 aa9.03□□□□□ -0.96
SCLT1-202ENST00000439369 ZFP2Q6ZN57 461 aa9.03□□□□□ -0.96
SCLT1-202ENST00000439369 SMIM15Q7Z3B0 74 aa9.03□□□□□ -0.96
SCLT1-202ENST00000439369 TRBV24-1A0A075B6N3 115 aa9.02□□□□□ -0.97
SCLT1-202ENST00000439369 TRGV2A0A075B6R0 118 aa9.02□□□□□ -0.97
SCLT1-202ENST00000439369 A0A1B0GXF2 115 aa9.02□□□□□ -0.97
SCLT1-202ENST00000439369 GAGE12BA1L429 117 aa9.02□□□□□ -0.97
SCLT1-202ENST00000439369 GAGE7O76087 117 aa9.02□□□□□ -0.97
SCLT1-202ENST00000439369 GAGE12FP0CL80 117 aa9.02□□□□□ -0.97
SCLT1-202ENST00000439369 GAGE12GP0CL81 117 aa9.02□□□□□ -0.97
SCLT1-202ENST00000439369 GAGE12IP0CL82 117 aa9.02□□□□□ -0.97
SCLT1-202ENST00000439369 HBBP68871 147 aa9.02□□□□□ -0.97
SCLT1-202ENST00000439369 COX19Q49B96 90 aa9.02□□□□□ -0.97
SCLT1-202ENST00000439369 GATD1Q8NB37 220 aa9.02□□□□□ -0.97
SCLT1-202ENST00000439369 C11orf45Q8TAV5 145 aa9.02□□□□□ -0.97
SCLT1-202ENST00000439369 CELA1Q9UNI1 258 aa9.02□□□□□ -0.97
SCLT1-202ENST00000439369 FBN3Q75N90 2809 aa9.01□□□□□ -0.97
SCLT1-202ENST00000439369 DEFB130BP0DP73 79 aa9.01□□□□□ -0.97
SCLT1-202ENST00000439369 DEFB130AP0DP74 79 aa9.01□□□□□ -0.97
SCLT1-202ENST00000439369 CFAP126Q5VTH2 177 aa9.01□□□□□ -0.97
SCLT1-202ENST00000439369 OR4C5Q8NGB2 326 aa9.01□□□□□ -0.97
SCLT1-202ENST00000439369 FRZBQ92765 325 aa9.01□□□□□ -0.97
SCLT1-202ENST00000439369 TMEM191AQ9H0A3 160 aa9.01□□□□□ -0.97
SCLT1-202ENST00000439369 EDA2RQ9HAV5 297 aa9.01□□□□□ -0.97
SCLT1-202ENST00000439369 URGCP-MRPS24S4R325 110 aa9.01□□□□□ -0.97
SCLT1-202ENST00000439369 MUC4Q99102 2169 aa9□□□□□ -0.97
SCLT1-202ENST00000439369 NBEAL2Q6ZNJ1 2754 aa9□□□□□ -0.97
SCLT1-202ENST00000439369 MUC21A0A0G2JKD1 596 aa9□□□□□ -0.97
SCLT1-202ENST00000439369 MUC21A0A140T8X8 626 aa9□□□□□ -0.97
SCLT1-202ENST00000439369 ATP5G1P05496 136 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms